BAYESIAN OPTIMAL EXPERIMENTAL DESIGN FOR SEISMIC MONITORING
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Nature Chemistry
Plasmonic heating by nanoparticles has been used to promote a range of chemical reactions. Now, thermoplasmonic activation has been applied to latent ruthenium catalysts, enabling olefin metathesis initiated by visible and infrared light. Additionally, the desire to harness light to drive chemical transformations has surely existed as long as the study of chemistry itself. In the earliest documented applications, light was used simply as a heat source — for example, in the distillation of liquids. Since that time, our knowledge of how light and matter interact has increased exponentially, with greater mechanistic and molecular understanding enabling modern photochemists to design molecules with a myriad of finely tuned optical properties for catalysis, biochemistry, optoelectronics and more. Nonetheless, the design and optimization of molecules to achieve specific optical properties is still challenging, and for some applications, a return to the ‘simplest’ transformation — that of light to heat — can offer a more efficient approach to achieve light-mediated chemical reactions. Now, writing in Nature Chemistry, Yossi Weizmann and colleagues describe a strategy for organic and polymer synthesis driven by the conversion of light to heat.
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Confidence assessment is critical for effective automatic target recognition (ATR). Productive use and interpretation of ATR results by analysts or downstream algorithms requires not only algorithmic declarations of target presence and identity, but also algorithmic assessment of the certainty of those declarations in comparison to the certainties of alternative target-identity possibilities. Unfortunately, despite its importance, confidence assessment is an understudied, underdeveloped, and often-neglected function of ATR systems. This lack of regard stems not only from the difficulty of accurate algorithmic determination of target-identity certainty, but also from a general lack of understanding and careful consideration about what confidence should actually represent. We present a framework for confidence assessment that establishes a clear definition of confidence and provides a straightforward theoretical basis for its calculation. This framework is grounded in a hypothesis-theoretic consideration of ATR and it springs from from a handful of axiomatic principles concerning the nature and meaning of confidence in this context. This framework establishes a rigorous mathematical definition of confidence and it provides equations relating confidence to other information that is almost always provided by ATRs. We present an approach for computing confidence within this framework, using an advance process of ATR characterization followed by a simple computation at the time of ATR execution. We discuss practical difficulties with our approach, and we suggest methods for effective mitigation of these difficulties in implemented systems.
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Journal of Advances in Modeling Earth Systems
Dynamical cores used to study the circulation of the atmosphere employ various numerical methods ranging from finite-volume, spectral element, global spectral, and hybrid methods. In this work, we explore the use of Flux-Differencing Discontinuous Galerkin (FDDG) methods to simulate a fully compressible dry atmosphere at various resolutions. We show that the method offers a judicious compromise between high-order accuracy and stability for large-eddy simulations and simulations of the atmospheric general circulation. In particular, filters, divergence damping, diffusion, hyperdiffusion, or sponge-layers are not required to ensure stability; only the numerical dissipation naturally afforded by FDDG is necessary. We apply the method to the simulation of dry convection in an atmospheric boundary layer and in a global atmospheric dynamical core in the standard benchmark of Held and Suarez (1994, https://doi.org/10.1175/1520-0477(1994)075〈1825:apftio〉2.0.co;2).
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Sandia’s Grid Modernization and Energy Storage program works to advance a national vision of a secure, resilient, and sustainable electric system for all users. Our achievements reflect a strategic approach combining technology development; modeling, simulation, and data analytics; and partnered demonstrations and outreach to further the adoption of advanced grid and storage technologies. Our FY22 efforts leverage the strengths of our partnerships—spanning Sandia’s core science and technology competencies as well as external technology leaders—to develop the solutions today which enable the grid of tomorrow. Much of the material in this report comes from the separate 2022 Accomplishments Report compiled by our Energy Storage subprogram team, a cornerstone of our grid research and achievements. The Grid Energy Storage Program at Sandia is focused on making energy storage cost-effective through research and development (R&D) in new battery technologies, advanced power electronics and power conversion systems, improved safety and reliability for energy storage systems, analytical tools for the valuation of energy storage, and the validation of new energy storage technologies through demonstration projects. During the 2022 fiscal year, Sandia executed R&D work supported by the U.S. Department of Energy’s (DOE) Office of Electricity – Energy Storage Program under the leadership of Dr. Imre Gyuk. This report indicates key areas of research and engagement and summarizes the impact of Sandia’s contributions through notable accomplishments, journal publications, patents, and technical conferences and presentations. It is provided with the hope that readers discover ways we can further team to create our modern grid and apply the outcomes of our efforts. The bulk of work described herein is funded by the DOE Office of Electricity and key programs within the DOE Office of Energy Efficiency and Renewable Energy. As we indicated in our report from last year, the contributors to our successes are too numerous to name here, though our team wishes to express our deep gratitude to the numerous program and project sponsors at the US Department of Energy, who often function equally as technical collaborators; our many partners in industry, academia, utilities, and other national labs; and fellow researchers and business partners at Sandia whose leadership and creativity have enabled the accomplishments described herein.
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Journal of Computational Physics
For computational physics simulations, code verification plays a major role in establishing the credibility of the results by assessing the correctness of the implementation of the underlying numerical methods. In computational electromagnetics, surface integral equations, such as the method-of-moments implementation of the magnetic-field integral equation, are frequently used to solve Maxwell's equations on the surfaces of electromagnetic scatterers. These electromagnetic surface integral equations yield many code-verification challenges due to the various sources of numerical error and their possible interactions. In this paper, we provide approaches to separately measure the numerical errors arising from these different error sources. We demonstrate the effectiveness of these approaches for cases with and without coding errors.
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Strain
The calibration of solid constitutive models with full-field experimental data is a long-standing challenge, especially in materials that undergo large deformations. In this paper, we propose a physics-informed deep-learning framework for the discovery of hyperelastic constitutive model parameterizations given full-field surface displacement data and global force-displacement data. Contrary to the majority of recent literature in this field, we work with the weak form of the governing equations rather than the strong form to impose physical constraints upon the neural network predictions. The approach presented in this paper is computationally efficient, suitable for irregular geometric domains, and readily ingests displacement data without the need for interpolation onto a computational grid. A selection of canonical hyperelastic material models suitable for different material classes is considered including the Neo–Hookean, Gent, and Blatz–Ko constitutive models as exemplars for general non-linear elastic behaviour, elastomer behaviour with finite strain lock-up, and compressible foam behaviour, respectively. We demonstrate that physics informed machine learning is an enabling technology and may shift the paradigm of how full-field experimental data are utilized to calibrate constitutive models under finite deformations.
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Nature Microbiology
Lignocellulose forms plant cell walls, and its three constituent polymers, cellulose, hemicellulose and lignin, represent the largest renewable organic carbon pool in the terrestrial biosphere. Insights into biological lignocellulose deconstruction inform understandings of global carbon sequestration dynamics and provide inspiration for biotechnologies seeking to address the current climate crisis by producing renewable chemicals from plant biomass. Organisms in diverse environments disassemble lignocellulose, and carbohydrate degradation processes are well defined, but biological lignin deconstruction is described only in aerobic systems. It is currently unclear whether anaerobic lignin deconstruction is impossible because of biochemical constraints or, alternatively, has not yet been measured. We applied whole cell-wall nuclear magnetic resonance, gel-permeation chromatography and transcriptome sequencing to interrogate the apparent paradox that anaerobic fungi (Neocallimastigomycetes), well-documented lignocellulose degradation specialists, are unable to modify lignin. We find that Neocallimastigomycetes anaerobically break chemical bonds in grass and hardwood lignins, and we further associate upregulated gene products with the observed lignocellulose deconstruction. These findings alter perceptions of lignin deconstruction by anaerobes and provide opportunities to advance decarbonization biotechnologies that depend on depolymerizing lignocellulose.
International Journal of Heat and Mass Transfer
An analytical expression is derived for the thermal response observed during spontaneous imbibition of water into a dry core of zeolitic tuff. Sample tortuosity, thermal conductivity, and thermal source strength are estimated from fitting an analytical solution to temperature observations during a single laboratory test. The closed-form analytical solution is derived using Green's functions for heat conduction in the limit of “slow” water movement; that is, when advection of thermal energy with the wetting front is negligible. The solution has four free fitting parameters and is efficient for parameter estimation. Laboratory imbibition data used to constrain the model include a time series of the mass of water imbibed, visual location of the wetting front through time, and temperature time series at six locations. The thermal front reached the end of the core hours before the visible wetting front. Thus, the predominant form of heating during imbibition in this zeolitic tuff is due to vapor adsorption in dry zeolitic rock ahead of the wetting front. The separation of the wetting front and thermal front in this zeolitic tuff is significant, compared to wetting front behavior of most materials reported in the literature. This work is the first interpretation of a thermal imbibition response to estimate transport (tortuosity) and thermal properties (including thermal conductivity) from a single laboratory test.
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The computational modeling of nearly incompressible materials is a difficult task for many numerical methods, and even after several decades of investigation, it is still an active research area. This report seeks to address the treatment of incompressible materials in meshfree methods using a synergistic combination of two treatments. The first treatment is an $\bar{F}$ method, where the decomposed dilatational and deviatoric parts are calculated over different smoothing domains. The second treatment “activates” additional nodes throughout the domain to increase the flexibility of the model. We implement this synergistic combination in the context of the reproducing kernel particle method (RKPM) and present results for the Cook’s membrane benchmark problem. The results are compared with those using the composite tet10 finite element with a volume-averaged J formulation. We show that the combined treatment is an effective way to deal with nearly incompressible materials in a meshfree framework and compares well with other highly-effective treatments.
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The Source Physics Experiment series is a long-term research and development (R&D) effort under the U.S. Department of Energy’s National Nuclear Security Administration focused on improving the physical understanding of how chemical explosions generate seismoacoustic signals. Beginning in 2011, a series of subsurface chemical explosions in two different and highly contrasting geologies were conducted at the Nevada National Security Site in Nevada, USA with the objective of improving simulation and modeling approaches to explosion identification, yield estimation and other monitoring applications. The two executed phases of the series provide new explosion signature source data from a wide range of geophysical diagnostic equipment; recorded data from the test series is now openly available to the broader seismoacoustic community. This manuscript details the executed test series, deployed seismoacoustic networks, and summarizes major scientific achievements utilizing recorded signatures from the explosive tests.
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Journal of Solution Chemistry
Neodymium (Nd), a rare earth element (REE), is critical to numerous industries. Neodymium can be extracted from ore concentrates, waste materials, or recycled materials such as recycled Nd-Fe-B permanent magnets. In a standard process, concentrated sulfuric acid (H2SO4) is used as an extraction/leaching agent. Therefore, knowledge of Nd(III)–sulfate interaction at high ionic strengths is important for optimization of the extraction process. In addition, sulfate is also a major species in natural surface waters and present in nuclear waste streams. Nd(III) has been used a chemical analog to trivalent actinides in nuclear waste research and development. Consequently, knowledge of Nd(III)-sulfate interactions is also impactful to the field of nuclear waste management. In this study, we have developed a thermodynamic model that can describe the interaction of Nd(III) with sulfate to ionic strengths up to ~ 16.5 mol·kg–1 and to temperatures up to 100 °C. The model adopts the Pitzer formulation to describe activity coefficients of aqueous species. This model can be used to design and optimize a chemical process for REE recovery from ore concentrates, recycled materials, and acid mine drainage (AMD) and to understand the mobility of REEs and actinides in the environment.
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Nature Electronics
We report ion trapping in crystalline domains of electrochemical transistors can be used to create a device capable of both volatile and non-volatile operation.
Microbiology Resource Announcements
Bassalto is a newly isolated phage of Mycobacterium smegmatis mc2155 from the campus grounds of Norfolk State University in Norfolk, VA. Bassalto belongs to the cluster B and subcluster B3 mycobacteriophages, based on the nucleotide composition and comparison to known mycobacteriophages.
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This report describes the structure and content of an open dataset created for the purpose of testing and validating PV module temperature prediction models and their parameters. The dataset contains the main environmental parameters that affect temperature: irradiance, ambient temperature, wind speed and down-welling infrared radiation, as well as measured back-of-module temperature.
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Journal of the Electrochemical Society
Pitting corrosion was evaluated on stainless steels 304H, 304, and 316L the surfaces of which had ASTM seawater printed on them as a function of surface roughness after exposure to an exemplar realistic atmospheric diurnal cycle for up to one year. Methods to evaluate pitting damage included optical imaging, scanning electron microscopy imaging, profilometry analysis, and polarization scans. The developed cyclic exposure environment did not significantly influence pitting morphology nor depth in comparison to prior static exposure environments. Cross-hatching was observed in a majority of pits for all material compositions with the roughest surface finish (#4 finish) and in all surface finishes for the 304H composition. Evidence is provided that cross-hatched pit morphologies are caused by slip bands produced during the grinding process for the #4 finish or by material processing. Additionally, micro-cracking was observed in pits formed on samples with the #4 surface finish and was greatly reduced or absent for pits formed on samples with smooth surface finishes. This suggests that both a low RH leading to an MgCl2-dominated environment and a rough surface containing significant residual stress are necessary for micro-cracking. Finally, the use of various characterization techniques and cross sectioning was employed to both qualitatively and quantitatively assess pitting damage across all SS compositions and surface finishes.
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Software reverse engineering (RE) requires analysts to closely read and make decisions about code. Little is known about what makes an analyst successful, making it difficult to train new analysts or design tools to augment existing ones. The goal of this project was to quantify the eye movement behaviors supporting RE and code comprehension more generally. We applied eye-tracking methods from the language comprehension literature to understand where analysts direct their attention over time when completing tasks (e.g., function identification, bug detection). Across three studies, we manipulated aspects of code hypothesized to impact comprehension (e.g., variable name meaningfulness, code complexity) and presentation methods (e.g., line-by-line, free viewing, gaze-contingent moving window) to understand effects on accuracy and gaze patterns. Results showed clear benefits of meaningful variable names, and effects of expertise on global and line-specific viewing patterns. Findings could inspire empirically-supported tool or analytic adaptations that help to reduce analyst workload.
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Applied Optics
Fogs, low lying clouds, and other highly scattering environments pose a challenge for many commercial and national security sensing systems. Current autonomous systems rely on optical sensors for navigation whose performance is degraded by highly scattering environments. In our previous simulation work, we have shown that polarized light can penetrate through a scattering environment such as fog. We have demonstrated that circularly polarized light maintains its initial polarization state better than linearly polarized light, even through large numbers of scattering events and thus ranges. This has recently been experimentally verified by other researchers. In this work, we present the design, construction, and testing of active polarization imagers at short-wave infrared and visible wavelengths. We explore multiple polarimetric configurations for the imagers, focusing on linear and circular polarization states. The polarized imagers were tested at the Sandia National Laboratories Fog Chamber under realistic fog conditions. We show that active circular polarization imagers can increase range and contrast in fog better than linear polarization imagers. We show that when imaging typical road sign and safety retro-reflective films, circularly polarized imaging has enhanced contrast throughout most fog densities/ranges compared to linearly polarized imaging and can penetrate over 15 to 25 m into the fog beyond the range limit of linearly polarized imaging, with a strong dependence on the interaction of the polarization state with the target materials.
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Energies
In this study, oils from various sources were subjected to pyrolysis conditions; that is, without oxidizer, as the samples were heated to 500 °C, and held at that temperature. The oils studied included: (1) heavy oil from Grassy Creek, Missouri; (2) oil from tar sands of Asphalt Ridge in Utah; (3) mid-continent oil shales of three formations (two of Chattanooga formation, Pennsylvanian (age) formation, and Woodford formation); and (4) a Colorado Piceance Basin shale. Differential scanning calorimetry (DSC) and thermogravimetric analysis (TGA) with either gas chromatography (GC) or mass spectrometry (MS) were used to quantify the produced gases evolved in the tests. Purge gases of helium, argon, and humid carbon dioxide were utilized. Larger scale pyrolysis tests were conducted in a tube furnace coupled to a MS and a GC. The results consistently showed that pyrolysis occurred between 300 °C and 500 °C, with the majority of gases being mainly hydrogen and light alkanes. This behavior was essentially consistent, regardless of the oil source.
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Journal of Computational Physics
For computational physics simulations, code verification plays a major role in establishing the credibility of the results by assessing the correctness of the implementation of the underlying numerical methods. In computational electromagnetics, surface integral equations, such as the method-of-moments implementation of the magnetic-field integral equation, are frequently used to solve Maxwell's equations on the surfaces of electromagnetic scatterers. These electromagnetic surface integral equations yield many code-verification challenges due to the various sources of numerical error and their possible interactions. In this paper, we provide approaches to separately measure the numerical errors arising from these different error sources. We demonstrate the effectiveness of these approaches for cases with and without coding errors.
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