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BinSimDB: Benchmark Dataset Construction for Fine-Grained Binary Code Similarity Analysis

Lecture Notes of the Institute for Computer Sciences, Social-Informatics and Telecommunications Engineering, LNICST

Zuo, Fei; Tompkins, Cody; Zeng, Qiang; Luo, Lannan; Choe, Yung R.; Rhee, Junghwan

Binary Code Similarity Analysis (BCSA) has a wide spectrum of applications, including plagiarism detection, vulnerability discovery, and malware analysis, thus drawing significant attention from the security community. However, conventional techniques often face challenges in balancing both accuracy and scalability simultaneously. To overcome these existing problems, a surge of deep learning-based work has been recently proposed. Unfortunately, many researchers still find it extremely difficult to conduct relevant studies or extend existing approaches. First, prior work typically relies on proprietary benchmark without making the entire dataset publicly accessible. Consequently, a large-scale, well-labeled dataset for binary code similarity analysis remains precious and scarce. Moreover, previous work has primarily focused on comparing at the function level, rather than exploring other finer granularities. Therefore, we argue that the lack of a fine-grained dataset for BCSA leaves a critical gap in current research. To address these challenges, we construct a benchmark dataset for fine-grained binary code similarity analysis called BinSimDB, which contains equivalent pairs of smaller binary code snippets, such as basic blocks. Specifically, we propose BMerge and BPair algorithms to bridge the discrepancies between two binary code snippets caused by different optimization levels or platforms. Furthermore, we empirically study the properties of our dataset and evaluate its effectiveness for the BCSA research. The experimental results demonstrate that BinSimDB significantly improves the performance of binary code similarity comparison.

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A note on the reliability of goal-oriented error estimates for Galerkin finite element methods with nonlinear functionals

Applied Mathematics Letters

Granzow, Brian N.; Bond, Stephen D.; Seidl, D.T.; Endtmayer, Bernhard

We consider estimating the discretization error in a nonlinear functional J(u) in the setting of an abstract variational problem: find u∈V such that B(u,φ)=L(φ)∀φ∈V, as approximated by a Galerkin finite element method. Here, V is a Hilbert space, B(⋅,⋅) is a bilinear form, and L(⋅) is a linear functional. We consider well-known error estimates η of the form J(u)−J(uh)≈η=L(z)−B(uh,z), where uh denotes a finite element approximation to u, and z denotes the solution to an auxiliary adjoint variational problem. We show that there exist nonlinear functionals for which error estimates of this form are not reliable, even in the presence of an exact adjoint solution z. An estimate η is said to be reliable if there exists a constant C∈R>0 independent of uh such that |J(u)−J(uh)|≤C|η|. We present several example pairs of bilinear forms and nonlinear functionals where reliability of η is not achieved.

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Frontal polymerization of thermosets to enable vacuum-formed structural electronics

Nature Communications

Fowler, Hayden E.; Taylor, Mychal S.; Nguyen, Chi P.H.; Boese, David A.; Baca, Esteban; Greenlee, Andrew J.; Kaufman, Georgia E.; Gallegos, Michael A.; Huntley, Emily F.; Appelhans, Leah N.; Kaehr, Bryan; Leguizamon, Samuel C.

Material design and accessible manufacturing are often at odds with each other, calling for creative solutions to adapt high-performance materials to available processes. This challenge is represented well by in-mold electronics, an innovative approach to the manufacture of 3D circuitry and electronic components that offers game-changing advantages. In-mold electronics relies on vacuum forming processes, which are historically limited to thermoplastics. Extending these methods to include thermosets would enable manufacturing of robust components with desirable properties. Here, we provide a solution to make thermoset materials amenable to vacuum forming. Specifically, an ambient polymerization is used to transition a liquid monomeric solution to an elastomeric gel. These free-standing gels can then be vacuum formed, and the reaction can be completed via frontal polymerization. Thermoset materials produced with this method have properties that provide benefits over traditionally employed thermoplastic substrates and enable 3D device integration into environmentally demanding architectural, automotive, and extraterrestrial structures.

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Machine learning-led semi-automated medium optimization reveals salt as key for flaviolin production in Pseudomonas putida

Communications Biology

Forrer, Mark

Although synthetic biology can produce valuable chemicals in a renewable manner, its progress is still hindered by a lack of predictive capabilities. Media optimization is a critical, and often overlooked, process which is essential to obtain the titers, rates and yields needed for commercial viability. Here, we present a molecule- and host-agnostic active learning process for media optimization that is enabled by a fast and highly repeatable semi-automated pipeline. Its application yielded 60% and 70% increases in titer, and 350% increase in process yield in three different campaigns for flaviolin production in Pseudomonas putida KT2440. Explainable Artificial Intelligence techniques pinpointed that, surprisingly, common salt (NaCl) is the most important component influencing production. The optimal salt concentration is very high, comparable to seawater and close to the limits that P. putida can tolerate. The availability of fast Design-Build-Test-Learn (DBTL) cycles allowed us to show that performance improvements for active learning are rarely monotonous. This work illustrates how machine learning and automation can change the paradigm of current synthetic biology research to make it more effective and informative, and suggests a cost-effective and underexploited strategy to facilitate the high titers, rates and yields essential for commercial viability.

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Superstructure magnetic anisotropy in Fe3O4 nanoparticle chains

Nature Communications

Lu, Ping

Magnetic anisotropy is essential for many applications of ferromagnetic/ferrimagnetic materials, including permanent magnets and magnetic recording media. Attempts have been made recently to build up 3-D nanoparticle and quantum dot assemblies, however, it is not understood yet if a nanoparticle assembly can possess high magnetic anisotropy with low anisotropic materials. In this article, we report our discovery of high magnetic anisotropy resulted from Fe3O4 nanoparticle chains. We started with closely-packed nanoparticle assemblies of spherical Fe3O4 nanoparticles that exhibit low magnetocrystalline anisotropy and shape anisotropy, and corresponding negligible coercivity. When the nanoparticle assemblies are compressed under pressure, they form bundles or arrays that consist of Fe3O4 chains with a length scale of several hundred nanometers. Magnetic measurements show that these Fe3O4 chain arrays possess a high uniaxial magnetic anisotropy (Keff ~ 2.9×105J/m³) and significant magnetic coercivity. Our simulations reveal that interparticle magnetic dipolar interactions contribute to this type of superstructure magnetic anisotropy. This study demonstrates the feasibility and approaches to create “patterned” high magnetic anisotropy in nanoparticle superstructures/assemblies.

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Towards an intuitive application of WEC control co-design

Ocean Engineering

Forbush, Dominic D.; Coe, Ryan G.; Bacelli, Giorgio; Gaebele, Daniel T.; Keow, Alicia

A simple co-design example in a reduced parameter space is presented for an oscillating flap device. Initially, the WEC geometry and mass properties are considered along with drivetrain gear ratio, inertia, motor constant and stiffness under both PI and optimal control. This parameter space is reduced to those to which performance is most sensitive for a fixed geometry. The gear ratio, drivetrain stiffness, and flap mass are found to be the most impactful design criteria as they can create orders of magnitude variations in power performance. The performance of the optimized system is compared with several sub-optimal variants in terms of electrical and mechanical power capture, transmission coefficients, and transducer power gain. Notably, though substantial power capture improvements are demonstrated when an optimal controller is employed, this power capture remains sensitive to appropriate selections of drivetrain and flap design parameters, implying that control co-design procedures remain necessary for high-performing WECs. A number of practical caveats and extensions to the presented co-design methodology are suggested, including the characterization of system static friction, especially in the presence of high gear ratios.

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Applying the FAIR Principles to computational workflows

Scientific Data

Pouchard, Line

Recent trends within computational and data sciences show an increasing recognition and adoption of computational workflows as tools for productivity and reproducibility that also democratize access to platforms and processing know-how. As digital objects to be shared, discovered, and reused, computational workflows benefit from the FAIR principles, which stand for Findable, Accessible, Interoperable, and Reusable. The Workflows Community Initiative’s FAIR Workflows Working Group (WCI-FW), a global and open community of researchers and developers working with computational workflows across disciplines and domains, has systematically addressed the application of both FAIR data and software principles to computational workflows. We present recommendations with commentary that reflects our discussions and justifies our choices and adaptations. These are offered to workflow users and authors, workflow management system developers, and providers of workflow services as guidelines for adoption and fodder for discussion. The FAIR recommendations for workflows that we propose in this paper will maximize their value as research assets and facilitate their adoption by the wider community.

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Image masks of global ship tracks for NASA MODIS data products

Scientific Data

Warburton, Pierce; Shuler, Kurtis; Patel, Lekha

Ship tracks, long thin artificial cloud features formed from the pollutants in ship exhaust, are satellite-observable examples of aerosol-cloud interactions (ACI) that can lead to increased cloud albedo and thus increased solar reflectivity, phenomena of interest in solar radiation management. In addition to ship tracks being of interest to meteorologists and policy makers, their observed cloud perturbations provide benchmark evidence of ACI that remain poorly captured by climate models. To broadly analyze the effects of ship tracks, high-resolution satellite imagery data highlighting their presence are required. To support this, we provide a hand labelled dataset to serve as a benchmark for a variety of subsequent analyses. Established from a previous dataset that identified ship track presence using NASA’s MODIS Aqua satellite imager, our first-of-its-kind dataset is comprised of image masks: capturing full ship track regions, including their contours, emission points and dispersive patterns. In total, 300 images, or around 2,500 masked ship tracks, observed under varying conditions are provided, and may facilitate training of machine learning algorithms to automate extraction.

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Dislocation nano-hydrides in nickel: Nucleation, evolution and effects on dislocation behaviors

Journal of the Mechanics and Physics of Solids

Leon-Cazares, Fernando D.; Zhou, Xiaowang; Alleman, Coleman; San Marchi, Chris

Nano-hydrides have been predicted to precipitate at the core of edge dislocations in the Ni-H system, a mechanism that may promote hydrogen embrittlement. However, nano-hydride nucleation, growth, and effects on dislocation behavior have seldom been explored. This work combines molecular dynamics grand canonical Monte Carlo (MD-GCMC) simulations and continuum modeling to uncover a wide range of phenomena linked to dislocation nano-hydrides. Simulations reveal that nano-hydrides can be stabilized at dislocation cores with all character angles, including screw segments, due to the hydrostatic stresses around the cores of the Shockley partials. Nano-hydride nucleation takes place in these regions, and growth is dictated by the character angle θ of the perfect dislocation. The equilibrium stacking fault width deq varies dynamically to increase the local hydrostatic stress field and facilitate the formation of the nano-hydride, forming a constriction-like feature and leading to three distinct behaviors: deq decreases for θ>30°, deq remains unchanged for θ=30°, and deq increases for θ<30°. Remote hydrostatic and Escaig stresses are also shown to influence the nucleation stage, implying stress concentrations such as those ahead of crack tips may facilitate nano-hydride precipitation. Moreover, we identify a new hydrogen-induced 60° dislocation reaction that emits a Shockley partial on a conjugate plane, with potential implications for twin nucleation. Testable predictions from this study are then used to reinterpret previous results from the literature. These findings provide a comprehensive framework to assess nano-hydride formation and evolution at dislocations in nickel and other face-centered cubic metals, with important implications to hydrogen embrittlement.

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Lassa virus protein–protein interactions as mediators of Lassa fever pathogenesis

Virology Journal

Jan, Sharon; Phadke, Kruttika S.; Lam, Victor L.; Branda, Steven S.; Johnson, Dylan M.

Viral hemorrhagic Lassa fever (LF), caused by Lassa virus (LASV), is a significant public health concern endemic in West Africa with high morbidity and mortality rates, limited treatment options, and potential for international spread. Despite advances in interrogating its epidemiology and clinical manifestations, the molecular mechanisms driving pathogenesis of LASV and other arenaviruses remain incompletely understood. This review synthesizes current knowledge regarding the role of LASV host-virus interactions in mediating the pathogenesis of LF, with emphasis on interactions between viral and host proteins. Through investigation of these critical protein–protein interactions, we identify potential therapeutic targets and discuss their implications for development of medical countermeasures including antiviral drugs. This review provides an update in recent literature of significant LASV host-virus interactions important in informing the development of targeted therapies and improving clinical outcomes for LF patients. Knowledge gaps are highlighted as opportunities for future research efforts that would advance the field of LASV and arenavirus pathogenesis.

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Recrystallization, cracking, and erosion of dispersoid-strengthened tungsten materials during exposure to divertor plasmas

Nuclear Materials and Energy

Kolasinski, Robert; Coburn, Jonathan D.; Truong, Dinh; Watkins, Jonathan G.; Abrams, Tyler; Zak Fang, Z.; Hood, Ryan T.; Nygren, Richard E.; Leonard, Anthony; Ren, Jun; Rudakov, Dmitry; Sugar, Joshua D.; Tsui, Cedric K.W.; Wang, Huiqian; Whaley, Josh A.; Bykov, Igor; Cruz, Antonio J.; Glass, Fenton; Herfindal, Jeffrey; Lasnier, Charlie; Marini, Claudio; Mclean, Adam; Moser, Auna; Nishimoto, Ryan K.; Wilcox, Robert; York, Warren L.

Nuclear Materials and Energy

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Comparison of interlaminar damage modeling strategies for hybrid composite/aluminum laminates subjected to low-velocity impact

Composite Structures

Berkowitz, Katherine; Sommer, Drew E.; Werner, Brian T.; Long, Kevin N.; Skulborstad, Alyssa J.

Low-velocity impact of hybrid metal-composite structures was investigated experimentally and computationally. Composite laminates consisting of 2D woven glass fiber reinforced polymer (GFRP) and carbon fiber reinforced polymer (CFRP) were joined with a 6061-T6 aluminum plate using an epoxy adhesive. Two variations of the structure were studied; one consisting of all plies oriented at 0° and one consisting of all plies oriented at 45°. A drop tower was used to impact structures at a range of energies, including energies above and below the threshold at which the aluminum layer was perforated. Numerical simulations were implemented using Sierra/SM, an in-house transient dynamics finite element code developed at Sandia National Laboratories. A Hosford plasticity model was used to describe the response of the aluminum layer. A newly implemented orthotropic continuum damage mechanics (CDM) constitutive model was used to represent the composite laminate. This 3D-CDM model was compared to a cohesive zone model (2D-CDM/CZM) to investigate efficacy of aluminum perforation energy prediction, delamination prediction, and computational cost. Accuracy of each model was evaluated using the experimental results. Each showed good agreement with the tests for both the force and velocity histories, as well as the observed damage mechanisms. The 2D-CDM/CZM model was marginally more accurate in capturing both the composite and aluminum behavior — this model averaged error percentages of −11.2% and 10.8% for residual velocity and peak force, respectively. Meanwhile, the 3D-CDM model predictions yielded average error percentages of −35.5% (velocity) and 22.6% (force). However, the 3D-CDM model generally resulted in a decreased computational cost; the average run time was 14% shorter than the 2D-CDM/CZM model and 3x as many timesteps per hour were computed using the same computational resources. New experimental data on the impact and perforation resistance of metal-composite laminates is presented in addition to numerical predictions of the impact behavior.

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Roadmap to an electron beam or X-ray center for industrial applications

Radiation Physics and Chemistry

Lieberman, Jodi

This paper introduces the topics that need consideration to allow an effective feasibility analysis of electron beams and/or X-rays technologies prior to potential investment and implementation of these technologies for industrial applications. It also highlights considerations for planning, developing and construction of an electron beam or X-ray facility The focus of this paper is on business topics and it provides details of where additional technical information can be found. The paper also describes current applications for electron beam and X-ray technologies to demonstrate their potential.

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Applying Machine Learning and Bayesian Inference to Identify and Locate Moving Anthropogenic Sources Using Distributed Acoustic Sensing Data

Seismological Research Letters

Luckie, Thomas W.; Porritt, Robert W.; Baker, Michael G.

Distributed acoustic sensing (DAS) systems, which use existing telecommunication fibers, offer high-resolution capabilities ideal for recording anthropogenic sources. However, the complexity of urban environments and the large amount of data recorded by DAS require automated methods to efficiently detect and categorize anthropogenic sources. We evaluate how well three machine learning models (k-nearest neighbor [k-NN], convolutional neural networks, and recurrent-convolutional neural networks) can identify various anthropogenic sources recorded by DAS. Our findings reveal that both k-NN and neural network methods perform well in high signal-to-noise ratio (SNR) settings. However, their accuracy decreases at SNRs < 4. We also use Kalman filtering, a form of Bayesian inference, on backprojected locations of these sources to recover locations that generally fall within standard smartphone Global Positioning System errors. By combining machine learning and Kalman filter results, we calculate a multidimensional model of moving anthropogenic sources. These results demonstrate the potential of DAS data in urban seismology for accurately identifying and locating such sources. Depending on the research objectives, these sources can be further studied or filtered out to improve the quality of seismic data for earthquake studies. Such methods provide a valuable tool for urban seismology and seismic hazard analysis.

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Unlocking enhanced gas capture via core scrambling of porous-organic cages

Journal of Molecular Liquids

Rimsza, Jessica M.; Bays, Nathan R.; Addison, Brianna M.; Root, Harrison D.; Hurlock, Matthew J.

The demand for low-cost, low-energy, and highly selective gas capture and separations is an ongoing driver of porous material development. Porous liquids have been identified as a promising gas separation material by creating permanent porosity in inorganic solvents through inclusion of nanoporous materials that sterically exclude solvent from their internal porosity. Among the nanoporous materials that can be used to form porous liquids, porous-organic cages (POCs) have been one of the most popular due to the inherent tunability of POCs. “Scrambled” POCs with varying functionalities on the POC vertices have been developed and incorporated into porous liquid compositions, increasing their gas adsorption capacity. An unexplored avenue to tailor the properties of porous liquids is through scrambling the functionality of the core of the POC. Therefore, we have synthesized a new POC, a CC3-OH derivative with scrambled hydroxides on the core and evaluated the impact on the CO2 uptake capacity in silicon oil-based porous liquids. Core scrambling of the POC resulted in a twofold increase CO2 adsorption capacity in the porous liquid, an emergent property that is a dramatic increase beyond a linear combination of the gas adsorption capacity of the neat solvent and the POC. Density functional theory modeling of the CC3 POC and its hydroxide-based derivatives identified that free rotation of the linker hydroxide allowed for forced interaction between the CO2 molecule and the hydroxide in the pore window. Solvation of the POC may release scrambled core hydroxides from intramolecular bonding with a neighboring imine, allowing for increased gas uptake in the porous liquid over the neat POC. These results identify a key structural relationship of POCs that enables emergent properties in porous liquids and can guide future development of liquid phase gas capture and separation materials for environmental and industrial applications.

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Personalized and uncertainty-aware coronary hemodynamics simulations: From Bayesian estimation to improved multi-fidelity uncertainty quantification

Computer Methods and Programs in Biomedicine

Menon, Karthik; Zanoni, Andrea; Khan, M.O.; Geraci, Gianluca; Nieman, Koen; Schiavazzi, Daniele E.; Marsden, Alison L.

Background: Non-invasive simulations of coronary hemodynamics have improved clinical risk stratification and treatment outcomes for coronary artery disease, compared to relying on anatomical imaging alone. However, simulations typically use empirical approaches to distribute total coronary flow amongst the arteries in the coronary tree, which ignores patient variability, the presence of disease, and other clinical factors. Further, uncertainty in the clinical data often remains unaccounted for in the modeling pipeline. Objective: We present an end-to-end uncertainty-aware pipeline to (1) personalize coronary flow simulations by incorporating vessel-specific coronary flows as well as cardiac function; and (2) predict clinical and biomechanical quantities of interest with improved precision, while accounting for uncertainty in the clinical data. Methods: We assimilate patient-specific measurements of myocardial blood flow from clinical CT myocardial perfusion imaging to estimate branch-specific coronary artery flows. Simulated noise in the clinical data is used to estimate the joint posterior distributions of the model parameters using adaptive Markov Chain Monte Carlo sampling. Additionally, the posterior predictive distribution for the relevant quantities of interest is determined using a new approach combining multi-fidelity Monte Carlo estimation with non-linear, data-driven dimensionality reduction. This leads to improved correlations between high- and low-fidelity model outputs. Results: Our framework accurately recapitulates clinically measured cardiac function as well as branch-specific coronary flows under measurement noise uncertainty. We observe substantial reductions in confidence intervals for estimated quantities of interest compared to single-fidelity Monte Carlo estimation and state-of-the-art multi-fidelity Monte Carlo methods. This holds especially true for quantities of interest that showed limited correlation between the low- and high-fidelity model predictions. In addition, the proposed multi-fidelity Monte Carlo estimators are significantly cheaper to compute than traditional estimators, under a specified confidence level or variance. Conclusions: The proposed pipeline for personalized and uncertainty-aware predictions of coronary hemodynamics is based on routine clinical measurements and recently developed techniques for CT myocardial perfusion imaging. The proposed pipeline offers significant improvements in precision and reduction in computational cost.

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A predictive analytical model of electrical transport in multi-principal-element alloys

Scripta Materialia

Abere, Michael J.; Mcpherson, Shane L.; Jarzembski, Amun; Mcdonald, Anthony; Ton-That, Toai; Huang, Hailong; Argibay, Nicolas

A predictive analytical model is presented for the electrical conductivity of multi-principal-element alloys (MPEAs), including those containing aluminum, transition metals, and refractory metals. Given that the lattice parameter of the Wigner-Seitz cell of an MPEA is similarly variable to a bulk metallic glass, it is postulated that electron scattering can be approximated by a series of two-level systems. The resulting reduced-order model enabled an accurate determination of electrical resistivity and electron thermal conductivity based on the scattering of electrons in a two-level system across a Bloch-potential-based virtual crystal approximation. Model results are compared to experimental four-point probe electrical resistivity measurements between 300 K and 700 K for Al0.3CoCrCuFeNi, CoCrFeMnNi, (CoCrFeMnNi)0.98W0.02, (CoCrFeMnNi)0.95W0.05, and Nb4Ta4V3Ti, for model validation.

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Wave energy in season: a comparative approach to feasibility of seasonal deployments for remote coastal communities

Applied Energy

Trueworthy, Ali; Gaebele, Daniel T.; Jones, Kristin; Hermanson, Ian; Grear, Molly

Remote coastal communities, which could be early adopters of wave energy projects, have concerns over costs, conflicts, and potential risks of development. Designers and developers are challenged to address these community concerns as they continue to develop wave energy technologies. One potential means of reducing costs, conflicts, and risks, especially for demonstration and pilot-scale projects, could be planning a deployment that operates for only a portion of the year—a seasonal deployment. In this paper we examine the impacts of a seasonal deployment in terms of cost, electricity production, operations and maintenance, environmental impacts, and community benefits. We take a holistic, comparative approach to feasibility that can be replicated for other comparative studies. We estimate electricity production using a point absorber WEC modeled near Sitka, AK, USA and optimized for the given sea conditions. We determine that, for remote community sized projects, seasonal deployments could result in small cost savings (less than 10 %), but larger decreases in annual energy production (around 30 % for our case study area). Seasonal deployments could be preferable in places with seasonal energy needs, if failures and device access become a major hindrance to wave energy technology development, or as a cautionary approach to introducing new technology to the oceans. We also determine that a highly seasonal wave resource is not necessarily a requirement for seasonal deployments to be considered. Seasonal deployments are an alternative to year-round deployments that can be considered in places where marine spatial conflict is a seasonal concern.

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3D printed polymer gaskets for custom-form batteries

Journal of Power Sources Advances

Cardenas, Jorge A.; Merrill, Laura C.; Maurel, Alexis; Martinez, Ana C.; Warren, Benjamin; Bullivant, John P.; Harrison, Katharine L.; Cook, Adam W.; Roach, Devin J.; Commisso, Alex J.; Leguizamon, Samuel C.; Linde, Erik

Additive manufacturing (AM) processes, like 3D printing, help to facilitate complex and customizable battery geometries which can provide design freedom and enhance volumetric energy density within electronic devices. AM materials must have the thermal and mechanical properties that enable printability, and when used in batteries, AM materials must also be chemically and electrochemically compatible with the battery chemistry. The compatibility between AM materials and the battery is of particular importance for the cell packaging materials which must be inert and are often overlooked. This study systematically studies AM-compatible polymeric materials for use as gaskets in lithium-ion cells. The materials investigated include three thermoplastics suitable for material extrusion printing: polylactic acid (PLA), polycarbonate, and polypropylene/polyethylene copolymer (PPPEC); and two photoresins suitable for vat photopolymerization (VPP) printing: an acrylate-based photoresin and a polyethylene glycol diacrylate photoresin. The AM gasket materials were tested in comparison to a conventional commercial polypropylene gasket. Mechanical testing (swell measurements and material stiffness) and electrochemical testing (linear sweep voltammetry and galvanostatic cycling of full cells) demonstrated that PLA and the VPP polymers were the least compatible with the lithium-ion battery chemistry, despite their prevalent use in studies of AM batteries, and that PPPEC was the most compatible.

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Compaction and Morphology of Lost Circulation Materials

SPE Journal

Kibikas, William; Ingraham, Mathew

Lost circulation material (LCM) selection is critical to effectively and efficiently treating wellbore fluid losses in geothermal drilling where costs of treatment can be as much as 30% of the total drilling cost. We conducted several uniaxial compaction experiments on 10 different materials and several material mixtures to identify critical mechanical parameters of each. Materials degraded at 200°C were also investigated to understand how elevated temperatures in geothermal wells would degrade their compaction behavior. Granular materials tended to have lower compressibility and higher compression resistance, while more elongated and softer materials had less mechanical stiffness. Mixing materials tended to moderate the mechanical behaviors while heating universally increased the compaction of materials. Microscopy showed that particle strength tended to correlate positively with roundness and circularity and negatively with elongation of a material. Convexity of the degraded and undegraded materials showed heating may have increased the convexity or roughness of the individual particles. We concluded that granular materials are likely to provide the best seals in wells but that a mixture of size distribution, mechanical rigidity, and elongation is more likely to form a better seal for geothermal wells.

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New Methods for Predicting Non-Born-Oppenheimer Chemistry

Mccaslin, Laura M.; Arias Martinez, Juan E.

Current methods for modeling non-adiabatic molecular dynamics face fundamental limitations when treating geometric phase effects, quantum mechanical phenomena where nuclear wavepackets acquire phase shifts when encircling conical intersections. Existing approaches either neglect these effects entirely or rely on potential energy surfaces arising from the Born-Oppenheimer approximation, which introduce artificial singularities and can overestimate geometric phase contributions. This project deve

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Characterization, Accelerated Life Testing, and Finite Element Modeling of Low Temperature Solder Wire Interconnect Degradation Mechanisms

Progress in Photovoltaics: Research and Applications

Hartley, James Y.; Miller, David C.; Ulicna, Sona; Bosco, Nick; Hacke, Peter

Low-temperature soldered wire interconnection (LTSWI) is a technology utilizing many interconnect wires carried on a polymer foil to form electrical connections against cell gridlines without a separate soldering process. In this work, LTSWI module samples were characterized for material properties and assembly dimensions and subjected to accelerated aging experiments to induce degradation. A finite element analysis model was developed based on characterization results, to analyze internal stressors during environmental exposures. The polymer foil contains polyethylene terephthalate and low-density polyethylene layers, and solder composition was tin bismuth, which notably was not metallurgically bonded to cell gridlines. High temperature accelerated exposures created power loss up to 9% in minimodule samples, with fill factor losses implicating contact degradation. Posttest characterization identified solder-gridline cracking and wire-cell separation as contributing mechanisms. Finite element modeling demonstrated that wire-to-cell contact is maintained by polymer contraction post lamination but is reversible, resulting in contact loss and wire separation during high temperature exposure. Simulations also detected in-plane wire-to-cell displacements, driven by surrounding polymer motion in response to high temperatures and mechanical load. We hypothesize that the propensity for wire movement during environmental exposure damages the not-metallurgically bonded wire-gridline interface and contributes to LTSWI contact degradation. Because distinct from thermal expansion mismatches which damage traditionally soldered modules, current test protocols are likely not applying the intended acceleration factors to LTSWI modules. This work highlights how construction-specific accelerated testing may be needed for nontraditional module designs and provides a starting point for accurate LTSWI life assessment.

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Competing mechanisms at vibrated interfaces of density-contrast fluids

Physical Review Fluids

Chu, Tianyi; Wilfong, Benjamin; Koehler, Timothy; Mcmullen, Ryan M.; Bryngelson, Spencer H.

Fluid-fluid interfacial instability and subsequent fluid mixing are ubiquitous in nature and engineering. The hydrodynamic instability of fluid interfaces has long centered on the pressure gradient-driven long-wavelength Rayleigh-Taylor instability and the resonance-induced short-wavelength Faraday instability. However, neither instability alone can explain the dynamics when both mechanisms are present. We identify a previously unseen multi-modal instability emerging from their coexistence. When the denser fluid is polydimethylsiloxane, the mixed region at a high density contrast (Atwood number = 0.9) spans a vibration amplitude range approximately twice the gravitational acceleration. Using Floquet stability analysis, we show how vibrations govern transitions between the RT and Faraday instabilities, leading to contention between these instabilities rather than resonant enhancement. The initial transient growth is represented by the exponential modal growth of the most unstable Floquet exponent, along with its accompanying periodic behavior. Direct numerical simulations validate these findings and track interface breakup into the multiscale and nonlinear regimes. Specifically, we show that growing RT modes nonlinearly suppresses Faraday responses even when the initial growth rate of the Faraday instability is 3.63 times that of RT, so a bidirectional competition hinders their sustained coexistence.

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Modeling neutral defects in III-V ternary alloys with a special quasirandom structure: Analysis of As- and III-site point defects in InGaAs

Physical Review B

Schultz, Peter A.

While first-principles density functional theory modeling has become a vital tool to investigate defect properties in semiconductors, the lack of crystalline periodicity in pseudobinary random composition alloys, such as In1−xGaxAs, complicates such analyses. We present a simulation strategy to systematically take into account the variability in the local defect environment in order to predict statistical properties of neutral intrinsic defects in In1−xGaxAs. We use a comprehensive sampling from a modest-sized 64-atom special quasirandom structure (SQS) to define a statistically representative set of defects, and use a 512-atom hypercell, a 2×2×2 supercell of SQS supercells, to achieve cell-size convergence. We articulate an equivalent site principle and describe how it constrains atomic chemical reference energies in computation of defect formation energies in pseudobinary alloys. A simple protocol for estimating reference energies for the Ga and In atoms sharing the III site succeeds in obtaining the equivalence of defects at Ga-sites and In sites in the SQS supercell, (<30 meV differences in average formation energies). For III-site defects, such as the As antisite AsIII, the statistical variability in formation energies is modest, ≈0.1–0.2 eV. The variability in formation energy at As-site defects, such as the As vacancy vAs, can be much larger, >1 eV. The As antisite is shown to be a low-energy defect and the most likely to be present in as-grown materials, just as in GaAs. All other defects are higher-energy defects unlikely to be important in native material, but potentially important in radiation-damaged material. With a strong variability in defect energies, especially on the As-site, explicit consideration of statistical variability due to compositional randomness will be imperative for meaningful and quantitative comparisons to experiment.

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In-plane thermal conductivity and the applicability of the Wiedemann-Franz law in dilute AlCu thin films

Applied Physics Letters

Makarem, Sara; Gowda, Shivashree; Mohan, Ramya; Zare, Saman; Sadat, Nazmun S.; Brummel, Ian A.; Ma, Chung T.; Bin Hoque, Md S.; Hirt, Daniel; Islam, Md R.; Poon, Joseph; Ihlefeld, Jon F.; Esteves, Giovanni; Scott, Ethan A.; Hopkins, Patrick E.

The Wiedemann-Franz (WF) law correlates heat and charge transport in metals. However, the validity of this correlation remains an open-ended question, especially in the context of inelastic scattering at room temperature. To address this gap in knowledge, we perform independent measurements of the in-plane thermal and electrical conductivities across four AlCu (0.5% Cu) films [thickness ( h ) ≈ 174, 98, 53, and 24 nm] using optical pump-probe metrologies and four-point probe techniques, respectively. For in-plane thermal conductivity measurements, we utilize time-domain thermoreflectance, in both concentric and beam-offset configurations, and the time-resolved magneto-optic Kerr effect. Our results show that the WF law overpredicts the thermal conductivity by at least ∼10% in all films, thus demonstrating modest deviations in predicted thermal conductivity when applying the WF law to dilute AlCu films. Using infrared variable angle spectroscopic ellipsometry, we demonstrate increased electron scattering rates in the thinnest film ( h ≈ 24 nm), indicating electron-boundary scattering drives the reduction in in-plane thermal conductivity. This is generally an elastic scattering process, which is supported by our thermal conductivity measurements and analysis.

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Improved Bayesian regularization of inverse problems in vibrations and acoustics using noise-only measurements

Applied Acoustics

Coletti, Keaton; Davis, R.B.; Schultz, Ryan

This paper studies Tikhonov regularization (ridge regression) parameter selection for problems in vibrations and acoustics. The selection method is based on a popular Bayesian method, but it incorporates measurements of sensor noise. The regularization parameter is closely related to the ratio of system input energy to noise energy, so noise measurements inform the inference procedure and improve parameter identification. In cases where standard Bayesian regularization identifies zero as the optimal regularization parameter, noise measurements guarantee a unique nonzero optimum. Sufficient theoretical criteria are developed for this guarantee. The method is verified in even-determined and under-determined configurations in an acoustic source localization simulation and a vibration load identification experiment. It is shown to yield significant improvements over existing empirical Bayesian regularization. Improvements are larger in the even-determined case and smaller in the under-determined case, wherein the inverse solution is less sensitive to the regularization parameter.

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SIERRA Multimechanics Module: Aria Verification Manual - Version 5.26

Clausen, Jonathan; Brunini, Victor; Collins, Lincoln; Knaus, Robert C.; Kucala, Alec; Lin, Stephen E.; Moser, Daniel R.; Phillips, Malachi; Subia, Samuel R.; Vasyliv, Yaroslav V.; Voskuilen, Tyler; Carnes, Brian; Lamb, Justin M.; Crean, Jared C.

Presented in this document is a portion of the tests that exist in the Sierra Thermal/Fluids verification test suite. Each of these tests is run nightly with the Sierra/TF code suite and the results of the test checked under mesh refinement against the correct analytic result. For each of the tests presented in this document the test setup, derivation of the analytic solution, and comparison of the code results to the analytic solution is provided.

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SIERRA Code Coupling Module: Arpeggio User Manual - Version 5.26

Clausen, Jonathan; Brunini, Victor; Collins, Lincoln; Knaus, Robert C.; Kucala, Alec; Lin, Stephen E.; Moser, Daniel R.; Phillips, Malachi; Subia, Samuel R.; Vasyliv, Yaroslav V.; Voskuilen, Tyler; Lamb, Justin M.; Crean, Jared C.

The SNL Sierra Mechanics code suite is designed to enable simulation of complex multiphysics scenarios. The code suite is composed of several specialized applications which can operate either in standalone mode or coupled with each other. Arpeggio is a supported utility that enables loose coupling of the various Sierra Mechanics applications by providing access to Framework services that facilitate the coupling.

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Material Control & Accounting Modeling Developments for a Generic TRISO Fuel Fabrication Facility

Pulido, Ramon; Rivas, Tania; Shoman, Nathan

The SNL-developed F3M and MAPIT tools have the capability to analyze MC&A approaches for nuclear facilities via facility process flow simulation and statistical tests. Improvements on the application of F3M and MAPIT in simulating a generic TRISO fuel fabrication facility were successfully completed. This modeling framework can support the U.S. DOE and industry stakeholders in developing MC&A approaches for fuel fabrication facilities via demonstration of regulatory compliance.

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A comparative study of calibration techniques for finite strain elastoplasticity: Numerically-exact sensitivities for FEMU and VFM

Computer Methods in Applied Mechanics and Engineering

Seidl, D.T.; Granzow, Brian N.; Kumar, Sanjeev; Yang, Jin; Fuhg, Jan N.

Accurate identification of material parameters is crucial for predictive modeling in computational mechanics. The two primary approaches in the experimental mechanics community for calibration from full-field digital image correlation data are known as finite element model updating (FEMU) and the virtual fields method (VFM). In VFM, the objective function is a squared mismatch between internal and external virtual work or power. In FEMU, the objective function quantifies the weighted mismatch between model predictions and corresponding experimentally measured quantities of interest. It is minimized by iteratively updating the parameters of an FE model. While FEMU is seen as more flexible, VFM is commonly used instead of FEMU due to its considerably greater computational expense. However, comparisons between the two methods usually involve approximations of gradients or sensitivities with finite difference schemes, thereby making direct assessments difficult. Hence, in this study, we compare VFM and FEMU in the context of numerically-exact sensitivities obtained through local sensitivity analyses and the application of automatic differentiation software. To this end, we conduct a series of test cases to assess both methods under practical challenges using a finite strain elastoplasticity model.

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SIERRA Low Mach Module: Fuego Verification Manual - Version 5.26

Clausen, Jonathan; Brunini, Victor; Collins, Lincoln; Knaus, Robert C.; Kucala, Alec; Lin, Stephen E.; Moser, Daniel R.; Phillips, Malachi; Subia, Samuel R.; Vasyliv, Yaroslav V.; Voskuilen, Tyler; Lamb, Justin M.; Crean, Jared C.

The SIERRA Low Mach Module: Fuego, henceforth referred to as Fuego, is the key element of the ASC fire environment simulation project. The fire environment simulation project is directed at characterizing both open large-scale pool fires and building enclosure fires. Fuego represents the turbulent, buoyantly-driven incompressible flow, heat transfer, mass transfer, combustion, soot, and absorption coefficient model portion of the simulation software.

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MPACT Safeguards Modeling: FY25 Update

Shoman, Nathan; Taconi, Anna M.; Rivas, Tania; Pulido, Ramon; Honnold, Philip

This report summarizes accomplishments in the development and maintenance of modeling and simulation tools to support material accountancy of bulk nuclear facilities. In FY25, we added new capabilities to MAPIT (new statistical test, improved error handling), launched the open source F3M modeling library, and added three new facility models to the SSPM-L model library.

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A Curated Dataset of Regional Meteor Events with Simultaneous Optical and Infrasound Observations (2006–2011)

Data

Silber, Elizabeth A.; Brown, Emerson; Thompson, Andrea R.; Sawal, Vedant

We present a curated, openly accessible dataset of 71 regional meteor events simultaneously recorded by optical and infrasound instrumentation between 2006 and 2011. These events were captured during an observational campaign using the all-sky cameras of the Southern Ontario Meteor Network and the co-located Elginfield Infrasound Array. Each entry provides optical trajectory measurements, infrasound waveforms, and atmospheric specification profiles. The integration of optical and acoustic data enables robust linkage between observed acoustic signals and specific points along meteor trajectories, offering new opportunities to examine shock wave generation, propagation, and energy deposition processes. This release fills a critical observational gap by providing the first validated, openly accessible archive of simultaneous optical–infrasound meteor observations that supports trajectory reconstruction, acoustic propagation modeling, and energy deposition analyses. By making these data openly available in a structured format, this work establishes a durable reference resource that advances reproducibility, fosters cross-disciplinary research, and underpins future developments in meteor physics, atmospheric acoustics, and planetary defense. Dataset: https://doi.org/10.5281/zenodo.15868512. Dataset License: CC-BY-NC

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