Lankiewicz, Thomas S.; Choudhary, Hemant; Gao, Yu; Amer, Bashar; Lillington, Stephen P.; Leggieri, Patrick A.; Brown, Jennifer L.; Swift, Candice L.; Lipzen, Anna; Na, Hyunsoo; Amirebrahimi, Mojgan; Theodorou, Michael K.; Baidoo, Edward E.K.; Barry, Kerrie; Grigoriev, Igor V.; Timokhin, Vitaliy I.; Gladden, John M.; Singh, Seema S.; Mortimer, Jenny C.; Ralph, John; Simmons, Blake A.; Singer, Steven W.; O'Malley, Michelle A.
Lignocellulose forms plant cell walls, and its three constituent polymers, cellulose, hemicellulose and lignin, represent the largest renewable organic carbon pool in the terrestrial biosphere. Insights into biological lignocellulose deconstruction inform understandings of global carbon sequestration dynamics and provide inspiration for biotechnologies seeking to address the current climate crisis by producing renewable chemicals from plant biomass. Organisms in diverse environments disassemble lignocellulose, and carbohydrate degradation processes are well defined, but biological lignin deconstruction is described only in aerobic systems. It is currently unclear whether anaerobic lignin deconstruction is impossible because of biochemical constraints or, alternatively, has not yet been measured. We applied whole cell-wall nuclear magnetic resonance, gel-permeation chromatography and transcriptome sequencing to interrogate the apparent paradox that anaerobic fungi (Neocallimastigomycetes), well-documented lignocellulose degradation specialists, are unable to modify lignin. We find that Neocallimastigomycetes anaerobically break chemical bonds in grass and hardwood lignins, and we further associate upregulated gene products with the observed lignocellulose deconstruction. These findings alter perceptions of lignin deconstruction by anaerobes and provide opportunities to advance decarbonization biotechnologies that depend on depolymerizing lignocellulose.
The marine energy (ME) industry historically lacked a standardized data processing toolkit for common tasks such as data ingestion, quality control, and visualization. The marine and hydrokinetic toolkit (MHKiT) solved this issue by providing a public software deployment (open-source and free) toolkit for the ME industry to store and maintain commonly used functionality for wave, tidal, and river energy. This paper demonstrates an initial model verification study in MHKiT. Using Delft3D, a numerical model of the Tanana River Test Site (TRTS) at Nenana, Alaska was created. Field data from the site was collected using an Acoustic Doppler Current Profiler (ADCP) at the proposed Current Energy Converter (CEC) locations. MHKiT is used to process model simulations from Delft3D and compare them to the transect data from the ADCP measurements at TRTS. The ability to use a single tool to process simulation and field data demonstrates the ease at which the ME industry can obtain results and collaborate across specialties, reducing errors and increasing efficiency.
Sandia’s Grid Modernization and Energy Storage program works to advance a national vision of a secure, resilient, and sustainable electric system for all users. Our achievements reflect a strategic approach combining technology development; modeling, simulation, and data analytics; and partnered demonstrations and outreach to further the adoption of advanced grid and storage technologies. Our FY22 efforts leverage the strengths of our partnerships—spanning Sandia’s core science and technology competencies as well as external technology leaders—to develop the solutions today which enable the grid of tomorrow. Much of the material in this report comes from the separate 2022 Accomplishments Report compiled by our Energy Storage subprogram team, a cornerstone of our grid research and achievements. The Grid Energy Storage Program at Sandia is focused on making energy storage cost-effective through research and development (R&D) in new battery technologies, advanced power electronics and power conversion systems, improved safety and reliability for energy storage systems, analytical tools for the valuation of energy storage, and the validation of new energy storage technologies through demonstration projects. During the 2022 fiscal year, Sandia executed R&D work supported by the U.S. Department of Energy’s (DOE) Office of Electricity – Energy Storage Program under the leadership of Dr. Imre Gyuk. This report indicates key areas of research and engagement and summarizes the impact of Sandia’s contributions through notable accomplishments, journal publications, patents, and technical conferences and presentations. It is provided with the hope that readers discover ways we can further team to create our modern grid and apply the outcomes of our efforts. The bulk of work described herein is funded by the DOE Office of Electricity and key programs within the DOE Office of Energy Efficiency and Renewable Energy. As we indicated in our report from last year, the contributors to our successes are too numerous to name here, though our team wishes to express our deep gratitude to the numerous program and project sponsors at the US Department of Energy, who often function equally as technical collaborators; our many partners in industry, academia, utilities, and other national labs; and fellow researchers and business partners at Sandia whose leadership and creativity have enabled the accomplishments described herein.
Radiation-hard high-voltage vertical GaN p-n diodes are being developed for use in power electronics subjected to ionizing radiation. We present a comparison of the measured and simulated photocurrent response of diodes exposed to ionizing irradiation with 70 keV and 20 MeV electrons at dose rates in the range of 1.4× 107 - 5.0× 108 rad(GaN)/s. The simulations correctly predict the trend in the measured steady-state photocurrent and agree with the experimental results within a factor of 2. Furthermore, simulations of the transient photocurrent response to dose rates with uniform and non-uniform ionization depth profiles uncover the physical processes involved that cannot be otherwise experimentally observed due to orders of magnitude larger RC time constant of the test circuit. The simulations were performed using an eXploratory Physics Development code developed at Sandia National Laboratories. The code offers the capability to include defect physics under more general conditions, not included in commercially available software packages, extending the applicability of the simulations to different types of radiation environments.
Barekzi, Nazir; Wilkins, Meagan N.; Williams, Aumon L.; Moore, Afiya J.; Duckett, Zachary R.; Tindall, Danielle M.; Eaddy, Donnetta R.; Johnson, Mary B.; Bass, Malcolm; Mageeney, Catherine M.
Bassalto is a newly isolated phage of Mycobacterium smegmatis mc2155 from the campus grounds of Norfolk State University in Norfolk, VA. Bassalto belongs to the cluster B and subcluster B3 mycobacteriophages, based on the nucleotide composition and comparison to known mycobacteriophages.
The computational modeling of nearly incompressible materials is a difficult task for many numerical methods, and even after several decades of investigation, it is still an active research area. This report seeks to address the treatment of incompressible materials in meshfree methods using a synergistic combination of two treatments. The first treatment is an $\bar{F}$ method, where the decomposed dilatational and deviatoric parts are calculated over different smoothing domains. The second treatment “activates” additional nodes throughout the domain to increase the flexibility of the model. We implement this synergistic combination in the context of the reproducing kernel particle method (RKPM) and present results for the Cook’s membrane benchmark problem. The results are compared with those using the composite tet10 finite element with a volume-averaged J formulation. We show that the combined treatment is an effective way to deal with nearly incompressible materials in a meshfree framework and compares well with other highly-effective treatments.
ATP-5 aluminum alloy was considered as an alternative to 6061-T651 aluminum alloy to minimize machining distortion. ATP-5 is a proprietary cast alloy that is compositionally similar to 5083 aluminum and is purported to have excellent machinability, stability, and corrosion response. Dimensional stability tests, mechanical testing, chemical analysis, microstructural analysis, and fractography were completed to understand the metallurgy of the ATP-5 alloy and assess its potential as a 6061-T651 alloy alternative. Ultimately, the ATP-5 was found to retain dimensional stability issues, albeit to a lesser extent, relative to the 6061-T651 alloy. Combined with the residual cast structure observed microstructurally and lot-to-lot mechanical property variation, the alloy was deemed not suitable for a structural application. Alternative uses of ATP-5 include tooling, molds, vacuum chucks, fixtures, and jigs, where the material can shine in non-load bearing applications with a need for dimensional control and machinability.
In this report, we developed and validated a network protector relay digital twin model and interfaced a commonly used network protector relay hardware with our real-time simulation system. Hardware-in-the-loop protection studies are performed to assess the impact of distributed energy resources (DER) and benchmark a rate-of-change-based mitigation strategy. Simulation results suggest that the network protector reverse trip and auto-reclose functions are negatively impacted by the high distributed energy resource penetration. To accommodate DER backfeed while remaining secure and reliable for faults on primary feeders, we recommend options for a rate-of-change-based blocking scheme and a protection setting change. Finally, future mitigation ideas and standard revisions are discussed.
Confidence assessment is critical for effective automatic target recognition (ATR). Productive use and interpretation of ATR results by analysts or downstream algorithms requires not only algorithmic declarations of target presence and identity, but also algorithmic assessment of the certainty of those declarations in comparison to the certainties of alternative target-identity possibilities. Unfortunately, despite its importance, confidence assessment is an understudied, underdeveloped, and often-neglected function of ATR systems. This lack of regard stems not only from the difficulty of accurate algorithmic determination of target-identity certainty, but also from a general lack of understanding and careful consideration about what confidence should actually represent. We present a framework for confidence assessment that establishes a clear definition of confidence and provides a straightforward theoretical basis for its calculation. This framework is grounded in a hypothesis-theoretic consideration of ATR and it springs from from a handful of axiomatic principles concerning the nature and meaning of confidence in this context. This framework establishes a rigorous mathematical definition of confidence and it provides equations relating confidence to other information that is almost always provided by ATRs. We present an approach for computing confidence within this framework, using an advance process of ATR characterization followed by a simple computation at the time of ATR execution. We discuss practical difficulties with our approach, and we suggest methods for effective mitigation of these difficulties in implemented systems.
An analytical expression is derived for the thermal response observed during spontaneous imbibition of water into a dry core of zeolitic tuff. Sample tortuosity, thermal conductivity, and thermal source strength are estimated from fitting an analytical solution to temperature observations during a single laboratory test. The closed-form analytical solution is derived using Green's functions for heat conduction in the limit of “slow” water movement; that is, when advection of thermal energy with the wetting front is negligible. The solution has four free fitting parameters and is efficient for parameter estimation. Laboratory imbibition data used to constrain the model include a time series of the mass of water imbibed, visual location of the wetting front through time, and temperature time series at six locations. The thermal front reached the end of the core hours before the visible wetting front. Thus, the predominant form of heating during imbibition in this zeolitic tuff is due to vapor adsorption in dry zeolitic rock ahead of the wetting front. The separation of the wetting front and thermal front in this zeolitic tuff is significant, compared to wetting front behavior of most materials reported in the literature. This work is the first interpretation of a thermal imbibition response to estimate transport (tortuosity) and thermal properties (including thermal conductivity) from a single laboratory test.
This report describes the creation process and final content of a spectral irradiance dataset for Albuquerque, New Mexico accompanied by a set of spectral response measurements for modules deployed at the same location. The spectral irradiance measurements were made using horizontally mounted spectroradiometers; therefore, they represent global horizontal irradiance. The dataset combines non-continuous spectroradiometer and weather measurements from a two-year period into a single calendar year. The data files are accompanied by extensive metadata as well as example calculations and graphs to demonstrate the potential uses of this database. The spectral response measurements were carried out by the National Renewable Energy Laboratory using 12 commercial silicon modules types that are undergoing long-term evaluation at Sandia National Laboratories in Albuquerque.
Software reverse engineering (RE) requires analysts to closely read and make decisions about code. Little is known about what makes an analyst successful, making it difficult to train new analysts or design tools to augment existing ones. The goal of this project was to quantify the eye movement behaviors supporting RE and code comprehension more generally. We applied eye-tracking methods from the language comprehension literature to understand where analysts direct their attention over time when completing tasks (e.g., function identification, bug detection). Across three studies, we manipulated aspects of code hypothesized to impact comprehension (e.g., variable name meaningfulness, code complexity) and presentation methods (e.g., line-by-line, free viewing, gaze-contingent moving window) to understand effects on accuracy and gaze patterns. Results showed clear benefits of meaningful variable names, and effects of expertise on global and line-specific viewing patterns. Findings could inspire empirically-supported tool or analytic adaptations that help to reduce analyst workload.
For computational physics simulations, code verification plays a major role in establishing the credibility of the results by assessing the correctness of the implementation of the underlying numerical methods. In computational electromagnetics, surface integral equations, such as the method-of-moments implementation of the magnetic-field integral equation, are frequently used to solve Maxwell's equations on the surfaces of electromagnetic scatterers. These electromagnetic surface integral equations yield many code-verification challenges due to the various sources of numerical error and their possible interactions. In this paper, we provide approaches to separately measure the numerical errors arising from these different error sources. We demonstrate the effectiveness of these approaches for cases with and without coding errors.
The Source Physics Experiment series is a long-term research and development (R&D) effort under the U.S. Department of Energy’s National Nuclear Security Administration focused on improving the physical understanding of how chemical explosions generate seismoacoustic signals. Beginning in 2011, a series of subsurface chemical explosions in two different and highly contrasting geologies were conducted at the Nevada National Security Site in Nevada, USA with the objective of improving simulation and modeling approaches to explosion identification, yield estimation and other monitoring applications. The two executed phases of the series provide new explosion signature source data from a wide range of geophysical diagnostic equipment; recorded data from the test series is now openly available to the broader seismoacoustic community. This manuscript details the executed test series, deployed seismoacoustic networks, and summarizes major scientific achievements utilizing recorded signatures from the explosive tests.
Pitting corrosion was evaluated on stainless steels 304H, 304, and 316L the surfaces of which had ASTM seawater printed on them as a function of surface roughness after exposure to an exemplar realistic atmospheric diurnal cycle for up to one year. Methods to evaluate pitting damage included optical imaging, scanning electron microscopy imaging, profilometry analysis, and polarization scans. The developed cyclic exposure environment did not significantly influence pitting morphology nor depth in comparison to prior static exposure environments. Cross-hatching was observed in a majority of pits for all material compositions with the roughest surface finish (#4 finish) and in all surface finishes for the 304H composition. Evidence is provided that cross-hatched pit morphologies are caused by slip bands produced during the grinding process for the #4 finish or by material processing. Additionally, micro-cracking was observed in pits formed on samples with the #4 surface finish and was greatly reduced or absent for pits formed on samples with smooth surface finishes. This suggests that both a low RH leading to an MgCl2-dominated environment and a rough surface containing significant residual stress are necessary for micro-cracking. Finally, the use of various characterization techniques and cross sectioning was employed to both qualitatively and quantitatively assess pitting damage across all SS compositions and surface finishes.