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Accurate data-driven surrogates of dynamical systems for forward propagation of uncertainty

International Journal for Numerical Methods in Engineering

De, Saibal; Jones, Reese E.; Kolla, Hemanth

Stochastic collocation (SC) is a well-known non-intrusive method of constructing surrogate models for uncertainty quantification. In dynamical systems, SC is especially suited for full-field uncertainty propagation that characterizes the distributions of the high-dimensional solution fields of a model with stochastic input parameters. However, due to the highly nonlinear nature of the parameter-to-solution map in even the simplest dynamical systems, the constructed SC surrogates are often inaccurate. This work presents an alternative approach, where we apply the SC approximation over the dynamics of the model, rather than the solution. By combining the data-driven sparse identification of nonlinear dynamics framework with SC, we construct dynamics surrogates and integrate them through time to construct the surrogate solutions. We demonstrate that the SC-over-dynamics framework leads to smaller errors, both in terms of the approximated system trajectories as well as the model state distributions, when compared against full-field SC applied to the solutions directly. We present numerical evidence of this improvement using three test problems: a chaotic ordinary differential equation, and two partial differential equations from solid mechanics.

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Equivariant graph convolutional neural networks for the representation of homogenized anisotropic microstructural mechanical response

Computer Methods in Applied Mechanics and Engineering

Jones, Reese E.; Safta, Cosmin; Patel, Ravi

Composite materials with different microstructural material symmetries are common in engineering applications where grain structure, alloying and particle/fiber packing are optimized via controlled manufacturing. In fact these microstructural tunings can be done throughout a part to achieve functional gradation and optimization at a structural level. To predict the performance of particular microstructural configuration and thereby overall performance, constitutive models of materials with microstructure are needed. In this work we provide neural network architectures that provide effective homogenization models of materials with anisotropic components. These models satisfy equivariance and material symmetry principles inherently through a combination of equivariant and tensor basis operations. We demonstrate them on datasets of stochastic volume elements with different textures and phases where the material undergoes elastic and plastic deformation, and show that the these network architectures provide significant performance improvements.

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Poromechanical cohesive interface element with combined Mode I-II cohesive zone elastoplasticity for simulating fracture in fluid-saturated porous media

Computers and Structures

Rimsza, Jessica; Jones, Reese E.; Regueiro, Richard A.; Jadaan, Dafer K.

A combined Mode I-II cohesive zone (CZ) elasto-plastic constitutive model, and a two-dimensional (2D) cohesive interface element (CIE) are formulated and implemented at small strain within an ABAQUS User Element (UEL) for simulating 2D crack nucleation and propagation in fluid-saturated porous media. The CZ model mitigates problems of convergence for the global Newton-Raphson solver within ABAQUS, which when combined with a viscous stabilization procedure allows for simulation of post-peak response under load control for coupled poromechanical finite element analysis, such as concrete gravity dam stability analysis. Verification examples are presented, along with a more complex ambient limestone-concrete wedge fracture experiment, water-pressurized concrete wedge experiment, and concrete gravity dam stability analyses. A calibration procedure for estimating the CZ parameters is demonstrated with the limestone-concrete wedge fracture process. For the water-pressurized concrete wedge fracture experiment it is shown that the inherent time-dependence of the poromechanical CIE analysis provides a good match with experimental force versus displacement results at various crack mouth opening rates, yet misses the pore water pressure evolution ahead of the crack tip propagation. This is likely a result of the concrete being partially-saturated in the experiment, whereas the finite element analysis assumes fully water saturated concrete. For the concrete gravity dam analysis, it is shown that base crack opening and associated water uplift pressure leads to a reduced Factor of Safety, which is confirmed by separate analytical calculations.

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Polyconvex neural network models of thermoelasticity

Journal of the Mechanics and Physics of Solids

Fuhg, Jan N.; Jadoon, Asghar; Seidl, D.T.; Jones, Reese E.

Machine-learning function representations such as neural networks have proven to be excellent constructs for constitutive modeling due to their flexibility to represent highly nonlinear data and their ability to incorporate constitutive constraints, which also allows them to generalize well to unseen data. In this work, we extend a polyconvex hyperelastic neural network framework to (isotropic) thermo-hyperelasticity by specifying the thermodynamic and material theoretic requirements for an expansion of the Helmholtz free energy expressed in terms of deformation invariants and temperature. Different formulations which a priori ensure polyconvexity with respect to deformation and concavity with respect to temperature are proposed and discussed. The physics-augmented neural networks are furthermore calibrated with a recently proposed sparsification algorithm that not only aims to fit the training data but also penalizes the number of active parameters, which prevents overfitting in the low data regime and promotes generalization. The performance of the proposed framework is demonstrated on synthetic data, which illustrate the expected thermomechanical phenomena, and existing temperature-dependent uniaxial tension and tension-torsion experimental datasets.

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Inelastic relaxation processes in amorphous sodium silicates

Journal of the American Ceramic Society

Rimsza, Jessica; Jones, Reese E.

During fracture amorphous oxides exhibit irreversible processes, including inelastic and nonrecoverable relaxation effects in the process zone surrounding the crack tip. Here, classical molecular dynamics simulations were used with a reactive forcefield to evaluate inelastic relaxation processes in five amorphous sodium silicate compositions. Overall, the 20% Na2O-SiO2(NS20) composition exhibited the most inelastic relaxation, followed by the 15% Na2O-SiO2(NS15) composition, the 25% Na2O-SiO2(NS25) composition, and finally the 10% (NS10) and 30% (NS30) Na2O-SiO2 compositions. Coordination analysis of the Na+ ions identified that during inelastic relaxation the Na+ ions were increasingly coordinated by nonbridging oxygens (NBOs) for the NS10 and NS15 compositions, which was supported by radial analysis of the O-Na-O bond angles surrounding the crack tip. Across the sodium silicate compositional range, two different inelastic relaxation mechanism were identified based on the amount of bridging oxygens (BOs) and NBOs in the Na+ ion coordination shell. At lower (NS10) and higher (NS30) sodium compositions, the entire structured relaxed toward the crack tip. In contrast at intermediate sodium concentrations (NS20) the Na+ ion migrates toward the crack tip separately from the network structure. By developing a fundamental understanding of how modified silica systems respond to static stress fields, we will be able to predict how varying amorphous silicate systems exhibit slow crack growth.

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Distributed Asynchronous Contact Mechanics with DARMA/vt

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Morales, Nicolas; Jones, Reese E.; Lifflander, Jonathan J.; Pebay, Philippe P.; Mcgovern, Sean T.; Skrzynski, Cezary; Schilly, Caleb

Contact mechanics, or the modeling of the impenetrability of solid objects, is fundamental to computational solid mechanics (CSM) applications yet is oftentimes the most challenging in terms of computational efficiency and performance. These challenges arise from the irregularity and highly dynamic nature of contact simulation, particularly with algorithms designed for distributed memory architectures. First among these challenges is the inherent load imbalance when distributing contact load across compute nodes. This imbalance is highly problem dependent, and relates to the surface area of contact manifolds and the volume around them, rather than the distribution of the mesh over compute nodes, meaning the application load can vary drastically over different phases. The dynamic nature of contact problems motivates the use of distributed asynchronous many-tasking (AMT) frameworks to efficiently handle irregular workloads. In this paper, we present our work on distBVH, a distributed contact solution using the DARMA/vt library for asynchronous tasking that is also capable of running on-node Kokkos-based kernels. We explore how distBVH addresses the various challenges of CSM contact problems. We evaluate the use of many of DARMA/vt’s dynamic load balancers and demonstrate how our load balancing approach can provide significant performance improvements on various computational solid mechanics benchmarks. Additionally, we show how our approach can take advantage of DARMA/vt for tasking and efficient on-node kernels using Kokkos to scale over hundreds of processing elements.

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Trust-Enhancing Probabilistic Transfer Learning for Sparse and Noisy Data Environments

Bridgman, Wyatt; Balakrishnan, Uma; Soriano, Bruno S.; Jung, Kisung; Wang, Fulton; Jacobs, Justin W.; Jones, Reese E.; Rushdi, Ahmad; Chen, Jacqueline H.; Khalil, Mohammad

There is an increasing aspiration to utilize machine learning (ML) for various tasks of relevance to national security. ML models have thus far been mostly applied to tasks and domains that, while impactful, have sufficient volume of data. For predictive tasks of national security relevance, ML models of great capacity (ability to approximate nonlinear trends in input-output maps) are often needed to capture the complex underlying physics. However, scientific problems of relevance to national security are often accompanied by various sources of sparse and/or incomplete data, including experiments and simulations, across different regimes of operation, of varying degrees of fidelity, and include noise with different characteristics and/or intensity. State-of-the-art ML models, despite exhibiting superior performance on the task and domain they were trained on, may suffer detrimental loss in performance in such sparse data environments. This report summarizes the results of the Laboratory Directed Research and Development project entitled Trust-Enhancing Probabilistic Transfer Learning for Sparse and Noisy Data Environments. The objective of the project was to develop a new transfer learning (TL) framework that aims to adaptively blend the data across different sources in tackling one task of interest, resulting in enhanced trustworthiness of ML models for mission- and safety-critical systems. The proposed framework determines when it is worth applying TL and how much knowledge is to be transferred, despite uncontrollable uncertainties. The framework accomplishes this by leveraging concepts and techniques from the fields of Bayesian inverse modeling and uncertainty quantification, relying on strong mathematical foundations of probability and measure theories to devise new uncertainty-aware TL workflows.

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Robust scalable initialization for Bayesian variational inference with multi-modal Laplace approximations

Probabilistic Engineering Mechanics

Bridgman, Wyatt; Jones, Reese E.; Khalil, Mohammad

Predictive modeling typically relies on Bayesian model calibration to provide uncertainty quantification. Variational inference utilizing fully independent (“mean-field”) Gaussian distributions are often used as approximate probability density functions. This simplification is attractive since the number of variational parameters grows only linearly with the number of unknown model parameters. However, the resulting diagonal covariance structure and unimodal behavior can be too restrictive to provide useful approximations of intractable Bayesian posteriors that exhibit highly non-Gaussian behavior, including multimodality. High-fidelity surrogate posteriors for these problems can be obtained by considering the family of Gaussian mixtures. Gaussian mixtures are capable of capturing multiple modes and approximating any distribution to an arbitrary degree of accuracy, while maintaining some analytical tractability. Unfortunately, variational inference using Gaussian mixtures with full-covariance structures suffers from a quadratic growth in variational parameters with the number of model parameters. The existence of multiple local minima due to strong nonconvex trends in the loss functions often associated with variational inference present additional complications, These challenges motivate the need for robust initialization procedures to improve the performance and computational scalability of variational inference with mixture models. In this work, we propose a method for constructing an initial Gaussian mixture model approximation that can be used to warm-start the iterative solvers for variational inference. The procedure begins with a global optimization stage in model parameter space. In this step, local gradient-based optimization, globalized through multistart, is used to determine a set of local maxima, which we take to approximate the mixture component centers. Around each mode, a local Gaussian approximation is constructed via the Laplace approximation. Finally, the mixture weights are determined through constrained least squares regression. The robustness and scalability of the proposed methodology is demonstrated through application to an ensemble of synthetic tests using high-dimensional, multimodal probability density functions. Here, the practical aspects of the approach are demonstrated with inversion problems in structural dynamics.

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Modular machine learning-based elastoplasticity: Generalization in the context of limited data

Computer Methods in Applied Mechanics and Engineering

Fuhg, Jan N.; Hamel, Craig; Johnson, Kyle L.; Jones, Reese E.; Bouklas, Nikolaos

The development of highly accurate constitutive models for materials that undergo path-dependent processes continues to be a complex challenge in computational solid mechanics. Challenges arise both in considering the appropriate model assumptions and from the viewpoint of data availability, verification, and validation. Recently, data-driven modeling approaches have been proposed that aim to establish stress-evolution laws that avoid user-chosen functional forms by relying on machine learning representations and algorithms. However, these approaches not only require a significant amount of data but also need data that probes the full stress space with a variety of complex loading paths. Furthermore, they rarely enforce all necessary thermodynamic principles as hard constraints. Hence, they are in particular not suitable for low-data or limited-data regimes, where the first arises from the cost of obtaining the data and the latter from the experimental limitations of obtaining labeled data, which is commonly the case in engineering applications. In this work, we discuss a hybrid framework that can work on a variable amount of data by relying on the modularity of the elastoplasticity formulation where each component of the model can be chosen to be either a classical phenomenological or a data-driven model depending on the amount of available information and the complexity of the response. The method is tested on synthetic uniaxial data coming from simulations as well as cyclic experimental data for structural materials. The discovered material models are found to not only interpolate well but also allow for accurate extrapolation in a thermodynamically consistent manner far outside the domain of the training data. This ability to extrapolate from limited data was the main reason for the early and continued success of phenomenological models and the main shortcoming in machine learning-enabled constitutive modeling approaches. Training aspects and details of the implementation of these models into Finite Element simulations are discussed and analyzed.

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Fracture mechanisms of sodium silicate glasses

International Journal of Applied Glass Science

Rimsza, Jessica; Jones, Reese E.

Reactive classical molecular dynamics simulations of sodium silicate glasses, xNa2O–(100 − x)SiO2 (x = 10–30), under quasi-static loading, were performed for the analysis of molecular scale fracture mechanisms. Mechanical properties of the sodium silicate glasses were consistent with experimentally reported values, and the amount of crack propagation varied with reported fracture toughness values. The most crack propagation occurred in NS20 systems (20-mol% Na2O) compared with the other simulated compositions. Dissipation via two mechanisms, the first through sodium migration as a lower activation energy process and the second through structural rearrangement as a higher activation energy process, was calculated and accounted for the energy that was not stored elastically or associated with the formation of new fracture surfaces. A correlation between crack propagation and energy dissipation was identified, with systems with higher crack propagation exhibiting less energy dissipation. Sodium silicate glass compositions with lower energy dissipation also exhibited the most sodium movement and structural rearrangement within 10 Å of the crack tip during loading. Therefore, high sodium mobility near the crack tip may enable energy dissipation without requiring formation of structural defects. Therefore, the varying mobilities of the network modifiers near crack tips influence the brittleness and the crack growth rate of modified amorphous oxide systems.

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The effect of differential mineral shrinkage on crack formation and network geometry

Scientific Reports

Trageser, Jeremy; Mitchell, Chven A.M.; Jones, Reese E.; Matteo, Edward N.; Rimsza, Jessica; Pyrak-Nolte, Laura J.

Rock, concrete, and other engineered materials are often composed of several minerals that change volumetrically in response to variations in the moisture content of the local environment. Such differential shrinkage is caused by varying shrinkage rates between mineral compositions during dehydration. Using both 3D X-ray imaging of geo-architected samples and peridynamic (PD) numerical simulations, we show that the spatial distribution of the clay affects the crack network geometry with distributed clay particles yielding the most complex crack networks and percent damage (99.56%), along with a 60% reduction in material strength. We also demonstrate that crack formation, growth, coalescence, and distribution during dehydration, are controlled by the differential shrinkage rates between a highly shrinkable clay and a homogeneous mortar matrix. Sensitivity tests performed with the PD models show a clay shrinkage parameter of 0.4 yields considerable damage, and reductions in the parameter can result in a significant reduction in fracturing and an increase in material strength. Additionally, isolated clay inclusions induced localized fracturing predominantly due to debonding between the clay and matrix. These insights indicate differential shrinkage is a source of potential failure in natural and engineered barriers used to sequester anthropogenic waste.

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Comprehensive uncertainty quantification (UQ) for full engineering models by solving probability density function (PDF) equation

Kolla, Hemanth; De, Saibal; Jones, Reese E.; Hansen, Michael A.; Plews, Julia A.

This report details a new method for propagating parameter uncertainty (forward uncertainty quantification) in partial differential equations (PDE) based computational mechanics applications. The method provides full-field quantities of interest by solving for the joint probability density function (PDF) equations which are implied by the PDEs with uncertain parameters. Full-field uncertainty quantification enables the design of complex systems where quantities of interest, such as failure points, are not known apriori. The method, motivated by the well-known probability density function (PDF) propagation method of turbulence modeling, uses an ensemble of solutions to provide the joint PDF of desired quantities at every point in the domain. A small subset of the ensemble is computed exactly, and the remainder of the samples are computed with approximation of the driving (dynamics) term of the PDEs based on those exact solutions. Although the proposed method has commonalities with traditional interpolatory stochastic collocation methods applied directly to quantities of interest, it is distinct and exploits the parameter dependence and smoothness of the dynamics term of the governing PDEs. The efficacy of the method is demonstrated by applying it to two target problems: solid mechanics explicit dynamics with uncertain material model parameters, and reacting hypersonic fluid mechanics with uncertain chemical kinetic rate parameters. A minimally invasive implementation of the method for representative codes SPARC (reacting hypersonics) and NimbleSM (finite- element solid mechanics) and associated software details are described. For solid mechanics demonstration problems the method shows order of magnitudes improvement in accuracy over traditional stochastic collocation. For the reacting hypersonics problem, the method is implemented as a streamline integration and results show very good accuracy for the approximate sample solutions of re-entry flow past the Apollo capsule geometry at Mach 30.

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Stress Intensity Thresholds for Development of Reliable Brittle Materials

Rimsza, Jessica; Strong, Kevin T.; Buche, Michael R.; Jones, Reese E.; Nakakura, Craig Y.; Weyrauch, Noah; Brow, Richard; Duree, Jessica M.; Stephens, Kelly S.; Grutzik, S.J.

Brittle material failure in high consequence systems can appear random and unpredictable at subcritical stresses. Gaps in our understanding of how structural flaws and environmental factors (humidity, temperature) impact fracture propagation need to be addressed to circumvent this issue. A combined experimental and computational approach composed of molecular dynamics (MD) simulations, numerical modeling, and atomic force microscopy (AFM) has been undertaken to identify mechanisms of slow crack growth in silicate glasses. AFM characterization of crack growth as slow as 10-13 m/s was observed, with some stepwise crack growth. MD simulations have identified the critical role of inelastic relaxation in crack propagation, including evolution of the structure during relaxation. A numerical model for the existence of a stress intensity threshold, a stress intensity below which a fracture will not propagate, was developed. This transferrable model for predicting slow crack growth is being incorporated into mission-based programs.

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Sensitivity of the strength and toughness of concrete to the properties of the interfacial transition zone

Construction and Building Materials

Torrence, C.E.; Trageser, Jeremy; Jones, Reese E.; Rimsza, Jessica

Civil infrastructure is made primarily of concrete structures or components and therefore understanding durability and fracture behavior of concrete is of utmost importance. Concrete contains an interfacial transition zone (ITZ), a porous region surrounding the aggregates, that is often considered to be the weakest region in the concrete. The ITZ is poorly characterized and property estimates for the ITZ differ considerably. In this simulation study, representative concrete mesostructures are produced by packing coarse aggregates with realistic geometries into a mortar matrix. A meshless numerical method, peridynamics, is utilized to simulate the mechanical response including fracture under uniaxial compression and tension. The sensitivity of the stiffness and fracture toughness of the samples to the ITZ properties is computed, showing strong relationships between the ITZ properties and the effective modulus and effective yield strength of the concrete. These results provides insight into the influence of the poorly characterized ITZ on the stiffness and strength of concrete. This work showcases the applicability of peridynamics to concrete systems, matching experimental strength and modulus values. Additionally, relationships between the ITZ's mechanical properties and the overall concrete strength and stiffness are presented to enable future design decisions.

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Sensitivity of void mediated failure to geometric design features of porous metals

International Journal of Solids and Structures

Teichert, G.H.; Khalil, Mohammad; Alleman, Coleman; Garikipati, K.; Jones, Reese E.

Material produced by current metal additive manufacturing processes is susceptible to variable performance due to imprecise control of internal porosity, surface roughness, and conformity to designed geometry. Using a double U-notched specimen, we investigate the interplay of nominal geometry and porosity in determining ductile failure characteristics during monotonic tensile loading. We simulate the effects of distributed porosity on plasticity and damage using a statistical model based on populations of pores visible in computed tomography scans and additional sub-threshold voids required to match experimental observations of deformation and failure. We interpret the simulation results from a physical viewpoint and provide a statistical model of the probability of failure near stress concentrations. We provide guidance for designs where material defects could cause unexpected failures depending on the relative importance of these defects with respect to features of the nominal geometry.

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A minimally invasive, efficient method for propagation of full-field uncertainty in solid dynamics

International Journal for Numerical Methods in Engineering

Jones, Reese E.; Redle, Michael T.; Kolla, Hemanth; Plews, Julia A.

We present a minimally invasive method for forward propagation of material property uncertainty to full-field quantities of interest in solid dynamics. Full-field uncertainty quantification enables the design of complex systems where quantities of interest, such as failure points, are not known a priori. The method, motivated by the well-known probability density function (PDF) propagation method of turbulence modeling, uses an ensemble of solutions to provide the joint PDF of desired quantities at every point in the domain. A small subset of the ensemble is computed exactly, and the remainder of the samples are computed with approximation of the evolution equations based on those exact solutions. Although the proposed method has commonalities with traditional interpolatory stochastic collocation methods applied directly to quantities of interest, it is distinct and exploits the parameter dependence and smoothness of the driving term of the evolution equations. The implementation is model independent, storage and communication efficient, and straightforward. We demonstrate its efficiency, accuracy, scaling with dimension of the parameter space, and convergence in distribution with two problems: a quasi-one-dimensional bar impact, and a two material notched plate impact. For the bar impact problem, we provide an analytical solution to PDF of the solution fields for method validation. With the notched plate problem, we also demonstrate good parallel efficiency and scaling of the method.

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Integrated Multiphysics Modeling of Environmentally Assisted Brittle Fracture

Rimsza, Jessica; Jones, Reese E.; Trageser, Jeremy; Hogancamp, Joshua; Foulk, James W.; Mitts, Cody; Mitchell, Chven A.M.; Taha, Mahmoud R.; Raby, Patience; Regueiro, Richard A.; Jadaan, Dhafer

Brittle materials, such as cement, compose major portions of built infrastructure and are vulnerable to degradation and fracture from chemo-mechanical effects. Currently, methods of modeling infrastructure do not account for the presence of a reactive environment, such as water, on the acceleration of failure. Here, we have developed methodologies and models of concrete and cement fracture that account for varying material properties, such as strength, shrinkage, and fracture toughness due to degradation or hydration. The models have been incorporated into peridynamics, non-local continuum mechanics methodology, that can model intersecting and branching brittle fracture that occurs in multicomponent brittle materials, such as concrete. Through development of new peridynamic capabilities, decalcification of cement and differential shrinkage in clay-cement composites have been evaluated, along with exemplar problems in nuclear waste cannisters and wellbores. We have developed methods to simulate multiphase phenomena in cement and cement-composite materials for energy and infrastructure applications.

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Effects of Strain Rate and Temperature on the Mechanical Properties of Simulated Silica Ionogels

Journal of Physical Chemistry B

Skelton, R.; Jones, Reese E.

Ionogels are hybrid materials formed by impregnating the pore space of a solid matrix with a conducting ionic liquid. By combining the properties of both component materials, ionogels can act as self-supporting electrolytes in Li batteries. In this study, molecular dynamics simulations are used to investigate the dependence of mechanical properties of silica ionogels on solid fraction, temperature, and pore width. Comparisons are made with corresponding aerogels. We find that the solid matrix fraction increases the moduli and strength of the ionogel. This varies nonlinearly with temperature and strain rate, according to the contribution of the viscous ionic liquid to resisting deformation. Owing to the temperature and strain sensitivity of the ionic liquid viscosity, the mechanical properties approach a linear mixing law at high temperature and low strain rates. The median pore width of the solid matrix plays a complex role, with its influence varying qualitatively with deformation mode. Narrower pores increase the relevant elastic modulus under shear and uniaxial compression but reduce the modulus obtained under uniaxial tension. Conversely, shear and tensile strength are increased by narrowing the pore width. All of these pore size effects become more pronounced as the silica fraction increases. Pore size effects, similar to the effects of temperature and strain rate, are linked to the ease of fluid redistribution within the pore space during deformation-induced changes in the geometry of the pores.

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Simulation of hardened cement degradation and estimation of uncertainty in predicted failure times with peridynamics

Construction and Building Materials

Jones, Reese E.; Rimsza, Jessica; Trageser, Jeremy; Hogancamp, Joshua

Modeling the degradation of cement-based infrastructure due to aqueous environmental conditions continues to be a challenge. In order to develop a capability to predict concrete infrastructure failure due to chemical degradation, we created a chemomechanical model of the effects of long-term water exposure on cement paste. The model couples the mechanical static equilibrium balance with reactive–diffusive transport and incorporates fracture and failure via peridynamics (a meshless simulation method). The model includes fundamental aspects of degradation of ordinary Portland cement (OPC) paste, including the observed softening, reduced toughness, and shrinkage of the cement paste, and increased reactivity and transport with water induced degradation. This version of the model focuses on the first stage of cement paste decalcification, the dissolution of portlandite. Given unknowns in the cement paste degradation process and the cost of uncertainty quantification (UQ), we adopt a minimally complex model in two dimensions (2D) in order to perform sensitivity analysis and UQ. We calibrate the model to existing experimental data using simulations of common tests such as flexure, compression and diffusion. Then we calculate the global sensitivity and uncertainty of predicted failure times based on variation of eleven unique and fundamental material properties. We observed particularly strong sensitivities to the diffusion coefficient, the reaction rate, and the shrinkage with degradation. Also, the predicted time of first fracture is highly correlated with the time to total failure in compression, which implies fracture can indicate impending degradation induced failure; however, the distributions of the two events overlap so the lead time may be minimal. Extension of the model to include the multiple reactions that describe complete degradation, viscous relaxation, post-peak load mechanisms, and to three dimensions to explore the interactions of complex fracture patterns evoked by more realistic geometry is straightforward and ongoing.

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HIERARCHICAL PARALLELISM FOR TRANSIENT SOLID MECHANICS SIMULATIONS

World Congress in Computational Mechanics and ECCOMAS Congress

Littlewood, David J.; Jones, Reese E.; Foulk, James W.; Plews, Julia A.; Hetmaniuk, Ulrich; Lifflander, Jonathan J.

Software development for high-performance scientific computing continues to evolve in response to increased parallelism and the advent of on-node accelerators, in particular GPUs. While these hardware advancements have the potential to significantly reduce turnaround times, they also present implementation and design challenges for engineering codes. We investigate the use of two strategies to mitigate these challenges: the Kokkos library for performance portability across disparate architectures, and the DARMA/vt library for asynchronous many-task scheduling. We investigate the application of Kokkos within the NimbleSM finite element code and the LAMÉ constitutive model library. We explore the performance of DARMA/vt applied to NimbleSM contact mechanics algorithms. Software engineering strategies are discussed, followed by performance analyses of relevant solid mechanics simulations which demonstrate the promise of Kokkos and DARMA/vt for accelerated engineering simulators.

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SNL will be able to provide well-calibrated models to weapons systems analysts by integrating an engine for constitutive model calibration with the GRANTA materials database

Jones, Reese E.

Researchers at Sandia National Laboratories have integrated the GRANTA materials database with the MatCal calibration engine to calibrate material models from characterization data. GRANTA is gaining acceptance across the NNSA Tri-lab complex and is being populated with weapons-specific test data by Sandia experimentalists. To use that data to create material models for use by weapons systems analysts, MatCal has been enabled import calibration data and test conditions from GRANTA to quickly and reproducibly produce a calibrated set of parameters for a given constitutive model. The team is currently working to store the parameters characterizing material behavior in GRANTA to make them accessible by all weapons analysts.

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Modeling strength and failure variability due to porosity in additively manufactured metals

Computer Methods in Applied Mechanics and Engineering

Khalil, Mohammad; Teichert, Gregory H.; Alleman, Coleman; Heckman, Nathan M.; Jones, Reese E.; Garikipati, Krishnakumar; Boyce, Brad L.

To model and quantify the variability in plasticity and failure of additively manufactured metals due to imperfections in their microstructure, we have developed uncertainty quantification methodology based on pseudo marginal likelihood and embedded variability techniques. We account for both the porosity resolvable in computed tomography scans of the initial material and the sub-threshold distribution of voids through a physically motivated model. Calibration of the model indicates that the sub-threshold population of defects dominates the yield and failure response. Finally, the technique also allows us to quantify the distribution of material parameters connected to microstructural variability created by the manufacturing process, and, thereby, make assessments of material quality and process control.

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Tuning the critical Li intercalation concentrations for MoX2 bilayer phase transitions using classical and machine learning approaches

Spataru, Catalin D.; Witman, Matthew D.; Jones, Reese E.

Transition metal dichalcogenides (TMDs) such as MoX2 are known to undergo a structural phase transformation as well as a change in the electronic conductivity upon Li intercalation. These properties make them candidates for charge tunable ion-insertion materials that could be used in electro-chemical devices for neuromorphic computing applications. In this work we study the phase stability and electronic structure of Li-intercalated bilayer MoX2 with X=S, Se or Te. Using first-principles calculations in combination with classical and machine learning modeling approaches we find that the energy needed to stabilize the conductive phase decreases with increasing atomic mass of the chalcogen atom X. A similar decreasing trend is found in the threshold Li concentration where the structural phase transition takes place. While the electronic conductivity increases with increasing ion concentration at low concentrations, we do not observe a conductivity jump at the phase transition point.

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Prediction of the evolution of the stress field of polycrystals undergoing elastic-plastic deformation with a hybrid neural network model

Machine Learning: Science and Technology

Jones, Reese E.; Frankel, A.; Tachida, Kousuke K.

Crystal plasticity theory is often employed to predict the mesoscopic states of polycrystalline metals, and is well-known to be costly to simulate. Using a neural network with convolutional layers encoding correlations in time and space, we were able to predict the evolution of the dominant component of the stress field given only the initial microstructure and external loading. In comparison to our recent work, we were able to predict not only the spatial average of the stress response but the evolution of the field itself. We show that the stress fields and their rates are in good agreement with the two dimensional crystal plasticity data and have no visible artifacts. Furthermore the distribution of stress throughout the elastic to fully plastic transition match the truth provided by held out crystal plasticity data. Lastly we demonstrate the efficacy of the trained model in material characterization and optimization tasks.

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Automated high-throughput tensile testing reveals stochastic process parameter sensitivity

Materials Science and Engineering: A

Heckman, Nathan M.; Ivanoff, Thomas; Roach, Ashley M.; Jared, Bradley H.; Tung, Daniel J.; Huber, Todd; Saiz, David J.; Koepke, Joshua R.; Rodelas, Jeffrey; Madison, Jonathan D.; Salzbrenner, Bradley; Swiler, Laura P.; Jones, Reese E.; Boyce, Brad L.

The mechanical properties of additively manufactured metals tend to show high variability, due largely to the stochastic nature of defect formation during the printing process. This study seeks to understand how automated high throughput testing can be utilized to understand the variable nature of additively manufactured metals at different print conditions, and to allow for statistically meaningful analysis. This is demonstrated by analyzing how different processing parameters, including laser power, scan velocity, and scan pattern, influence the tensile behavior of additively manufactured stainless steel 316L utilizing a newly developed automated test methodology. Microstructural characterization through computed tomography and electron backscatter diffraction is used to understand some of the observed trends in mechanical behavior. Specifically, grain size and morphology are shown to depend on processing parameters and influence the observed mechanical behavior. In the current study, laser-powder bed fusion, also known as selective laser melting or direct metal laser sintering, is shown to produce 316L over a wide processing range without substantial detrimental effect on the tensile properties. Ultimate tensile strengths above 600 MPa, which are greater than that for typical wrought annealed 316L with similar grain sizes, and elongations to failure greater than 40% were observed. It is demonstrated that this process has little sensitivity to minor intentional or unintentional variations in laser velocity and power.

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TENSOR BASIS GAUSSIAN PROCESS MODELS OF HYPERELASTIC MATERIALS

Journal of Machine Learning for Modeling and Computing

Frankel, A.; Jones, Reese E.; Swiler, Laura P.

In this work, we develop Gaussian process regression (GPR) models of isotropic hyperelastic material behavior. First, we consider the direct approach of modeling the components of the Cauchy stress tensor as a function of the components of the Finger stretch tensor in a Gaussian process. We then consider an improvement on this approach that embeds rotational invariance of the stress-stretch constitutive relation in the GPR representation. This approach requires fewer training examples and achieves higher accuracy while maintaining invariance to rotations exactly. Finally, we consider an approach that recovers the strain-energy density function and derives the stress tensor from this potential. Although the error of this model for predicting the stress tensor is higher, the strain-energy density is recovered with high accuracy from limited training data. The approaches presented here are examples of physics-informed machine learning. They go beyond purely data-driven approaches by embedding the physical system constraints directly into the Gaussian process representation of materials models.

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Hydrogen diffusion across interfaces in zirconium

Jones, Reese E.; Reyes, Royce; Zhou, Xiaowang; Foster, Michael E.; Spataru, Catalin D.; Spearot, Doug E.

In order to study the effects of Ni oxidation barriers on H diffusion in Zr, a Ni-Zr-H potential was developed based on an existing Ni-Zr potential. Using this and existing binary potentials H diffusion characteristics were calculated and some limited findings for the performance of Ni on Zr coatings are made.

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Uncertainty Quantification of Microstructural Material Variability Effects

Jones, Reese E.; Boyce, Brad L.; Frankel, A.; Heckman, Nathan M.; Khalil, Mohammad; Ostien, Jakob T.; Rizzi, Francesco; Tachida, Kousuke K.; Teichert, Gregory H.; Templeton, J.A.

This project has developed models of variability of performance to enable robust design and certification. Material variability originating from microstructure has significant effects on component behavior and creates uncertainty in material response. The outcomes of this project are uncertainty quantification (UQ) enabled analysis of material variability effects on performance and methods to evaluate the consequences of microstructural variability on material response in general. Material variability originating from heterogeneous microstructural features, such as grain and pore morphologies, has significant effects on component behavior and creates uncertainty around performance. Current engineering material models typically do not incorporate microstructural variability explicitly, rather functional forms are chosen based on intuition and parameters are selected to reflect mean behavior. Conversely, mesoscale models that capture the microstructural physics, and inherent variability, are impractical to utilize at the engineering scale. Therefore, current efforts ignore physical characteristics of systems that may be the predominant factors for quantifying system reliability. To address this gap we have developed explicit connections between models of microstructural variability and component/system performance. Our focus on variability of mechanical response due to grain and pore distributions enabled us to fully probe these influences on performance and develop a methodology to propagate input variability to output performance. This project is at the forefront of data-science and material modeling. We adapted and innovated from progressive techniques in machine learning and uncertainty quantification to develop a new, physically-based methodology to address the core issues of the Engineering Materials Reliability (EMR) research challenge in modeling constitutive response of materials with significant inherent variability and length-scales.

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Insight into hydrogen production through molecular simulation of an electrode-ionomer electrolyte system

Journal of Chemical Physics

Jones, Reese E.; Tucker, W.C.; Mills, M.J.L.; Yan, Yushan

In this work, we examine metal electrode-ionomer electrolyte systems at high voltage (negative surface charge) and at high pH to assess factors that influence hydrogen production efficiency. We simulate the hydrogen evolution electrode interface investigated experimentally in the work of Bates et al. [J. Phys. Chem. C 119, 5467 (2015)] using a combination of first principles calculations and classical molecular dynamics. With this detailed molecular information, we explore the hypotheses posed in the work of Bates et al. In particular, we examine the response of the system to increased bias voltage and oxide coverage in terms of the potential profile, changes in solvation and species concentrations away from the electrode, surface concentrations, and orientation of water at reactive surface sites. We discuss this response in the context of hydrogen production.

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Bayesian modeling of inconsistent plastic response due to material variability

Computer Methods in Applied Mechanics and Engineering

Rizzi, Francesco; Khalil, Mohammad; Jones, Reese E.; Templeton, J.A.; Ostien, Jakob T.; Boyce, Brad L.

The advent of fabrication techniques such as additive manufacturing has focused attention on the considerable variability of material response due to defects and other microstructural aspects. This variability motivates the development of an enhanced design methodology that incorporates inherent material variability to provide robust predictions of performance. In this work, we develop plasticity models capable of representing the distribution of mechanical responses observed in experiments using traditional plasticity models of the mean response and recently developed uncertainty quantification (UQ) techniques. To account for material response variability through variations in physical parameters, we adapt a recent Bayesian embedded modeling error calibration technique. We use Bayesian model selection to determine the most plausible of a variety of plasticity models and the optimal embedding of parameter variability. To expedite model selection, we develop an adaptive importance-sampling-based numerical integration scheme to compute the Bayesian model evidence. In conclusion, we demonstrate that the new framework provides predictive realizations that are superior to more traditional ones, and how these UQ techniques can be used in model selection and assessing the quality of calibrated physical parameters.

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Mechanisms of silica fracture in aqueous electrolyte solutions

Frontiers in Materials

Rimsza, Jessica; Jones, Reese E.; Criscenti, Louise

Glassy silicates are substantially weaker when in contact with aqueous electrolyte solutions than in vacuum due to chemical interactions with preexisting cracks. To investigate this silicate weakening phenomenon, classical molecular dynamics (MD) simulations of silica fracture were performed using the bond-order based, reactive force field ReaxFF. Four different environmental conditions were investigated: vacuum, water, and two salt solutions (1M NaCl, 1M NaOH) that form relatively acidic and basic solutions, respectively. Any aqueous environment weakens the silica, with NaOH additions resulting in the largest decreases in the effective fracture toughness (eKIC) of silica or the loading rate at which the fracture begins to propagate. The basic solution leads to higher surface deprotonation, narrower radius of curvature of the crack tip, and greater weakening of the silica, compared with the more acidic environment. The results from the two different electrolyte solutions correspond to phenomena observed in experiments and provide a unique atomistic insight into how anions alter the chemical-mechanical fracture response of silica.

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Atomic-scale interaction of a crack and an infiltrating fluid

Chemical Physics Letters: X

Tucker, W.C.; Rimsza, Jessica; Criscenti, Louise; Jones, Reese E.

In this work we investigate the Orowan hypothesis, that decreases in surface energy due to surface adsorbates lead directly to lowered fracture toughness, at an atomic/molecular level. We employ a Lennard-Jones system with a slit crack and an infiltrating fluid, nominally with gold-water properties, and explore steric effects by varying the soft radius of fluid particles and the influence of surface energy/hydrophobicity via the solid–fluid binding energy. Using previously developed methods, we employ the J-integral to quantify the sensitivity of fracture toughness to the influence of the fluid on the crack tip, and exploit dimensionless scaling to discover universal trends in behavior.

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Correlating structure and transport behavior in Li+ and O2 containing pyrrolidinium ionic liquids

Physical Chemistry Chemical Physics

Gittleson, Forrest S.; Ward, Donald K.; Jones, Reese E.; Zarkesh, Ryan A.; Sheth, Tanvi; Foster, Michael E.

Ionic liquids are a unique class of materials with several potential applications in electrochemical energy storage. When used in electrolytes, these highly coordinating solvents can influence device performance through their high viscosities and strong solvation behaviors. In this work, we explore the effects of pyrrolidinium cation structure and Li+ concentration on transport processes in ionic liquid electrolytes. We present correlated experimental measurements and molecular simulations of Li+ mobility and O2 diffusivity, and connect these results to dynamic molecular structural information and device performance. In the context of Li-O2/Li-air battery chemistries, we find that Li+ mobility is largely influenced by Li+-anion coordination, but that both Li+ and O2 diffusion may be affected by variations of the pyrrolidinium cation and Li+ concentration.

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Chemical Effects on Subcritical Fracture in Silica From Molecular Dynamics Simulations

Journal of Geophysical Research: Solid Earth

Rimsza, Jessica; Jones, Reese E.; Criscenti, Louise

Fracture toughness of silicates is reduced in aqueous environments due to water-silica interactions at the crack tip. To investigate this effect, classical molecular dynamics simulations using the bond-order-based reactive force field (ReaxFF) were used to simulate silica fracture. The chemical and mechanical aspects were separated by simulating fracture in (a) a vacuum with dynamic loading, (b) an aqueous environment with dynamic loading, and (c) an aqueous environment with static subcritical mechanical loading to track silica dissolution. The addition of water to silica fracture reduced the silica fracture toughness by ~25%, a trend consistent with experimentally reported results. Analysis of Si─O bonds in the process zone and calculations of dissipation energy associated with fracture indicated that water relaxes the entire process zone and not just the surface. Additionally, the crack tip sharpens during fracture in water and an increased number of microscopic propagation events occur. This results in earlier fracture in systems with increasing mechanical loading in aqueous conditions, despite the lack of significant silica dissolution. Therefore, the threshold for Si─O bond breakage has been lowered in the presence of water and the reduction in fracture toughness is due to structural and energetic changes in the silica, rather than specific dissolution events.

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Chemical-Mechanical Modeling of Subcritical-to-Critical Fracture in Geomaterials

Criscenti, Louise; Rimsza, Jessica; Jones, Reese E.; Matteo, Edward N.; Payne, Clay

Predicting chemical-mechanical fracture initiation and propagation in materials is a critical problem, with broad relevance to a host of geoscience applications including subsurface storage and waste disposal, geothermal energy development, and oil and gas extraction. In this project, we have developed molecular simulation and coarse- graining techniques to obtain an atomistic-level understanding of the chemical- mechanical mechanisms that control subcritical crack propagation in materials under tension and impact the fracture toughness. We have applied these techniques to the fracture of fused quartz in vacuum, in distilled water, and in two salt solutions - 1M NaC1, 1M NaOH - that form relatively acidic and basic solutions respectively. We have also established the capability to conduct double-compression double-cleavage experiments in an environmental chamber to observe material fracture in aqueous solution. Both simulations and experiments indicate that fractures propagate fastest in NaC1 solutions, slower in distilled water, and even slower in air.

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An atomic-scale evaluation of the fracture toughness of silica glass

Journal of Physics Condensed Matter

Jones, Reese E.; Rimsza, Jessica; Criscenti, Louise

Using an atomistic technique consistent with continuum balance laws and drawing on classical fracture mechanics theory, we estimate the resistance to fracture propagation of amorphous silica. We discuss correspondence and deviations from classical linear elastic fracture mechanics theory including size dependence, rigid/floppy modes of deformation, and the effects of surface energy and stress.

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Interaction of NaOH solutions with silica surfaces

Journal of Colloid and Interface Science

Rimsza, Jessica; Jones, Reese E.; Criscenti, Louise

Hypothesis: Sodium adsorption on silica surfaces depends on the solution counter-ion. Here, we use NaOH solutions to investigate basic environments. Simulations: Sodium adsorption on hydroxylated silica surfaces from NaOH solutions were investigated through molecular dynamics with a dissociative force field, allowing for the development of secondary molecular species. Findings: Across the NaOH concentrations (0.01 M − 1.0 M), ∼50% of the Na+ ions were concentrated in the surface region, developing silica surface charges between − 0.01 C/m2 (0.01 M NaOH) and − 0.76 C/m2 (1.0 M NaOH) due to surface site deprotonation. Five inner-sphere adsorption complexes were identified, including monodentate, bidentate, and tridentate configurations and two additional structures, with Na+ ions coordinated by bridging oxygen and hydroxyl groups or water molecules. Coordination of Na+ ions by bridging oxygen atoms indicates partial or complete incorporation of Na+ ions into the silica surface. Residence time analysis identified that Na+ ions coordinated by bridging oxygen atoms stayed adsorbed onto the surface four times longer than the mono/bi/tridentate species, indicating formation of relatively stable and persistent Na+ ion adsorption structures. Such inner-sphere complexes form only at NaOH concentrations of > 0.5 M. Na+ adsorption and lifetimes have implications for the stability of silica surfaces.

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Crack propagation in silica from reactive classical molecular dynamics simulations

Journal of the American Ceramic Society

Rimsza, Jessica; Jones, Reese E.; Criscenti, Louise

Mechanistic insight into the process of crack growth can be obtained through molecular dynamics (MD) simulations. In this investigation of fracture propagation, a slit crack was introduced into an atomistic amorphous silica model and mode I stress was applied through far-field loading until the crack propagates. Atomic displacements and forces and an Irving–Kirkwood method with a Lagrangian kernel estimator were used to calculate the J-integral of classical fracture mechanics around the crack tip. The resulting fracture toughness (KIC), 0.76 ± 0.16 MPa√m, agrees with experimental values. In addition, the stress fields and dissipation energies around the slit crack indicate the development of an inelastic region ~30Å in diameter. This is one of the first reports of KIC values obtained from up-scaled atomic-level energies and stresses through the J-integral. The application of the ReaxFF classical MD force field in this study provides the basis for future research into crack growth in multicomponent oxides in a variety of environmental conditions.

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Influence of defects on the thermal conductivity of compressed LiF

Physical Review B

Jones, Reese E.; Ward, Donald K.

Defect formation in LiF, which is used as an observation window in ramp and shock experiments, has significant effects on its transmission properties. Given the extreme conditions of the experiments it is hard to measure the change in transmission directly. Using molecular dynamics, we estimate the change in conductivity as a function of the concentration of likely point and extended defects using a Green-Kubo technique with careful treatment of size effects. With this data, we form a model of the mean behavior and its estimated error; then, we use this model to predict the conductivity of a large sample of defective LiF resulting from a direct simulation of ramp compression as a demonstration of the accuracy of its predictions. Given estimates of defect densities in a LiF window used in an experiment, the model can be used to correct the observations of thermal energy through the window. In addition, the methodology we develop is extensible to modeling, with quantified uncertainty, the effects of a variety of defects on the thermal conductivity of solid materials.

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Polymorphic improvement of Stillinger-Weber potential for InGaN

Journal of Applied Physics

Zhou, Xiaowang; Jones, Reese E.; Chu, Kevin

A Stillinger-Weber potential is computationally very efficient for molecular dynamics simulations. Despite its simple mathematical form, the Stillinger-Weber potential can be easily parameterized to ensure that crystal structures with tetrahedral bond angles (e.g., diamond-cubic, zinc-blende, and wurtzite) are stable and have the lowest energy. As a result, the Stillinger-Weber potential has been widely used to study a variety of semiconductor elements and alloys. When studying an A-B binary system, however, the Stillinger-Weber potential is associated with two major drawbacks. First, it significantly overestimates the elastic constants of elements A and B, limiting its use for systems involving both compounds and elements (e.g., an A/AB multilayer). Second, it prescribes equal energy for zinc-blende and wurtzite crystals, limiting its use for compounds with large stacking fault energies. Here in this paper, we utilize the polymorphic potential style recently implemented in LAMMPS to develop a modified Stillinger-Weber potential for InGaN that overcomes these two problems.

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Results 1–100 of 253
Results 1–100 of 253