Quantification and Propagation of Uncertainties in Machine Learning Interatomic Potentials for Molecular Dynamics
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The UQ Toolkit (UQTk) is a collection of libraries and tools for the quantification of uncertainty in numerical model predictions. Version 3.1.2 offers intrusive and non-intrusive methods for propagating input uncertainties through computational models, tools for sensitivity analysis, methods for sparse surrogate construction, and Bayesian inference tools for inferring parameters from experimental data. This manual discusses the download and installation process for UQTk, provides pointers to the UQ methods used in the toolkit, and describes some of the examples provided with the toolkit.
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The UQ Toolkit (UQTk) is a collection of libraries and tools for the quantification of uncertainty in numerical model predictions. Version 3.1.1 offers intrusive and non-intrusive methods for propagating input uncertainties through computational models, tools for sensitivity analysis, methods for sparse surrogate construction, and Bayesian inference tools for inferring parameters from experimental data. This manual discusses the download and installation process for UQTk, provides pointers to the UQ methods used in the toolkit, and describes some of the examples provided with the toolkit.
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The UQ Toolkit (UQTk) is a collection of libraries and tools for the quantification of uncertainty in numerical model predictions. Version 3.1.0 offers intrusive and non-intrusive methods for propagating input uncertainties through computational models, tools for sensitivity analysis, methods for sparse surrogate construction, and Bayesian inference tools for inferring parameters from experimental data. This manual discusses the download and installation process for UQTk, provides pointers to the UQ methods used in the toolkit, and describes some of the examples provided with the toolkit.
Demonstrating the thermodynamic efficiency of hydrogen conversion processes using various materials is a critical step in developing new technologies for storing concentrated solar energy, and is largely accomplished by using a thermodynamic model derived from experimental data. A main goal of this project is to calculate the uncertainty of the thermodynamic efficiency by calculating the uncertainty of the components that feed into the efficiency. Many different models and data sets were used to test the workflow. First, the models were fit to the data using a Bayesian Inference and a method called Markov Chain Monte Carlo (MCMC), which found the maximum a priori parameters, and a posterior probability distribution of the parameters. Next, the different models were compared to each other using model evidence values. It was found that for cleaner data sets, overfitting had not yet been reached, and the most complicated model was ideal, but on the noisier data sets, the less complex models were favored because the more complicated models resulted in overfitting. Next, forward propagation was used to calculate the enthalpy change and its associated uncertainty. A few variations on the models were tried, such as fitting in a different variable, producing negligible or negative effects on the fits of the models. Thus, the original models were used. A sensitivity analysis was performed, and used to calculate the model error. On the cleaner data sets, there was very minimal experimental noise, and thus, all resulting error was from the model. With consideration of the model error, the models fit the data very well, and the simpler model had a high model error, as expected. All these components will then be used to calculate the thermodynamic efficiency of the different materials.
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