Publications

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Gait or an individual's manner of walking, is one approach for recognizing people at a distance. Studies in psychophysics and medicine indicate that humans can recognize people by their gait and have found twenty-four different components to gait that taken together make it a unique signature. Besides not requiring close sensor contact, gait also does not necessarily require a cooperative subject. Using video data of people walking in different scenarios and environmental conditions we develop and test an algorithm that uses shape and motion to identify people from their gait. The algorithm uses dynamic time warping to match stored templates against an unknown sequence of silhouettes extracted from a person walking. While results under similar constraints and conditions are very good, the algorithm quickly degrades with varying conditions such as surface and clothing.

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The goal of this LDRD involves development of a system dynamics model to understand the interdependencies between water resource availability and water needs for production of biofuels. Specifically, this model focuses on availability and feasibility of non-traditional water sources from dairy wastewater, produced water from crude oil production and from coal-bed methane gas extraction for the production of algal-based biofuel. The conceptual simulation framework and historical data are based on two locales within New Mexico, the San Juan basin in the northwest and the Permian basin in the southeast, where oil and gas drilling have increased considerably in the last ten years. The overall water balance ignores both transportation options and water chemistry and is broken down by county level. The resulting model contains an algal growth module, a dairy module, an oil production module, and a gas production module. A user interface is also created for controlling the adjustable parameters in the model. Our preliminary investigation indicates a cyclical demand for non-fresh water due to the cyclical nature of algal biomass production and crop evapotranspiration. The wastewater from the dairy industry is not a feasible non-fresh water source because the agricultural water demand for cow's dry feed far exceeds the amount generated at the dairy. The uncertainty associated with the water demand for cow's dry matter intake is the greatest in this model. The oil- and gas-produced water, ignoring the quality, provides ample supply for water demand in algal biomass production. There remains work to address technical challenges associated with coupling the appropriate non-fresh water source to the local demand.

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Techniques for high throughput determinations of interactomes, together with high resolution protein collocalizations maps within organelles and through membranes will soon create a vast resource. With these data, biological descriptions, akin to the high dimensional phase spaces familiar to physicists, will become possible. These descriptions will capture sufficient information to make possible realistic, system-level models of cells. The descriptions and the computational models they enable will require powerful computing techniques. This report is offered as a call to the computational biology community to begin thinking at this scale and as a challenge to develop the required algorithms and codes to make use of the new data.3

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