Publications

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The porosity of clay aggregates is an important property governing chemical reactions and fluid flow in low-permeability geologic formations and clay-based engineered barrier systems. Pore spaces in clays include interlayer and interparticle pores. Under compaction and dewatering, the size and geometry of such pore spaces may vary significantly (sub-nanometer to microns) depending on ambient physical and chemical conditions. Here we report a molecular dynamics simulation method to construct a complex and realistic clay-like nanoparticle aggregate with interparticle pores and grain boundaries. The model structure is then used to investigate the effect of dewatering and water content on micro-porosity of the aggregates. The results suggest that slow dewatering would create more compact aggregates compared to fast dewatering. Furthermore, the amount of water present in the aggregates strongly affects the particle-particle interactions and hence the aggregate structure. Detailed analyses of particle-particle and water-particle interactions provide a molecular-scale view of porosity and texture development of the aggregates. The simulation method developed here may also aid in modeling the synthesis of nanostructured materials through self-assembly of nanoparticles.

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Molecular simulations of the adsorption of representative organic molecules onto the basal surfaces of various clay minerals were used to assess the mechanisms of enhanced oil recovery associated with salinity changes and water flooding. Simulations at the density functional theory (DFT) and classical levels provide insights into the molecular structure, binding energy, and interfacial behavior of saturate, aromatic, and resin molecules near clay mineral surfaces. Periodic DFT calculations reveal binding geometries and ion pairing mechanisms at mineral surfaces while also providing a basis for validating the classical force field approach. Through classical molecular dynamics simulations, the influence of aqueous cations at the interface and the role of water solvation are examined to better evaluate the dynamical nature of cation-organic complexes and their coadsorption onto the clay surfaces. The extent of adsorption is controlled by the hydrophilic nature and layer charge of the clay mineral. All organic species studied showed preferential adsorption on hydrophobic mineral surfaces. However, the anionic form of the resin (decahydro-2-naphthoic acid), expected to be prevalent at near-neutral pH conditions in petroleum reservoirs, readily adsorbs to the hydrophilic kaolinite surface through a combination of cation pairing and hydrogen bonding with surface hydroxyl groups. Analysis of cation-organic pairing in both the adsorbed and desorbed states reveals a strong preference for organic anions to coordinate with divalent calcium ions rather than monovalent sodium ions, lending support to current theories regarding low-salinity water flooding.

Low-salinity water flooding, a method of enhanced oil recovery, consists of injecting low ionic strength fluids into an oil reservoir in order to detach oil from mineral surfaces in the underlying formation. Although highly successful in practice, the approach is not completely understood at the molecular scale. Molecular dynamics simulations have been used to investigate the effect of surface protonation on the adsorption of an anionic crude oil component on clay mineral edge surfaces. A set of interatomic potentials appropriate for edge simulations has been applied to the kaolinite (010) surface in contact with an aqueous nanopore. Decahydro-2-napthoic acid in its deprotonated form (DHNA-) was used as a representative resin component of crude oil, with monovalent and divalent counterions, to test the observed trends in low-salinity water flooding experiments. Surface models include fully protonated (neutral) and deprotonated (negative) edge sites, which require implementation of a new deprotonation scheme. The surface adsorptive properties of the kaolinite edge under neutral and deprotonated conditions have been investigated for low and high DHNA- concentrations with Na+ and Ca2+ as counterions. The tendency of DHNA- ions to coordinate with divalent (Ca2+) rather than monovalent (Na+) ions greatly influences adsorption tendencies of the anion. Additionally, the formation of net positively charged surface sites due to Ca2+ at deprotonated sites results in increased DHNA- adsorption. Divalent cations such as Ca2+ are able to efficiently bridge surface sites and organic anions. Replacing those cations with monovalent cations such as Na+ diminishes the bridging mechanism, resulting in reduced adsorption of the organic species. A clear trend of decreased DHNA- adsorption is observed in the simulations as Ca2+ is replaced by Na+ for deprotonated surfaces, as would be expected for oil detachment from reservoir formations following a low-salinity flooding event.

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Cubic zirconium tungstate (α-ZrW₂O₈), a notorious negative thermal expansion (NTE) material, has been investigated within the framework of density functional perturbation theory (DFPT), combined with experimental characterization to assess and validate computational results. Spectroscopic, mechanical and thermodynamic properties have been derived from DFPT calculations. A systematic comparison of DFPT-simulated infrared, Raman, and phonon density-of-state spectra with Fourier transform far-/mid-infrared and Raman data collected in this study, as well as with available inelastic neutron scattering measurements, shows the supe-rior accuracy of the PBEsol exchange-correlation functional over standard PBE calculations. The thermal evolution of the Grüneisen parameter computed within the quasi-harmonic approximation exhibits negative values below the Debye temperature, consistent with the observed NTE characteristics of α-ZrW₂O₈. The standard molar heat capacity is predicted to be C$0\atop{P}$=193.8 and 192.2 J.mol^-1.K^-1 with PBE and PBEsol, respectively, ca. 7% lower than calorimetric data. In conclusion, these results demonstrate the accuracy of the DFPT/PBEsol approach for studying the spectroscopic, mechanical and thermodynamic properties of materials with anomalous thermal expansion.

Our team has investigated a series of soluble coordination complexes for use as tags to monitor underground fluid flows in reservoirs. While most of the metal-ligand (M-L) complexes were based on the dianionic salen family of ligands, conceptually other ligands such as porphyrins or phthalocyanines could be used with similar success. Detection and identification of these species in solution were performed by inductively coupled plasma (ICP) or Raman/resonance Raman (rR) spectroscopy. The preparation of a large number of new M-L salen complexes was accomplished. Complexes were prepared that were soluble in either water or hydrocarbons to allow for flexibility in use. Unambiguous identification of these complexes allowed for meaningful molecular dynamics (MD) calculations to be performed, so that the attraction of the M-L complexes to either the rock formation or the liquid media could be evaluated. The use of soluble M-L species was found to avoid issues of rock deposition.

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Molecular scale understanding of the structure and properties of aqueous interfaces with clays, metal (oxy-) hydroxides, layered double hydroxides, and other inorganic phases is strongly affected by significant degrees of structural and compositional disorder of the interfaces. ClayFF was originally developed as a robust and flexible force field for classical molecular simulations of such systems (Cygan, R. T.; Liang, J.-J.; Kalinichev, A. G. J. Phys. Chem. B 2004, 108, 1255-1266). However, despite its success, multiple limitations have also become evident with its use. One of the most important limitations is the difficulty to accurately model the edges of finite size nanoparticles or pores rather than infinitely layered periodic structures. Here we propose a systematic approach to solve this problem by developing specific metal-O-H (M-O-H) bending terms for ClayFF, Ebend = k (θ - θ0)2 to better describe the structure and dynamics of singly protonated hydroxyl groups at mineral surfaces, particularly edge surfaces. On the basis of a series of DFT calculations, the optimal values of the Al-O-H and Mg-O-H parameters for Al and Mg in octahedral coordination are determined to be θ0,AlOH = θ0,MgOH = 110°, kAlOH = 15 kcal mol-1 rad-2 and kMgOH = 6 kcal mol-1 rad-2. Molecular dynamics simulations were performed for fully hydrated models of the basal and edge surfaces of gibbsite, Al(OH)3, and brucite, Mg(OH)2, at the DFT level of theory and at the classical level, using ClayFF with and without the M-O-H term. The addition of the new bending term leads to a much more accurate representation of the orientation of O-H groups at the basal and edge surfaces. The previously observed unrealistic desorption of OH2 groups from the particle edges within the original ClayFF model is also strongly constrained by the new modification.

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