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Biomedical Applications of the Information-efficient Spectral Imaging Sensor (ISIS)

Gentry, S.M.

The Information-efficient Spectral Imaging Sensor (ISIS) approach to spectral imaging seeks to bridge the gap between tuned multispectral and fixed hyperspectral imaging sensors. By allowing the definition of completely general spectral filter functions, truly optimal measurements can be made for a given task. These optimal measurements significantly improve signal-to-noise ratio (SNR) and speed, minimize data volume and data rate, while preserving classification accuracy. The following paper investigates the application of the ISIS sensing approach in two sample biomedical applications: prostate and colon cancer screening. It is shown that in these applications, two to three optimal measurements are sufficient to capture the majority of classification information for critical sample constituents. In the prostate cancer example, the optimal measurements allow 8% relative improvement in classification accuracy of critical cell constituents over a red, green, blue (RGB) sensor. In the colon cancer example, use of optimal measurements boost the classification accuracy of critical cell constituents by 28% relative to the RGB sensor. In both cases, optimal measurements match the performance achieved by the entire hyperspectral data set. The paper concludes that an ISIS style spectral imager can acquire these optimal spectral images directly, allowing improved classification accuracy over an RGB sensor. Compared to a hyperspectral sensor, the ISIS approach can achieve similar classification accuracy using a significantly lower number of spectral samples, thus minimizing overall sample classification time and cost.

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Theoretical Analysis of the Sensitivity and Speed Improvement of ISIS over a Comparable Traditional Hyperspectral Imager

Gentry, S.M.

The analysis presented herein predicts that, under signal-independent noise limited conditions, an Information-efficient Spectral Imaging Sensor (ISIS) style hyperspectral imaging system design can obtain significant signal-to-noise ratio (SNR) and speed increase relative to a comparable traditional hyperspectral imaging (HSI) instrument. Factors of forty are reasonable for a single vector, and factors of eight are reasonable for a five-vector measurement. These advantages can be traded with other system parameters in an overall sensor system design to allow a variety of applications to be done that otherwise would be impossible within the constraints of the traditional HSI style design.

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Detection optimization using linear systems analysis of a coded aperture laser sensor system

Gentry, S.M.

Minimum detectable irradiance levels for a diffraction grating based laser sensor were calculated to be governed by clutter noise resulting from reflected earth albedo. Features on the earth surface caused pseudo-imaging effects on the sensor`s detector arras that resulted in the limiting noise in the detection domain. It was theorized that a custom aperture transmission function existed that would optimize the detection of laser sources against this clutter background. Amplitude and phase aperture functions were investigated. Compared to the diffraction grating technique, a classical Young`s double-slit aperture technique was investigated as a possible optimized solution but was not shown to produce a system that had better clutter-noise limited minimum detectable irradiance. Even though the double-slit concept was not found to have a detection advantage over the slit-grating concept, one interesting concept grew out of the double-slit design that deserved mention in this report, namely the Barker-coded double-slit. This diffractive aperture design possessed properties that significantly improved the wavelength accuracy of the double-slit design. While a concept was not found to beat the slit-grating concept, the methodology used for the analysis and optimization is an example of the application of optoelectronic system-level linear analysis. The techniques outlined here can be used as a template for analysis of a wide range of optoelectronic systems where the entire system, both optical and electronic, contribute to the detection of complex spatial and temporal signals.

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Preliminary DIAL model

Gentry, S.M.

A unique end-to-end LIDAR sensor model has been developed supporting the concept development stage of the CALIOPE UV DIAL and UV laser-induced-fluorescence (LIF) efforts. The model focuses on preserving the temporal and spectral nature of signals as they pass through the atmosphere, are collected by the optics, detected by the sensor, and processed by the sensor electronics and algorithms. This is done by developing accurate component sub-models with realistic inputs and outputs, as well as internal noise sources and operating parameters. These sub-models are then configured using data-flow diagrams to operate together to reflect the performance of the entire DIAL system. This modeling philosophy allows the developer to have a realistic indication of the nature of signals throughout the system and to design components and processing in a realistic environment. Current component models include atmospheric absorption and scattering losses, plume absorption and scattering losses, background, telescope and optical filter models, PMT (photomultiplier tube) with realistic noise sources, amplifier operation and noise, A/D converter operation, noise and distortion, pulse averaging, and DIAL computation. Preliminary results of the model will be presented indicating the expected model operation depicting the October field test at the NTS spill test facility. Indications will be given concerning near-term upgrades to the model.

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4 Results
4 Results