The Kokkos OpenMPTarget Backend: Implementation and Lessons Learned
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Concurrency and Computation: Practice and Experience
Astra, deployed in 2018, was the first petascale supercomputer to utilize processors based on the ARM instruction set. The system was also the first under Sandia's Vanguard program which seeks to provide an evaluation vehicle for novel technologies that with refinement could be utilized in demanding, large-scale HPC environments. In addition to ARM, several other important first-of-a-kind developments were used in the machine, including new approaches to cooling the datacenter and machine. This article documents our experiences building a power measurement and control infrastructure for Astra. While this is often beyond the control of users today, the accurate measurement, cataloging, and evaluation of power, as our experiences show, is critical to the successful deployment of a large-scale platform. While such systems exist in part for other architectures, Astra required new development to support the novel Marvell ThunderX2 processor used in compute nodes. In addition to documenting the measurement of power during system bring up and for subsequent on-going routine use, we present results associated with controlling the power usage of the processor, an area which is becoming of progressively greater interest as data centers and supercomputing sites look to improve compute/energy efficiency and find additional sources for full system optimization.
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Proceedings - 2022 IEEE 36th International Parallel and Distributed Processing Symposium Workshops, IPDPSW 2022
Centered on modern C++ and the SYCL standard for heterogeneous programming, Data Parallel C++ (dpc++) and Intel's oneAPI software ecosystem aim to lower the barrier to entry for the use of accelerators like FPGAs in diverse applications. In this work, we consider the usage of FPGAs for scientific computing, in particular with a multigrid solver, MueLu. We report on early experiences implementing kernels of the solver in DPC++ for execution on Stratix 10 FPGAs, and we evaluate several algorithmic design and implementation choices. These choices not only impact performance, but also shed light on the capabilities and limitations of DPC++ and oneAPI.
Proceedings - 2022 IEEE 36th International Parallel and Distributed Processing Symposium Workshops, IPDPSW 2022
Centered on modern C++ and the SYCL standard for heterogeneous programming, Data Parallel C++ (dpc++) and Intel's oneAPI software ecosystem aim to lower the barrier to entry for the use of accelerators like FPGAs in diverse applications. In this work, we consider the usage of FPGAs for scientific computing, in particular with a multigrid solver, MueLu. We report on early experiences implementing kernels of the solver in DPC++ for execution on Stratix 10 FPGAs, and we evaluate several algorithmic design and implementation choices. These choices not only impact performance, but also shed light on the capabilities and limitations of DPC++ and oneAPI.
Lecture Notes in Computer Science Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics
OpenMP 5.0 added support for reductions over explicit tasks. This expands the previous reduction support that was limited primarily to worksharing and parallel constructs. While the scope of a reduction operation in a worksharing construct is the scope of the construct itself, the scope of a task reduction can vary. This difference requires syntactical means to define the scope of reductions, e.g., the task_reduction clause, and to associate participating tasks, e.g., the in_reduction clause. Furthermore, the disassociation of the number of threads and the number of tasks creates space for different implementations in the OpenMP runtime. In this work, we provide insights into the behavior and performance of task reduction implementations in GCC/g++ and LLVM/Clang. Our results indicate that task reductions are well supported by both compilers, but their performance differs in some cases and is often determined by the efficiency of the underlying task management.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
OpenMP 5.0 added support for reductions over explicit tasks. This expands the previous reduction support that was limited primarily to worksharing and parallel constructs. While the scope of a reduction operation in a worksharing construct is the scope of the construct itself, the scope of a task reduction can vary. This difference requires syntactical means to define the scope of reductions, e.g., the task_reduction clause, and to associate participating tasks, e.g., the in_reduction clause. Furthermore, the disassociation of the number of threads and the number of tasks creates space for different implementations in the OpenMP runtime. In this work, we provide insights into the behavior and performance of task reduction implementations in GCC/g++ and LLVM/Clang. Our results indicate that task reductions are well supported by both compilers, but their performance differs in some cases and is often determined by the efficiency of the underlying task management.
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Scientific applications run on high-performance computing (HPC) systems are critical for many national security missions within Sandia and the NNSA complex. However, these applications often face performance degradation and even failures that are challenging to diagnose. To provide unprecedented insight into these issues, the HPC Development, HPC Systems, Computational Science, and Plasma Theory & Simulation departments at Sandia crafted and completed their FY21 ASC Level 2 milestone entitled "Integrated System and Application Continuous Performance Monitoring and Analysis Capability." The milestone created a novel integrated HPC system and application monitoring and analysis capability by extending Sandia's Kokkos application portability framework, Lightweight Distributed Metric Service (LDMS) monitoring tool, and scalable storage, analysis, and visualization pipeline. The extensions to Kokkos and LDMS enable collection and storage of application data during run time, as it is generated, with negligible overhead. This data is combined with HPC system data within the extended analysis pipeline to present relevant visualizations of derived system and application metrics that can be viewed at run time or post run. This new capability was evaluated using several week-long, 290-node runs of Sandia's ElectroMagnetic Plasma In Realistic Environments ( EMPIRE ) modeling and design tool and resulted in 1TB of application data and 50TB of system data. EMPIRE developers remarked this capability was incredibly helpful for quickly assessing application health and performance alongside system state. In short, this milestone work built the foundation for expansive HPC system and application data collection, storage, analysis, visualization, and feedback framework that will increase total scientific output of Sandia's HPC users.
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Communications in Computer and Information Science
Several recent workshops conducted by the DOE Advanced Scientific Computing Research program have established the fact that the complexity of developing applications and executing them on high-performance computing (HPC) systems is rising at a rate which will make it nearly impossible to continue to achieve higher levels of performance and scalability. Absent an alternative approach to managing this ever-growing complexity, HPC systems will become increasingly difficult to use. A more holistic approach to designing and developing applications and managing system resources is required. This paper outlines a research strategy for managing the increasing the complexity by providing the programming environment, software stack, and hardware capabilities needed for autonomous resource management of HPC systems. Developing portable applications for a variety of HPC systems of varying scale requires a paradigm shift from the current approach, where applications are painstakingly mapped to individual machine resources, to an approach where machine resources are automatically mapped and optimized to applications as they execute. Achieving such automated resource management for HPC systems is a daunting challenge that requires significant sustained investment in exploring new approaches and novel capabilities in software and hardware that span the spectrum from programming systems to device-level mechanisms. This paper provides an overview of the functionality needed to enable autonomous resource management and optimization and describes the components currently being explored at Sandia National Laboratories to help support this capability.
2021 IEEE High Performance Extreme Computing Conference, HPEC 2021
Both the data science and scientific computing communities are embracing GPU acceleration for their most demanding workloads. For scientific computing applications, the massive volume of code and diversity of hardware platforms at supercomputing centers has motivated a strong effort toward performance portability. This property of a program, denoting its ability to perform well on multiple architectures and varied datasets, is heavily dependent on the choice of parallel programming model and which features of the programming model are used. In this paper, we evaluate performance portability in the context of a data science workload in contrast to a scientific computing workload, evaluating the same sparse matrix kernel on both. Among our implementations of the kernel in different performance-portable programming models, we find that many struggle to consistently achieve performance improvements using the GPU compared to simple one-line OpenMP parallelization on high-end multicore CPUs. We show one that does, and its performance approaches and sometimes even matches that of vendor-provided GPU math libraries.
2021 IEEE High Performance Extreme Computing Conference Hpec 2021
Both the data science and scientific computing communities are embracing GPU acceleration for their most demanding workloads. For scientific computing applications, the massive volume of code and diversity of hardware platforms at supercomputing centers has motivated a strong effort toward performance portability. This property of a program, denoting its ability to perform well on multiple architectures and varied datasets, is heavily dependent on the choice of parallel programming model and which features of the programming model are used. In this paper, we evaluate performance portability in the context of a data science workload in contrast to a scientific computing workload, evaluating the same sparse matrix kernel on both. Among our implementations of the kernel in different performance-portable programming models, we find that many struggle to consistently achieve performance improvements using the GPU compared to simple one-line OpenMP parallelization on high-end multicore CPUs. We show one that does, and its performance approaches and sometimes even matches that of vendor-provided GPU math libraries.
Proceedings of ExaMPI 2020: Exascale MPI Workshop, Held in conjunction with SC 2020: The International Conference for High Performance Computing, Networking, Storage and Analysis
Multithreaded MPI applications are gaining popularity in scientific and high-performance computing. While the combination of programming models is suited to support current parallel hardware, it moves threading models and their interaction with MPI into focus. With the advent of new threading libraries, the flexibility to select threading implementations of choice is becoming an important usability feature. Open MPI has traditionally avoided componentizing its threading model, relying on code inlining and static initialization to minimize potential impacts on runtime fast paths and synchronization. This paper describes the implementation of a generic threading runtime support in Open MPI using the Opal Modular Component Architecture. This architecture allows the programmer to select a threading library at compile-or run-time, providing both static initialization of threading primitives as well as dynamic instantiation of threading objects. In this work, we present the implementation, define required interfaces, and discuss trade-offs of dynamic and static initialization.
Proceedings of MCHPC 2020: Workshop on Memory Centric High Performance Computing, Held in conjunction with SC 2020: The International Conference for High Performance Computing, Networking, Storage and Analysis
Many-core systems are beginning to feature novel large, high-bandwidth intermediate memory as a visible part of the memory hierarchy. This paper discusses how to make use of intermediate memory when composing matrix multiply with transpose to compute $A$ * AT. We re-purpose the cache-oblivious approach developed by Frigo et al. and apply it to the composition of a bandwidth-bound kernel (transpose) with a compute-bound kernel (matrix multiply). Particular focus is on regions of matrix shapes far from square that are not usually considered. Our codes are simpler than optimized codes, but reasonably close in performance. Also, perhaps of more importance is developing a paradigm for how to construct other codes using intermediate memories.
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Proceedings - 2020 IEEE 34th International Parallel and Distributed Processing Symposium Workshops, IPDPSW 2020
A broad set of data science and engineering questions may be organized as graphs, providing a powerful means for describing relational data. Although experts now routinely compute graph algorithms on huge, unstructured graphs using high performance computing (HPC) or cloud resources, this practice hasn't yet broken into the mainstream. Such computations require great expertise, yet users often need rapid prototyping and development to quickly customize existing code. Toward that end, we are exploring the use of the Chapel programming language as a means of making some important graph analytics more accessible, examining the breadth of characteristics that would make for a productive programming environment, one that is expressive, performant, portable, and robust.
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Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
In the decade since support for task parallelism was incorporated into OpenMP, its use has remained limited in part due to concerns about its performance and scalability. This paper revisits a study from the early days of OpenMP tasking that used the Unbalanced Tree Search (UTS) benchmark as a stress test to gauge implementation efficiency. The present UTS study includes both Clang/LLVM and vendor OpenMP implementations on four different architectures. We measure parallel efficiency to examine each implementation’s performance in response to varying task granularity. We find that most implementations achieve over 90% efficiency using all available cores for tasks of O(100k) instructions, and the best even manage tasks of O(10k) instructions well.
International Conference for High Performance Computing, Networking, Storage and Analysis, SC
Community detection in graphs is a canonical social network analysis method. We consider the problem of generating suites of teras-cale synthetic social networks to compare the solution quality of parallel community-detection methods. The standard method, based on the graph generator of Lancichinetti, Fortunato, and Radicchi (LFR), has been used extensively for modest-scale graphs, but has inherent scalability limitations. We provide an alternative, based on the scalable Block Two-Level Erdos-Renyi (BTER) graph generator, that enables HPC-scale evaluation of solution quality in the style of LFR. Our approach varies community coherence, and retains other important properties. Our methods can scale real-world networks, e.g., to create a version of the Friendster network that is 512 times larger. With BTER's inherent scalability, we can generate a 15-terabyte graph (4.6B vertices, 925B edges) in just over one minute. We demonstrate our capability by showing that label-propagation community-detection algorithm can be strong-scaled with negligible solution-quality loss.
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In this report, we abstract eleven papers published during the project and describe preliminary unpublished results that warrant follow-up work. The topic is multi-level memory algorithmics, or how to effectively use multiple layers of main memory. Modern compute nodes all have this feature in some form.
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Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
For at least the last 20 years, many have tried to create a general resource management system to support interoperability across various concurrent libraries. The previous strategies all suffered from additional toolchain requirements, and/or a usage of a shared programing model that assumed it owned/controlled access to all resources available to the program. None of these techniques have achieved wide spread adoption. The ubiquity of OpenMP coupled with C++ developing a standard way to describe many different concurrent paradigms (C++23 executors) would allow OpenMP to assume the role of a general resource manager without requiring user code written directly in OpenMP. With a few added features such as the ability to use otherwise idle threads to execute tasks and to specify a task “width”, many interesting concurrent frameworks could be developed in native OpenMP and achieve high performance. Further, one could create concrete C++ OpenMP executors that enable support for general C++ executor based codes, which would allow Fortran, C, and C++ codes to use the same underlying concurrent framework when expressed as native OpenMP or using language specific features. Effectively, OpenMP would become the de facto solution for a problem that has long plagued the HPC community.
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Proceedings of the IEEE
This paper presents an overview of the past, present and future of the OpenMP application programming interface (API). While the API originally specified a small set of directives that guided shared memory fork-join parallelization of loops and program sections, OpenMP now provides a richer set of directives that capture a wide range of parallelization strategies that are not strictly limited to shared memory. As we look toward the future of OpenMP, we immediately see further evolution of the support for that range of parallelization strategies and the addition of direct support for debugging and performance analysis tools. Looking beyond the next major release of the specification of the OpenMP API, we expect the specification eventually to include support for more parallelization strategies and to embrace closer integration into its Fortran, C and, in particular, C++ base languages, which will likely require the API to adopt additional programming abstractions.
The Vanguard program informally began in January 2017 with the submission of a white paper entitled "Sandia's Vision for a 2019 Arm Testbed" to NNSA headquarters. The program proceeded in earnest in May 2017 with an announcement by Doug Wade (Director, Office of Advanced Simulation and Computing and Institutional R&D at NNSA) that Sandia National Laboratories (Sandia) would host the first Advanced Architecture Prototype platform based on the Arm architecture. In August 2017, Sandia formed a Tri-lab team chartered to develop a robust HPC software stack for Astra to support the Vanguard program goal of demonstrating the viability of Arm in supporting ASC production computing workloads. This document describes the high-level Vanguard program goals, the Vanguard-Astra project acquisition plan and procurement up to contract placement, the initial software stack environment planned for the Vanguard-Astra platform (Astra), a description of how the communities of users will utilize the platform during the transition from the open network to the classified network, and initial performance results.
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The Vanguard program informally began in January 2017 with the submission of a white paper entitled "Sandia's Vision for a 2019 Arm Testbed" to NNSA headquarters. The program proceeded in earnest in May 2017 with an announcement by Doug Wade (Director, Office of Advanced Simulation and Computing and Institutional R&D at NNSA) that Sandia National Laboratories (Sandia) would host the first Advanced Architecture Prototype platform based on the Arm architecture. In August 2017, Sandia formed a Tri-lab team chartered to develop a robust HPC software stack for Astra to support the Vanguard program goal of demonstrating the viability of Arm in supporting ASC production computing workloads.
Proceedings - 2018 IEEE 32nd International Parallel and Distributed Processing Symposium Workshops, IPDPSW 2018
Large-scale HPC systems increasingly incorporate sophisticated power management control mechanisms. While these mechanisms are potentially useful for performing energy and/or power-aware job scheduling and resource management (EPA JSRM), greater understanding of their operation and performance impact on real-world applications is required before they can be applied effectively in practice. In this paper, we compare static p-state control to static node-level power cap control on a Cray XC system. Empirical experiments are performed to evaluate node-to-node performance and power usage variability for the two mechanisms. We find that static p-state control produces more predictable and higher performance characteristics than static node-level power cap control at a given power level. However, this performance benefit is at the cost of less predictable power usage. Static node-level power cap control produces predictable power usage but with more variable performance characteristics. Our results are not intended to show that one mechanism is better than the other. Rather, our results demonstrate that the mechanisms are complementary to one another and highlight their potential for combined use in achieving effective EPA JSRM solutions.
Proceedings 2018 IEEE 32nd International Parallel and Distributed Processing Symposium Workshops Ipdpsw 2018
Large-scale HPC systems increasingly incorporate sophisticated power management control mechanisms. While these mechanisms are potentially useful for performing energy and/or power-aware job scheduling and resource management (EPA JSRM), greater understanding of their operation and performance impact on real-world applications is required before they can be applied effectively in practice. In this paper, we compare static p-state control to static node-level power cap control on a Cray XC system. Empirical experiments are performed to evaluate node-to-node performance and power usage variability for the two mechanisms. We find that static p-state control produces more predictable and higher performance characteristics than static node-level power cap control at a given power level. However, this performance benefit is at the cost of less predictable power usage. Static node-level power cap control produces predictable power usage but with more variable performance characteristics. Our results are not intended to show that one mechanism is better than the other. Rather, our results demonstrate that the mechanisms are complementary to one another and highlight their potential for combined use in achieving effective EPA JSRM solutions.
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Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
In modern shared-memory NUMA systems which typically consist of two or more multi-core processor packages with local memory, affinity of data to computation is crucial for achieving high performance with an OpenMP program. OpenMP* 3.0 introduced support for task-parallel programs in 2008 and has continued to extend its applicability and expressiveness. However, the ability to support data affinity of tasks is missing. In this paper, we investigate several approaches for task-to-data affinity that combine locality-aware task distribution and task stealing. We introduce the task affinity clause that will be part of OpenMP 5.0 and provide the reasoning behind its design. Evaluation with our experimental implementation in the LLVM OpenMP runtime shows that task affinity improves execution performance up to 4.5x on an 8-socket NUMA machine and significantly reduces runtime variability of OpenMP tasks. Our results demonstrate that a variety of applications can benefit from task affinity and that the presented clause is closing the gap of task-to-data affinity in OpenMP 5.0.
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Proceedings of LLVM-HPC 2017: 4th Workshop on the LLVM Compiler Infrastructure in HPC - Held in conjunction with SC 2017: The International Conference for High Performance Computing, Networking, Storage and Analysis
Optimizing compilers for task-level parallelism are still in their infancy. This work explores a compiler front end that translates OpenMP tasking semantics to Tapir, an extension to LLVM IR that represents fork-join parallelism. This enables analyses and optimizations that were previously inaccessible to OpenMP codes, as well as the ability to target additional runtimes at code generation. Using a Cilk runtime back end, we compare results to existing OpenMP implementations. Initial performance results for the Barcelona OpenMP task suite show performance improvements over existing implementations.
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This report is an outcome of the ASC ATDM Level 2 Milestone 6015: Asynchronous Many-Task Software Stack Demonstration. It comprises a summary and in depth analysis of DARMA and a DARMA-compliant Asynchronous Many-Task (AMT) runtime software stack. Herein performance and productivity of the over- all approach are assessed on benchmarks and proxy applications representative of the Sandia ATDM applications. As part of the effort to assess the perceived strengths and weaknesses of AMT models compared to more traditional methods, experiments were performed on ATS-1 (Advanced Technology Systems) test bed machines and Trinity. In addition to productivity and performance assessments, this report includes findings on the generality of DARMAs backend API as well as findings on interoperability with node- level and network-level system libraries. Together, this information provides a clear understanding of the strengths and limitations of the DARMA approach in the context of Sandias ATDM codes, to guide our future research and development in this area.
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Proceedings - 2017 IEEE 31st International Parallel and Distributed Processing Symposium, IPDPS 2017
Energy efficiency in high performance computing (HPC) will be critical to limit operating costs and carbon footprints in future supercomputing centers. Energy efficiency of a computation can be improved by reducing time to completion without a substantial increase in power drawn or by reducing power with a little increase in time to completion. We present an Adaptive Core-specific Runtime (ACR) that dynamically adapts core frequencies to workload characteristics, and show examples of both reductions in power and improvement in the average performance. This improvement in energy efficiency is obtained without changes to the application. The adaptation policy embedded in the runtime uses existing core-specific power controls like software-controlled clock modulation and per-core Dynamic Voltage Frequency Scaling (DVFS) introduced in Intel Haswell. Experiments on six standard MPI benchmarks and a real world application show an overall 20% improvement in energy efficiency with less than 1% increase in execution time on 32 nodes (1024 cores) using per-core DVFS. An improvement in energy efficiency of up to 42% is obtained with the real world application ParaDis through a combination of speedup and power reduction. For one configuration, ParaDis achieves an average speedup of 11%, while the power is lowered by about 31%. The average improvement in the performance seen is a direct result of the reduction in run-to-run variation and running at turbo frequencies.
Proceedings of the 7th International Workshop on Runtime and Operating Systems for Supercomputers, ROSS 2017 - In conjunction with HPDC
This paper describes improvements in task scheduling for the Chapel parallel programming language provided in its default on-node tasking runtime, the Qthreads library. We describe a new scheduler distrib which builds on the approaches of two previous Qthreads schedulers, Sherwood and Nemesis, and combines the best aspects of both-work stealing and load balancing from Sherwood and a lock free queue access from Nemesis- to make task queuing better suited for the use of Chapel in the manycore era. We demonstrate the efficacy of this new scheduler by showing improvements in various individual benchmarks of the Chapel test suite on the Intel Knights Landing architecture.
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Measuring and controlling the power and energy consumption of high performance computing systems by various components in the software stack is an active research area. Implementations in lower level software layers are beginning to emerge in some production systems, which is very welcome. To be most effective, a portable interface to measurement and control features would significantly facilitate participation by all levels of the software stack. We present a proposal for a standard power Application Programming Interface (API) that endeavors to cover the entire software space, from generic hardware interfaces to the input from the computer facility manager.
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Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Emerging novel architectures for shared memory parallel computing are incorporating increasingly creative innovations to deliver higher memory performance. A notable exemplar of this phenomenon is the Multi-Channel DRAM (MCDRAM) that is included in the Intel® XeonPhi™ processors. In this paper, we examine techniques to use OpenMP to exploit the high bandwidth of MCDRAM by staging data. In particular, we implement double buffering using OpenMP sections and tasks to explicitly manage movement of data into MCDRAM. We compare our double-buffered approach to a non-buffered implementation and to Intel’s cache mode, in which the system manages the MCDRAM as a transparent cache. We also demonstrate the sensitivity of performance to parameters such as dataset size and the distribution of threads between compute and copy operations.
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Measuring and controlling the power and energy consumption of high performance computing systems by various components in the software stack is an active research area [13, 3, 5, 10, 4, 21, 19, 16, 7, 17, 20, 18, 11, 1, 6, 14, 12]. Implementations in lower level software layers are beginning to emerge in some production systems, which is very welcome. To be most effective, a portable interface to measurement and control features would significantly facilitate participation by all levels of the software stack. We present a proposal for a standard power Application Programming Interface (API) that endeavors to cover the entire software space, from generic hardware interfaces to the input from the computer facility manager.
Computer
Power API - the result of collaboration among national laboratories, universities, and major vendors - provides a range of standardized power management functions, from application-level control and measurement to facility-level accounting, including real-time and historical statistics gathering. Support is already available for Intel and AMD CPUs and standalone measurement devices.
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This report describes a new capability for hierarchical task-data parallelism using Sandia's Kokkos and Qthreads, and evaluation of this capability with sparse matrix Cholesky factorization and social network triangle enumeration mini-applications. Hierarchical task-data parallelism consists of a collection of tasks with executes-after dependences where each task contains data parallel operations performed on a team of hardware threads. The collection of tasks and dependences form a directed acyclic graph of tasks - a task DAG. Major challenges of this research and development effort include: portability and performance across multicore CPU; manycore Intel Xeon Phi, and NVIDIA GPU architectures; scalability with respect to hardware concurrency and size of the task DAG; and usability of the application programmer interface (API).
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This report outlines the software requirements for on-node resource management in the Advanced Simulation and Computing (ASC) Advanced Technology Development and Mitigation (ATDM) project at Sandia National Laboratories (SNL). The need for on-node resource management has arisen from the componentization of the software stack. Componentization aids in managing complexity and making software more composable and reusable. However, components must compete for limited on-node resources for execution (e.g., cores and hardware threads) and memory. The requirements documented in this report support an effort to manage this contention, avoiding oversubscription of resources and enabling their efficient deployment for application execution.
Measuring and controlling the power and energy consumption of high performance computing systems by various components in the software stack is an active research area [13, 3, 5, 10, 4, 21, 19, 16, 7, 17, 20, 18, 11, 1, 6, 14, 12]. Implementations in lower level software layers are beginning to emerge in some production systems, which is very welcome. To be most effective, a portable interface to measurement and control features would significantly facilitate participation by all levels of the software stack. We present a proposal for a standard power Application Programming Interface (API) that endeavors to cover the entire software space, from generic hardware interfaces to the input from the computer facility manager.
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Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
OpenMP tasking supports parallelization of irregular algorithms. Recent OpenMP specifications extended tasking to increase functionality and to support optimizations, for instance with the taskloop construct. However, task scheduling remains opaque, which leads to inconsistent performance on NUMA architectures. We assess design issues for task affinity and explore several approaches to enable it. We evaluate these proposals with implementations in the Nanos++ and LLVM OpenMP runtimes that improve performance up to 40% and significantly reduce execution time variation.
We introduce a task-parallel algorithm for sparse incomplete Cholesky factorization that utilizes a 2D sparse partitioned-block layout of a matrix. Our factorization algorithm follows the idea of algorithms-by-blocks by using the block layout. The algorithm-byblocks approach induces a task graph for the factorization. These tasks are inter-related to each other through their data dependences in the factorization algorithm. To process the tasks on various manycore architectures in a portable manner, we also present a portable tasking API that incorporates different tasking backends and device-specific features using an open-source framework for manycore platforms i.e., Kokkos. A performance evaluation is presented on both Intel Sandybridge and Xeon Phi platforms for matrices from the University of Florida sparse matrix collection to illustrate merits of the proposed task-based factorization. Experimental results demonstrate that our task-parallel implementation delivers about 26.6x speedup (geometric mean) over single-threaded incomplete Choleskyby- blocks and 19.2x speedup over serial Cholesky performance which does not carry tasking overhead using 56 threads on the Intel Xeon Phi processor for sparse matrices arising from various application problems.
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Proceedings of E2SC 2015: 3rd International Workshop on Energy Efficient Supercomputing - Held in conjunction with SC 2015: The International Conference for High Performance Computing, Networking, Storage and Analysis
Power consumption of extreme-scale supercomputers has become a key performance bottleneck. Yet current practices do not leverage power management opportunities, instead running at maximum power. This is not sustainable. Future systems will need to manage power as a critical resource, directing it to where it has greatest benefit. Power capping is one mechanism for managing power budgets, however its behavior is not well understood. This paper presents an empirical evaluation of several key HPC workloads running under a power cap on a Cray XC40 system, and provides a comparison of this technique with p-state control, demonstrating the performance differences of each. These results show: 1.) Maximum performance requires ensuring the cap is not reached; 2.) Performance slowdown under a cap can be attributed to cascading delays which result in unsynchronized performance variability across nodes; and, 3.) Due to lag in reaction time, considerable time is spent operating above the set cap. This work provides a timely and much needed comparison of HPC application performance under a power cap and attempts to enable users and system administrators to understand how to best optimize application performance on power-constrained HPC systems.
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Achieving practical exascale supercomputing will require massive increases in energy efficiency. The bulk of this improvement will likely be derived from hardware advances such as improved semiconductor device technologies and tighter integration, hopefully resulting in more energy efficient computer architectures. Still, software will have an important role to play. With every generation of new hardware, more power measurement and control capabilities are exposed. Many of these features require software involvement to maximize feature benefits. This trend will allow algorithm designers to add power and energy efficiency to their optimization criteria. Similarly, at the system level, opportunities now exist for energy-aware scheduling to meet external utility constraints such as time of day cost charging and power ramp rate limitations. Finally, future architectures might not be able to operate all components at full capability for a range of reasons including temperature considerations or power delivery limitations. Software will need to make appropriate choices about how to allocate the available power budget given many, sometimes conflicting considerations.
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Measuring and controlling the power and energy consumption of high performance computing systems by various components in the software stack is an active research area [13, 3, 5, 10, 4, 21, 19, 16, 7, 17, 20, 18, 11, 1, 6, 14, 12]. Implementations in lower level software layers are beginning to emerge in some production systems, which is very welcome. To be most effective, a portable interface to measurement and control features would significantly facilitate participation by all levels of the software stack. We present a proposal for a standard power Application Programming Interface (API) that endeavors to cover the entire software space, from generic hardware interfaces to the input from the computer facility manager.
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