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Gas-Phase Oxidation Mechanisms of Nitrogen-Containing Organic Compounds

Johansen, Sommer L.; Au, Kendrew; Zador, Judit; Sheps, Leonid; Marti Aliod, Carles; Golin Almeida, Thomas

Nitrogen-containing organic molecules play essential roles in nearly every aspect of chemistry. The importance of these species within gas-phase chemistry has increased in recent years, due to their emissions from wildfires, crude biofuels, ammonia combustion, and CO2 capture facilities. However, there is a lack of detailed relevant mechanistic and kinetic studies of N-compounds, resulting in poor representation of these pathways within chemical models. In this report, we detail our exploration of the gas-phase oxidation mechanisms of pyrrole, imidazole, pyrrolidine, methylamine, and dimethylamine, done by employing multiplexed VUV photoionization mass spectrometry coupled with KinBot, a computational tool that automatically explores multi-well potential energy surfaces. Overall, we vastly expanded the known gas-phase oxidation mechanisms and chemical kinetics of these species. This work will improve the accuracy and completeness of atmospheric and combustion chemistry models, ultimately leading to better-informed decision-makers in the energy and environmental sectors.

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Automated Reaction Kinetics of Gas-Phase Organic Species over Multiwell Potential Energy Surfaces

Journal of Physical Chemistry A

Zador, Judit; Aliod, Carles M.; Van De Vijver, Ruben; Johansen, Sommer L.; Yang, Yoona; Michelsen, Hope A.; Najm, Habib N.

Automation of rate-coefficient calculations for gas-phase organic species became possible in recent years and has transformed how we explore these complicated systems computationally. Kinetics workflow tools bring rigor and speed and eliminate a large fraction of manual labor and related error sources. In this paper we give an overview of this quickly evolving field and illustrate, through five detailed examples, the capabilities of our own automated tool, KinBot. We bring examples from combustion and atmospheric chemistry of C-, H-, O-, and N-atom-containing species that are relevant to molecular weight growth and autoxidation processes. The examples shed light on the capabilities of automation and also highlight particular challenges associated with the various chemical systems that need to be addressed in future work.

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