Publications

Pawlowski, R. (2011). Graph-based software design for managing complexity and enabling concurrency in multiphysics PDE software. Transactions on Mathematical Software. https://www.osti.gov/biblio/1109428

Bernard, M., Dubicka, I., McClain, J.T., Taylor, S.E., Verzi, S.J., Vineyard, C.M., & Vineyard, C.M. (2011). A Neurophysiologically Inspired Hippocampus Based Associative-ARTMAP Artificial Neural Network Architecture [Conference]. https://www.osti.gov/biblio/1109437

Schoenwald, D.A., Richardson, B., Riehm, A.C., Wolfenbarger, P., Adams, B.M., Reno, M.J., Hansen, C., Oldfield, R., Stamp, J.E., Stein, J.S., Hoekstra, R.J., Nelson, J., Munoz-Ramos, K., McLendon, W., Russo, T.V., Phillips, L.R., & Phillips, L.R. (2011). Final report for %22High performance computing for advanced national electric power grid modeling and integration of solar generation resources%22, LDRD Project No. 149016. https://doi.org/10.2172/1011206

Doerfler, D.W., Rajan, M., & Rajan, M. (2011). Capability vs Capacity; HPC Systems Application Performance Comparisons: Cielo vs. Red Sky [Presentation]. https://www.osti.gov/biblio/1671696

Parks, M.L. (2011). Computational Peridynamics [Presentation]. https://www.osti.gov/biblio/1671701

Rider, W., Kamm, J., Weirs, G., & Weirs, G. (2011). The Role of Theory in Calculation Verification [Conference]. https://www.osti.gov/biblio/1120909

Tuminaro, R.S., Phipps, E.T., & Phipps, E.T. (2011). ASSESSMENT OF COLLOCATION AND GALERKIN APPROACHES TO PARTIAL DIFFERENTIAL EQUATIONS WITH RANDOM DATA. International Journal of Uncertainty Quantification, 1(1). https://doi.org/10.1615/Int.J.UncertaintyQuantification.v1.i1.20

Martinez, M., Bishop, J.E., Notz, P.K., Turner, D.Z., & Turner, D.Z. (2011). Coupled Flow and Mechanics in Porous and Fractured Media [Conference]. https://www.osti.gov/biblio/1109307

Moreland, K. (2011). ASCR Exascale Research Kickoff Slides [Presentation]. https://www.osti.gov/biblio/1671649

Ebeida, M., Knupp, P., Mitchell, S.A., Leung, V.J., & Leung, V.J. (2011). Conforming Voronoi Meshing for three dimensional domains with multiple cracks [Conference]. https://www.osti.gov/biblio/1120637

Ebeida, M., Knupp, P., Leung, V.J., & Leung, V.J. (2011). Mesh Generation of Modeling and Simulation of Carbon Sequestration Processes [Conference]. https://www.osti.gov/biblio/1109334

Schiek, R.L., Warrender, C., & Warrender, C. (2011). Parallel design simulation for neurologically inspired systems [Conference]. https://www.osti.gov/biblio/1140902

Vaughan, C.T., Rajan, M., Barrett, R.F., Doerfler, D.W., Pedretti, K., & Pedretti, K. (2011). Copy of Investigating the Impact of the Cielo Cray XE6 Architecture on Scientific Application Codes [Conference]. https://www.osti.gov/biblio/1140929

Swiler, L.P., Hough, P.D., & Hough, P.D. (2011). Evaluation of Mixed Continuous-Discrete Surrogate Approaches [Conference]. https://www.osti.gov/biblio/1120662

Heroux, M.A. (2011). Building the next generation of scalable manycore applications and libraries [Conference]. https://www.osti.gov/biblio/1109324

Robinson, A.C. (2011). Investigations into the Boris approach for dealing with fast magnetosonic wave speeds in an ALE MHD modeling context [Conference]. https://www.osti.gov/biblio/1109227

Heroux, M.A. (2011). Miniapplications: Vehicles for Co-design [Conference]. https://www.osti.gov/biblio/1109201

Littlewood, D.J. (2011). A Nonlocal Approach to Modeling Crack Nucleation in AA 7075-T651 [Conference]. https://www.osti.gov/biblio/1109187

Boman, E.G., Rajamanickam, S., Heroux, M.A., & Heroux, M.A. (2011). A Hybrid Parallel Sparse Solver [Conference]. https://www.osti.gov/biblio/1109228

Verzi, S.J., Rohrer, B.R., Xavier, P.G., Rothganger, F., & Rothganger, F. (2011). Neurons to Algorithms [Presentation]. https://www.osti.gov/biblio/1671628

Taylor, M.A. (2011). Rotated versions of the Jablonowski steady-state and baroclinic wave test cases: A dynamical core intercomparison. J. Adv. Model. Earth Syst.. https://www.osti.gov/biblio/1109212

Salinger, A.G., Owen, S.J., Pawlowski, R., Phipps, E.T., Siefert, C., Staten, M., & Staten, M. (2011). Building a PDE with Componenets including shape optimization and embedded UQ [Conference]. https://www.osti.gov/biblio/1109209

Taylor, M.A. (2011). Intermittency and Thermalization in Turbulence. Chinese Physics Letters. https://www.osti.gov/biblio/1109219

Taylor, M.A. (2011). A compatible and conservative spectral finite element method on unstructured grids. J. Comput. Phys.. https://www.osti.gov/biblio/1109192

Taylor, M.A. (2011). Accuracy analysis of a spectral element atmospheric model using a fully implicit solution framework. Mon. Weather Review. https://www.osti.gov/biblio/1109230

Barnette, D.W. (2011). Pylot / Co-Pylot / eCo-Pylot: Software for Collecting Storing and Analyzing Supercomputer Performance Data into Databases [Presentation]. https://www.osti.gov/biblio/1671654

Barnette, D.W., Heroux, M.A., & Heroux, M.A. (2011). Supercomputer and Cluster Application Performance Analysis using Python and MySQL [Conference]. https://www.osti.gov/biblio/1120644

Ridzal, D. (2011). Optimization-Based Remap [Conference]. https://www.osti.gov/biblio/1109226

Tuminaro, R.S., Gaidamour, J., Gerstenberger, A., Siefert, C., & Siefert, C. (2011). Krylov Methods and Energy Minimization Algebraic Multigrid [Conference]. https://www.osti.gov/biblio/1109204

Taylor, M.A. (2011). Subcycled dynamics in the spectral Community Atmosphere Model version 4. J. Phys. Comf. Ser.. https://www.osti.gov/biblio/1109207

Taylor, M.A. (2011). Performance of the HOMME dynamical core in the aqua-planet configuration of NCAR CAM4: equatorial waves. Ann. Geophys. https://www.osti.gov/biblio/1109213

Taylor, M.A. (2011). Evaluation of the HOMME Dynamical Core in the Aqua-Planet Configuration of NCAR CAM4: Rainfall. J. Climate. https://www.osti.gov/biblio/1109200

Taylor, M.A. (2011). Low Rossby limiting dynamics for stably stratified flow with finite Froude number. J. Fluid Mech.. https://www.osti.gov/biblio/1109196

Taylor, M.A. (2011). Progress towards accelerating HOMME on hybrid multi-core systems. Int. J. High Performance Computing and applications.. https://www.osti.gov/biblio/1109225

Taylor, M.A., Guba, O., & Guba, O. (2011). CAM-SE: A scalable spectral element dynamical core for the Community Atmosphere Model. Int. J. High Performance Computing and applications.. https://www.osti.gov/biblio/1109185

Adams, S.S., Trumbo, M.C.S., Hendrickson, S.M., Abbott, R.G., Haass, M.J., & Haass, M.J. (2011). Individual Differences and a Science of Human Performance [Conference]. https://www.osti.gov/biblio/1109188

Bochev, P., Ridzal, D., Scovazzi, G., Shashkov, M., & Shashkov, M. (2011). Formulation, analysis and numerical study of an optimization-based conservative interpolation (remap) of scalar fields for arbitrary Lagrangian-Eulerian methods. Journal of Computational Physics, 230(13), pp. 5199-5225. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=79955387071&origin=inward

Moreland, K. (2011). IceT users' guide and reference. https://doi.org/10.2172/1005031

Bova, S.W. (2011). Coupling strategies for high-speed aeroheating problems [Conference]. https://www.osti.gov/biblio/1038237

Speed, A., Warrender, C., & Warrender, C. (2011). Adversary phase change detection using S.O.M. and text data [Conference]. https://www.osti.gov/biblio/1038179

McKenna, S.A., Ray, J., van Bloemen Waanders, B.G., & van Bloemen Waanders, B.G. (2011). Truncated multiGaussian fields and effective conductance of binary media. https://doi.org/10.2172/1011620

Eldred, M. (2011). Overview of DAKOTA Project (from the software perspective) [Presentation]. https://www.osti.gov/biblio/1671959

Tuminaro, R.S., Boman, E.G., & Boman, E.G. (2011). A Quasi-Algebraic Multigrid Approach to Fracture Problems Based on Extended Finite Elements. SIAM Journal on Scientific Computing. https://www.osti.gov/biblio/1110602

Boman, E.G., Gerstenberger, A., Tuminaro, R.S., & Tuminaro, R.S. (2011). Progress on Ice Mechanics Modeling and Scalable Algorithms for Ice Fracture [Conference]. https://www.osti.gov/biblio/1140504

Boman, E.G. (2011). Partitioning and Load-Balancing for Parallel Scientific Computing [Presentation]. https://www.osti.gov/biblio/1671954

Edwards, H.C., Arguello, J.G., Bartlett, R., Bouchard, J.F., Freeze, G., Knupp, P., Schultz, P.A., Urbina, A., Wang, Y., & Wang, Y. (2011). Nuclear Energy Advanced Modeling and Simulation Waste Integrated Performance and Safety Codes (NEAMS Waste IPSC) verification and validation plan. version 1. https://doi.org/10.2172/1028943

Swiler, L.P. (2011). Uncertainty Quantification: Introduction [Conference]. https://www.osti.gov/biblio/1110595

Lehoucq, R.B., Parks, M.L., & Parks, M.L. (2011). A Model for Nonlocal Advection [Conference]. https://www.osti.gov/biblio/1110616

Weirs, G. (2011). Visualizing Material Model Data Using PRISM [Conference]. https://www.osti.gov/biblio/1110583

Fabian, N., Glickman, M.R., & Glickman, M.R. (2011). Real-time individualized training vectors for experiential learning. https://doi.org/10.2172/1010417

Parks, M.L., Lehoucq, R.B., Kamm, J., & Kamm, J. (2011). An approach to nonlocal nonlinear advection. Multiscale Modeling and Simulation. https://www.osti.gov/biblio/1110568

Witzel, W. (2011). Single-Photon Excitation Lost in the Multi-Exciton Maze of a Nanocrystal [Conference]. https://www.osti.gov/biblio/1120875

Lane, J.M.D., Thompson, A.P., & Thompson, A.P. (2011). Characteristic curves and dynamic scaling in shockless compression using molecular dynamics [Conference]. https://www.osti.gov/biblio/1110557

Rogers, D. (2011). Topics in Sandia Cyber Research [Presentation]. https://www.osti.gov/biblio/1671943

Mitchell, S.A., Knupp, P., Ebeida, M., & Ebeida, M. (2011). Maximal Poisson-Disk Sampling [Conference]. https://www.osti.gov/biblio/1120910

Scovazzi, G. (2011). A Heterogeneous Multiscale Modeling Framework for Hierarchical Systems of Partial Differential Equations. Internation Journal for Numerical Methods in Fluids. https://www.osti.gov/biblio/1110536

Ward, H.L. (2011). A Persistent Index for a Variable-Length Record Database [Conference]. https://www.osti.gov/biblio/1110546

Leung, V.J., McLendon, W., & McLendon, W. (2011). Subgraph Isomorphism on a Multithreaded Shared Memory Architecture [Conference]. https://www.osti.gov/biblio/1110522

Landahl, A.J. (2011). Copy of 2011-01-21 Coogee SQIT Color Code FTQC Talk [Conference]. https://www.osti.gov/biblio/1120862

Scovazzi, G. (2011). Numerical Methods for Multi-material Fluids and Structures (MULTIMAT-2009). Internation Journal for Numerical Methods in Fluids. https://www.osti.gov/biblio/1110391

Criscenti, L., Schultz, P.A., & Schultz, P.A. (2011). Overview of Upscaling from Atomistic to Continuum Models for Nuclear Waste Glass Dissolution and Making Models of Multicomponent Glass [Conference]. https://www.osti.gov/biblio/1120892

Rajan, M., Vaughan, C.T., Doerfler, D.W., Lin, P.T., Pedretti, K., & Pedretti, K. (2011). Application-driven analysis of two generations of capability computing platforms : [Conference]. https://www.osti.gov/biblio/1282329

Ang, J.A., Hemmert, K.S., & Hemmert, K.S. (2011). Hardware Architectures Group Recap [Presentation]. https://www.osti.gov/biblio/1671914

Ebeida, M. (2011). LBMD: A layer-based Mesh Data structure Tailored for Generic API Infrastructures [Conference]. https://www.osti.gov/biblio/1110348

Oldfield, R. (2011). Six Degrees of Scientific Data: Reading Patterns for Extreme Scale Science IO [Conference]. https://www.osti.gov/biblio/1110373

Heroux, M.A. (2011). Building the Next Generation of Parallel Applications [Presentation]. https://www.osti.gov/biblio/1671933

Love, E., Rider, W., Scovazzi, G., & Scovazzi, G. (2011). Artificial Viscosity Flux Limiting in Lagrangian Shock Hydrodynamic Finite Element Computations [Conference]. https://www.osti.gov/biblio/1287391

Mitchell, S.A., Knupp, P., Ebeida, M., & Ebeida, M. (2011). A Linear Conforming Delaunay Triangulation method for GPU applications [Conference]. https://www.osti.gov/biblio/1120828

Ferreira, K.B. (2011). Detection and Correction of Silent Data Corruption for Large-Scale High-Performance Computing [Conference]. https://www.osti.gov/biblio/1110355

Robbins, J. (2011). Sensitivity Analysis and Parameter Optimization Using 1-D MHD Simulations of Magnetic Drive Experiments [Conference]. https://www.osti.gov/biblio/1110278

Rajan, M., Vaughan, C.T., Doerfler, D.W., Lin, P.T., Pedretti, K., Barrett, R.F., Hemmert, K.S., & Hemmert, K.S. (2011). Application-driven Analysis of Two Generations of Capability Computing Platforms: Purple and Cielo [Conference]. https://www.osti.gov/biblio/1141232

Schoenwald, D.A., Munoz-Ramos, K., McLendon, W., Russo, T.V., & Russo, T.V. (2011). The use of electric circuit simulation for power grid dynamics [Conference]. Proceedings of the American Control Conference. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=80053146241&origin=inward

Rohrer, B.R. (2011). Biologically inspired feature creation for multi-sensory perception [Conference]. Frontiers in Artificial Intelligence and Applications. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=80155209838&origin=inward

Littlewood, D.J. (2011). A nonlocal approach to modeling crack nucleation in AA 7075-T651 [Conference]. ASME 2011 International Mechanical Engineering Congress and Exposition, IMECE 2011. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84869179293&origin=inward

Rothganger, F., Warrender, C., Speed, A., Rohrer, B.R., Naugle, A.B., Trumbo, D., & Trumbo, D. (2011). Connecting cognitive and neural models [Conference]. Frontiers in Artificial Intelligence and Applications. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=80155148731&origin=inward

Littlewood, D.J. (2011). A nonlocal approach to modeling crack nucleation in AA 7075-T651 [Conference]. ASME 2011 International Mechanical Engineering Congress and Exposition, IMECE 2011. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84869179293&origin=inward

Wills, A.E., Wixom, R.R., Mattsson, T., & Mattsson, T. (2010). Calculating hugoniots for molecular crystals from first principles [Conference]. Proceedings - 14th International Detonation Symposium, IDS 2010. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84883370092&origin=inward

Speed, A. (2010). Architecture of PFC supports analogy, but PFC is not an analogy machine. Cognitive Neuroscience, 1(2), pp. 146-152. https://doi.org/10.1080/17588928.2010.481359

Rajan, M., Doerfler, D.W., & Doerfler, D.W. (2010). HPC application performance and scaling: Understanding trends and future challenges with application benchmarks on past, present and future tri-lab computing systems [Conference]. AIP Conference Proceedings. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=79954515249&origin=inward

Rajan, M., Doerfler, D.W., & Doerfler, D.W. (2010). HPC application performance and scaling: Understanding trends and future challenges with application benchmarks on past, present and future tri-lab computing systems [Conference]. AIP Conference Proceedings. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=79954515249&origin=inward

Tuminaro, R.S., Hu, J.J., Gaidamour, J., Siefert, C., Gerstenberger, A., & Gerstenberger, A. (2010). A flexible AMG framework centered on energy minimization [Conference]. https://www.osti.gov/biblio/1035650

Landahl, A.J. (2010). Prospects for topological quantum computing: Ising anyons [Presentation]. https://www.osti.gov/biblio/1675077

Weirs, G., Swiler, L.P., Adams, B.M., Rider, W., Eldred, M., & Eldred, M. (2010). Sensitivity analysis techniques applied to a model shock problem [Conference]. https://www.osti.gov/biblio/1035611

Robinson, D.B., Ferreira, K.B., Riesen, R., & Riesen, R. (2010). Reliability modeling of redundant computation for HPC systems [Conference]. https://www.osti.gov/biblio/1035340

Pedretti, K., Bridges, P.G., & Bridges, P.G. (2010). Opportunities for Leveraging OS Virtualization in High-End Supercomputing [Presentation]. https://www.osti.gov/biblio/1673867

Parks, M.L. (2010). Peridynamic Solid Mechanics and the Embedded Atom Model. Multiscale Modeling and Simulation. https://www.osti.gov/biblio/1121101

Diegert, C. (2010). A combinatorial method for tracing objects using semantics of their shape [Conference]. Proceedings - Applied Imagery Pattern Recognition Workshop. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=79956286164&origin=inward

Dalbey, K., Levy, M.N., & Levy, M.N. (2010). Generation of pareto optimal ensembles of calibrated parameter sets for climate models [Conference]. https://www.osti.gov/biblio/1035987

Jayaraman, S., Thompson, A.P., von Lilienfeld-Toal, O., & von Lilienfeld-Toal, O. (2010). Excess free energies and eutectics from molecular simulation [Conference]. https://www.osti.gov/biblio/1035995

Weirs, G., Kamm, J., Swiler, L.P., Adams, B.M., Rider, W., Eldred, M., & Eldred, M. (2010). Sensitivity analysis techniques applied to a model shock problem [Conference]. https://www.osti.gov/biblio/1035999

Plimpton, S.J. (2010). Molecular dynamics modeling at the mesoscale [Conference]. https://www.osti.gov/biblio/1035984

Bochev, P., Paskaleva, B.S., & Paskaleva, B.S. (2010). Arctic Sea ice model sensitivities [Conference]. https://www.osti.gov/biblio/1036006

Boslough, M., Levy, M.N., Backus, G.A., & Backus, G.A. (2010). Robust emergent climate phenomena associated with the high-sensitivity tail [Conference]. https://www.osti.gov/biblio/1035994

Petti, J.P., Silling, S.A., & Silling, S.A. (2010). Sandia National Laboratories/U.S. Nuclear Regulatory Commision: EMU Simulations [Presentation]. https://www.osti.gov/biblio/1673872

Ray, J., van Bloemen Waanders, B.G., McKenna, S.A., & McKenna, S.A. (2010). The effect of error models in the multiscale inversion of binary permeability fields [Conference]. https://www.osti.gov/biblio/1038997

Mattsson, T., Desjarlais, M.P., Wills, A.E., & Wills, A.E. (2010). Density Functional Theory (DFT) research at Sandia National Laboratories: from exchange-correlation functionals to a broad range of applications [Presentation]. https://www.osti.gov/biblio/1673877

Ferreira, K.B., Stearley, J., Oldfield, R., Laros, J.H., Pedretti, K.T.T., Brightwell, R.B., & Brightwell, R.B. (2010). Redundant computing for exascale systems. https://doi.org/10.2172/1011662

Phillips, C.A., Boman, E.G., Carr, R.D., Hart, W.E., Berry, J., Watson, J., Hart, D., McKenna, S.A., Riesen, L., & Riesen, L. (2010). Sensor placement for municipal water networks [Conference]. https://www.osti.gov/biblio/1038219

Grace, M.D., Witzel, W., Carroll, M.S., & Carroll, M.S. (2010). Combining DD with optimal control for improved QIP [Conference]. https://www.osti.gov/biblio/1039002

Mitchell, S.A. (2010). Geometric Comparison of Popular Mixture-Model Distances. Computer Aided Geometric Design. https://www.osti.gov/biblio/1141562