Publications

Moreland, K., Oldfield, R., & Oldfield, R. (2015). Formal metrics for large-scale parallel performance [Conference Poster]. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84984663150&origin=inward

Speed, A. (2015). Visual search in operational environments: Balancing operational constraints with experimental control [Conference Poster]. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). https://doi.org/10.1007/978-3-319-20816-9_51

Ciesko, J., Mateo, S., Teruel, X., Martorell, X., Ayguade, E., Labarta, J., Duran, A., de Supinski, B.R., Olivier, S.L., Li, K., Eichenberger, A.E., & Eichenberger, A.E. (2015). Towards task-parallel reductions in OpenMP [Conference Poster]. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). https://doi.org/10.1007/978-3-319-24595-9_14

Adams, S.S., Cole, K., Haass, M.J., Warrender, C., Jeffers, R., Burnham, L., Forsythe, J.C., & Forsythe, J.C. (2015). Situation Awareness and Automation in the Electric Grid Control Room [Conference Poster]. Procedia Manufacturing. https://doi.org/10.1016/j.promfg.2015.07.609

Weck, P.F., Kim, E., Tikare, V., Mitchell, J.A., & Mitchell, J.A. (2015). Mechanical properties of zirconium alloys and zirconium hydrides predicted from density functional perturbation theory. Dalton Transactions, 44(43), pp. 18769-18779. https://doi.org/10.1039/c5dt03403e

Littlewood, D.J., Hillman, M., Yreux, E., Bishop, J.E., Beckwith, F., Chen, J.S., & Chen, J.S. (2015). Implementation and verification of RKPM in the sierra/solidmechanics analysis code [Conference Poster]. ASME International Mechanical Engineering Congress and Exposition, Proceedings (IMECE). https://doi.org/10.1115/IMECE2015-51939

Fekete, S.P., Huang, K., Mitchell, J.S.B., Parekh, O., Phillips, C.A., & Phillips, C.A. (2015). Geometric hitting set for segments of few orientations [Conference Poster]. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). https://doi.org/10.1007/978-3-319-28684-6_13

Littlewood, D.J., Hillman, M., Yreux, E., Bishop, J.E., Beckwith, F., Chen, J.S., & Chen, J.S. (2015). Implementation and verification of RKPM in the sierra/solidmechanics analysis code [Conference Poster]. ASME International Mechanical Engineering Congress and Exposition, Proceedings (IMECE). https://doi.org/10.1115/IMECE2015-51939

Smith, T.M., Christon, M.A., Baglietto, E., Luo, H., & Luo, H. (2015). Assessment of models for near wall behavior and swirling flows in nuclear reactor sub-system simulations [Conference Poster]. Proceedings - 15th European Turbulence Conference, ETC 2015. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85085775729&origin=inward

Hopkins, S.E., Wilson, A.T., Silva, A.R., Forsythe, J.C., & Forsythe, J.C. (2015). Factors contributing to performance for cyber security forensic analysis [Conference Poster]. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). https://doi.org/10.1007/978-3-319-20376-8_18

Burch, N., D'Elia, M., Lehoucq, R.B., & Lehoucq, R.B. (2014). The exit-time problem for a Markov jump process. European Physical Journal: Special Topics, 223(14), pp. 3257-3271. https://doi.org/10.1140/epjst/e2014-02331-7

Kalashnikova, I., Barone, M., Arunajatesan, S., van Bloemen Waanders, B.G., & van Bloemen Waanders, B.G. (2014). Construction of energy-stable projection-based reduced order models. Applied Mathematics and Computation, 249, pp. 569-596. https://doi.org/10.1016/j.amc.2014.10.073

Lehoucq, R.B., D'Elia, M., Burch, N., & Burch, N. (2014). The exit-time problem for a Markov jump process. European Physical Journal. Special Topics, 223(14), pp. 3257-3271. https://doi.org/10.1140/epjst/e2014-02331-7

Bochev, P. (2014). A spectral mimetic least-squares method. Computers and Mathematics with Applications (Oxford), 68(11), pp. 1480-1502. https://doi.org/10.1016/j.camwa.2014.09.014

Barrett, R.F., Stark, D., Vaughan, C.T., Grant, R., Olivier, S.L., Bachman, W.B., & Bachman, W.B. (2014). Toward an Evolutionary Task Parallel Integrated MPI + X Programming Model [Conference Poster]. https://doi.org/10.1145/2712386.2712388

Silling, S.A. (2014). Introduction to peridynamics and thoughts on corrosion modeling [Presentation]. https://www.osti.gov/biblio/1242748

Munoz, F.D., Watson, J., & Watson, J. (2014). A Scalable Solution Framework for Stochastic Transmission and Generation Planning Problems. Draft. https://doi.org/10.2172/1762086

D'Elia, M., Bochev, P., & Bochev, P. (2014). Optimization?Based Coupling of Nonllocall and Locall diffusion models [Conference Poster]. https://www.osti.gov/biblio/1242780

Lofstead, G.F. (2014). LAN Impacts on Storage Systems and IO from a Hobbes OS and Runtime Perspective [Conference Poster]. https://www.osti.gov/biblio/1242794

Ray, J., Hou, Z., Huang, M., Swiler, L.P., & Swiler, L.P. (2014). Using runoff data to calibrate the Community Land Model [Conference Poster]. https://www.osti.gov/biblio/1319743

Brien, M.J.'., Medlin, D.L., Foiles, S.M., & Foiles, S.M. (2014). Investigating the Structure and Segregation of Hydrogen to (nearly) Σ3 Grain Boundaries [Presentation]. https://www.osti.gov/biblio/1504051

Roesler, E.L., Taylor, M.A., Boslough, M., Bosler, P.A., & Bosler, P.A. (2014). Arctic Storms in a Regionally Refined Atmospheric General Circulation Model [Conference Poster]. https://www.osti.gov/biblio/1314541

Moreland, K. (2014). US DOE Research and Development in HPC Scientific Visualization [Conference Poster]. https://www.osti.gov/biblio/1319748

Brightwell, R.B. (2014). Hobbes Extreme Scale OS [Presentation]. https://www.osti.gov/biblio/1504059

Perego, M., Kim, K., Maxey, M., Pan, W., Parks, M.L., Trask, N., Siefert, C., & Siefert, C. (2014). A Parallel Implicit Implementation of Smoothed Paricle Hydrodynamics for Electrokinetic Applications [Conference Poster]. https://www.osti.gov/biblio/1315417

Sargsyan, K., Najm, H.N., Safta, C., Michelsen, H.A., Bambha, R., Liu, Z., van Bloemen Waanders, B.G., & van Bloemen Waanders, B.G. (2014). Density Estimation Framework for Model Error Assessmen [Presentation]. https://www.osti.gov/biblio/1504062

Mitchell, J.A., Tikare, V., & Tikare, V. (2014). Numerical Simulation of Ni Grain Growth in a Thermal Gradient [Conference Poster]. https://www.osti.gov/biblio/1315397

Rudinger, K.M., Roi, ., Blume-Kohout, R.J., Nielsen, E., Bachman, W.B., & Bachman, W.B. (2014). Hyperaccuracy and Error Scaling in Gate Set Tomography [Conference Poster]. https://www.osti.gov/biblio/1315214

D'Elia, M., Bochev, P., & Bochev, P. (2014). Optimization?Based Coupling of Nonlocal and Local Diffusion Models [Conference Poster]. https://doi.org/10.1557/opl.2015.109

Vaughan, C.T., Dohrmann, C.R., & Dohrmann, C.R. (2014). Preliminary Performance of Salinas [Presentation]. https://www.osti.gov/biblio/1504094

Phipps, E.T. (2014). Embedded Uncertainty Quantification Methods via Stokhos. UQ Handbook. https://www.osti.gov/biblio/1185023

van der Merwe, C., Turner, D.Z., & Turner, D.Z. (2014). A peridynamic model for sleeved hydraulic fracture. International Journal of Damage Mechanics. https://www.osti.gov/biblio/1185024

Matzen, L.E., Haass, M.J., Silva, A.R., Trumbo, M.C.S., Adams, S.S., McNamara, L.A., Speed, A., & Speed, A. (2014). Effects of Expertise on Domain-General and Domain-Specific Visual Search [Conference Poster]. https://doi.org/10.1037/e524912015-054

Plimpton, S.J., Joo, J., Faulon, J., & Faulon, J. (2014). Statistical ensemble analysis for simulatingextrinsic noise-driven response in NF-κB signaling networks. BMC Systems Biology. https://www.osti.gov/biblio/1185028

Eldred, M., Swiler, L.P., Adams, B.M., & Adams, B.M. (2014). Overview of Selected DOE/NNSA Predictive Science Initiatives: the Predictive Science Academic Alliance Program and the DAKOTA Project [Conference Poster]. https://doi.org/10.2514/6.2015-0500

Grant, R., Olivier, S.L., Laros, J.H., Brightwell, R.B., Porterfield, A.K., & Porterfield, A.K. (2014). Metrics for evaluating energy saving techniques for resilient HPC systems [Conference]. Proceedings - IEEE 28th International Parallel and Distributed Processing Symposium Workshops, IPDPSW 2014. https://doi.org/10.1109/IPDPSW.2014.91

Brightwell, R.B., Barrett, B.W., Grant, R., Hammond, S., Hemmert, K.S., & Hemmert, K.S. (2014). An evaluation of MPI message rate on hybrid-core processors. International Journal of High Performance Computing Applications, 28(4), pp. 415-424. https://doi.org/10.1177/1094342014552085

Hu, J.J., Siefert, C., Plunkett, P., Atzberger, P.J., & Atzberger, P.J. (2014). Spatially adaptive stochastic methods for fluid-structure interactions subject to thermal fluctuations in domains with complex geometries. Journal of Computational Physics, 277(C), pp. 121-137. https://doi.org/10.1016/j.jcp.2014.07.051

Shulenburger, L., Mattsson, T., Wills, A.E., Magyar, R.J., Flicker, D., Root, S., & Root, S. (2014). Validating density-functional theory simulations at high energy-density conditions with liquid krypton shock experiments to 850 GPa on Sandia's Z machine. Physical Review B - Condensed Matter and Materials Physics, 90(18). https://doi.org/10.1103/PhysRevB.90.184105

Perego, M., Salinger, A.G., Phipps, E.T., Ridzal, D., Kouri, D.P., Tezaur, I.K., Price, S., Stadler, G., & Stadler, G. (2014). Adjoint-based Deterministic Inversion for Ice Sheets [Presentation]. https://www.osti.gov/biblio/1242148

Hu, J.J. (2014). Linear and Eigen-Solver Capability Area [Presentation]. https://www.osti.gov/biblio/1503795

Boman, E.G., Devine, K., Rajamanickam, S., & Rajamanickam, S. (2014). 2D Partitioning for Scalable Matrix Computations on Scale-Free Graphs [Presentation]. https://www.osti.gov/biblio/1503796

Stark, D., Olivier, S.L., & Olivier, S.L. (2014). Run Time Systems R&D with the Qthreads Multithreading Library [Presentation]. https://www.osti.gov/biblio/1503798

Stark, D., Olivier, S.L., & Olivier, S.L. (2014). Run Time Systems R&D with the Qthreads Multithreading Library [Presentation]. https://www.osti.gov/biblio/1503799

Walsh, T., Aquino, W., Ridzal, D., Kouri, D.P., van Bloemen Waanders, B.G., Urbina, A., & Urbina, A. (2014). Viscoelastic material inversion using Sierra-SD and ROL. https://doi.org/10.2172/1322276

Boman, E.G. (2014). Manycore Graph Algorithms and the Kokkos Library [Presentation]. https://www.osti.gov/biblio/1503802

Moreland, K. (2014). HPC Processing in ParaView [Presentation]. https://www.osti.gov/biblio/1367740

Moreland, K. (2014). Maintaining Interactivity in ParaView [Presentation]. https://www.osti.gov/biblio/1367638

Peterson, K., Bochev, P., Perego, M., Gao, X., & Gao, X. (2014). Implementation of a Second-Order Stabilized CVFEM using Intrepid [Conference Poster]. https://www.osti.gov/biblio/1367642

Debenedictis, E. (2014). Scaling Beyond Moore's Law with Processor-In-Memory-and-Storage (PIMS) [Presentation]. https://www.osti.gov/biblio/1367648

Ridzal, D., Kouri, D.P., & Kouri, D.P. (2014). Rapid Optimization Library [Conference Poster]. https://www.osti.gov/biblio/1367652

Cyr, E.C., Shadid, J.N., Phillips, E., Tuminaro, R.S., Pawlowski, R., Lin, P.T., Chacon, L., & Chacon, L. (2014). Block Preconditioning for Multi-physics: From Jacobi to Schur Complements [Presentation]. https://www.osti.gov/biblio/1367654

Kouri, D.P. (2014). Risk-Averse PDE-Constrained Optimization using the Conditional Value-At-Risk [Presentation]. https://doi.org/10.1137/140954556

Fabian, N., Moreland, K., Mauldin, J.A., Boeckel, B., Ayachit, U., Geveci, B., & Geveci, B. (2014). Instruction Memory Overhead of In Situ Visualization and Analysis Libraries on HPC Machines [Conference Poster]. https://www.osti.gov/biblio/1367724

Willenbring, J.M. (2014). Trilinos Framework and Tools Update [Presentation]. https://www.osti.gov/biblio/1514571

Bachman, W.B., Hoemmen, M.F., Mueller, F., & Mueller, F. (2014). Skeptical Programming and Selective Reliability [Conference Poster]. https://www.osti.gov/biblio/1367728

Moreland, K. (2014). VTK-m Logistics [Presentation]. https://www.osti.gov/biblio/1367593

Littlewood, D.J., Silling, S.A., Seleson, P.D., & Seleson, P.D. (2014). Local-Nonlocal Coupling for Modeling Fracture [Conference Poster]. https://www.osti.gov/biblio/1367599

Ridzal, D. (2014). Intrelab [Conference Poster]. https://www.osti.gov/biblio/1367602

Silling, S.A. (2014). Peridynamics and continuum damage mechanics [Conference Poster]. https://www.osti.gov/biblio/1367603

Olivier, S.L. (2014). Recent and Upcoming Enhancements to OpenMP [Presentation]. https://www.osti.gov/biblio/1367619

Berry, J., Phillips, C.A., Hendrickson, B.A., & Hendrickson, B.A. (2014). Workshop on Streaming Graph Algorithms (WSGA) Overview [Presentation]. https://www.osti.gov/biblio/1514565

Gallis, M.A., Koehler, T.P., Torczynski, J.R., Plimpton, S.J., & Plimpton, S.J. (2014). DSMC Simulations of the Richtmyer-Meshkov Instability [Conference Poster]. https://www.osti.gov/biblio/1367623

Doerfler, D.W. (2014). First Experiences with 64-bit ARM Moonshot [Conference Poster]. https://www.osti.gov/biblio/1504867

Heroux, M.A. (2014). Toward the Next Generation of Portable Scalable HPC Applications [Conference Poster]. https://www.osti.gov/biblio/1505047

Grant, R. (2014). Power API for HPC: Standardizing Power Management and Control [Conference Poster]. https://www.osti.gov/biblio/1505050

Mitchell, J.A. (2014). Peridynamics Ordinary Isotropic Plasticity Model [Conference Poster]. https://www.osti.gov/biblio/1367575

Boslough, M., Jennings, B.J., Carvey, B.J., Fogleman, W.E., & Fogleman, W.E. (2014). FEMA asteroid impact tabletop exercise simulations [Conference Poster]. https://doi.org/10.1016/j.proeng.2015.04.007

Bachman, W.B. (2014). APEX Initial Vendor Roadmap Presentation Guidance [Conference Poster]. https://www.osti.gov/biblio/1314543

Debonis, D., Levenhagen, M., & Levenhagen, M. (2014). A Prototype of a Power API Framework [Conference Poster]. https://www.osti.gov/biblio/1315438

Torczynski, J.R., Romero, L., Clausen, J., O'Hern, T.J., & O'Hern, T.J. (2014). Vibration-Induced Rectified Motion of a Piston in a Liquid-Filled Cylinder with Bellows to Mimic Gas Regions [Conference Poster]. https://www.osti.gov/biblio/1319746

Hendrickson, B.A., Leland, R.W., & Leland, R.W. (2014). Graphs and HPC in the '90s: A Distant Mirror or Merely Distant? [Conference Poster]. https://www.osti.gov/biblio/1315147

Trott, C.R. (2014). Designing the Future: How Successful Codesign Helps Shape Hardware and Software Development [Conference Poster]. https://www.osti.gov/biblio/1504081

Bachman, W.B. (2014). SC14 EEHPC Workshop - Energy Efficiency Considerations for HPC Procurement Documents: 2014 [Conference Poster]. https://www.osti.gov/biblio/1315607

Bachman, W.B., Ang, J.A., Hammond, S., Kelly, S.M., & Kelly, S.M. (2014). Sandia's Advanced Architecture Test Beds [Conference Poster]. https://www.osti.gov/biblio/1315605

Stark, D. (2014). Early Experiences Co-Scheduling Work and Communication Tasks for Hybrid MPI+X Applications [Conference Poster]. https://doi.org/10.1109/ExaMPI.2014.6

Verzi, S.J., Aimone, J.B., & Aimone, J.B. (2014). Quantification of Neural Computation [Conference Poster]. https://www.osti.gov/biblio/1315443

Tate, A., Kamil, A., Dubey, A., Groblinger, A., Chamberlain, B., Goglin, B., Edwards, H.C., Newburn, C.J., Padua, D., Unat, D., Jeannot, E., Hannig, F., Tobias, G., Ltaief, H., Sexton, J., Labarta, J., Shalf, J., Fuerlinger, K., O'Brien, K., … Leung, V.J. (2014). Programming Abstractions for Data Locality. https://doi.org/10.2172/1172915

Rothganger, F., Trumbo, D., Warrender, C., Aimone, J.B., & Aimone, J.B. (2014). How to model the whole brain? [Conference Poster]. https://www.osti.gov/biblio/1315167

Rudinger, K.M., Nielsen, E., Bachman, W.B., Blume-Kohout, R.J., & Blume-Kohout, R.J. (2014). Gate Set Tomography [Conference Poster]. https://www.osti.gov/biblio/1315140

Kuberry, P. (2014). Using Intrelab to Quickly Prototype Interface Algorithms [Conference Poster]. https://www.osti.gov/biblio/1319660

Debenedictis, E. (2014). Scaling Beyond Moore's Law with Processor-In-Memory-and-Storage (PIMS) [Presentation]. https://www.osti.gov/biblio/1504036

Hoekstra, R.J., Summers, R.M., & Summers, R.M. (2014). HPC Mod/Sim at Sandia [Presentation]. https://www.osti.gov/biblio/1504041

Clausen, J., Torczynski, J.R., Romero, L., O'Hern, T.J., & O'Hern, T.J. (2014). Simulating Rectified Motion in a Piston Assembly Subjected to Vibrational Acceleration [Conference Poster]. https://www.osti.gov/biblio/1315671

Shadid, J.N. (2014). Scalable Implicit Resistive MHD with Stabilized Finite Element Methods and Fully-coupled Newton-Krylov-AMG Solution Methods [Presentation]. https://www.osti.gov/biblio/1504042

Debenedictis, E., Aimone, J.B., & Aimone, J.B. (2014). Review of "Cross Neural" Research Effort [Presentation]. https://www.osti.gov/biblio/1242706

Klise, K.A., Siirola, J.D., Seth, A., Laird, C., Haxton, T., & Haxton, T. (2014). A Testing Framework for Contamination Source Identication Methods. Journal of Water Resources Planning and Management. https://www.osti.gov/biblio/1184986

Bosler, P.A., Kent, J., Kransy, R., Jablonowski, C., & Jablonowski, C. (2014). Adaptive particle methods for global geophysical flow [Conference Poster]. https://www.osti.gov/biblio/1242714

Voth, T.E. (2014). The extended Finite Element Method and its Application to Multi-Material Hydro-dynamics in ALEGRA [Presentation]. https://www.osti.gov/biblio/1242722

Conradie, J., Turner, D.Z., & Turner, D.Z. (2014). Scalability of Fixed-Radius Searching in Meshless Methods for Heterogeneous Architectures. Advances in Engineering Software. https://www.osti.gov/biblio/1184991

Voth, T.E., Mosso, S.J., Sanchez, J.J., & Sanchez, J.J. (2014). XFEM for Multi-Material Eulerian Solid/Hydrodynamics [Presentation]. https://www.osti.gov/biblio/1242738

Swiler, L.P. (2014). Sensitivity Analysis of the Gap Heat Transfer Model in BISON [Conference Poster]. https://www.osti.gov/biblio/1242739

Lane, J.M.D., Thompson, A.P., Vogler, T.J., & Vogler, T.J. (2014). Enhanced densification under shock compression in porous silicon. Physical Review B - Condensed Matter and Materials Physics, 90(13). https://doi.org/10.1103/PhysRevB.90.134311

Aimone, J.B. (2014). Regulation and Function of Adult Neurogenesis. From Genes to Cognition. Physiological Reviews, 94(4), pp. 991-1026. https://doi.org/10.1152/physrev.00004.2014

Phipps, E.T., Edwards, H.C., Hu, J.J., & Hu, J.J. (2014). Improving Performance of Uncertainty Quantification Methods on Advanced Computing Architectures [Presentation]. https://www.osti.gov/biblio/1241732

Rajamanickam, S., Slota, G.M., Madduri, K., & Madduri, K. (2014). War Stories : Graph Algorithms in GPUs [Presentation]. https://www.osti.gov/biblio/1241733

Hansen, G., Mish, S.P., Xavier, P.G., & Xavier, P.G. (2014). Implementation of Contact Global Search using Kokkos [Conference Poster]. https://www.osti.gov/biblio/1241734

Carpenter, J.H., Robinson, A.C., Wills, A.E., Drake, R.R., Rider, W., Debusschere, B.J., & Debusschere, B.J. (2014). Lessons From Uncertainty Propagation Using Tabular Multiphase Equations of State [Presentation]. https://www.osti.gov/biblio/1241735

Mosso, S.J., Kramer, R.M.J., Voth, T.E., & Voth, T.E. (2014). A Comparison of Alternating Direction Swept Remap and Intersection Remap in the X-FEM Alegra Code [Presentation]. https://www.osti.gov/biblio/1241745

Hoemmen, M.F., Bachman, W.B., Mueller, F., & Mueller, F. (2014). Resilient iterative linear solvers via skeptical programming [Presentation]. https://www.osti.gov/biblio/1241746