Publications

Boman, E.G., Madduri, K., Rajamanickam, S., Wolf, M., & Wolf, M. (2015). High-Performance Computing for Extreme-Scale Data Analytics [Conference Poster]. https://www.osti.gov/biblio/1253084

Jakeman, J.D. (2015). Sampling and Preconditioning Strategies for $\ell_1$-minimization [Conference Poster]. https://www.osti.gov/biblio/1253294

Cyr, E.C., Shadid, J.N., Wildey, T., Hensinger, D.M., Robinson, A.C., Rider, W., Scovazzi, G., & Scovazzi, G. (2015). IMEX Lagrangian Methods [Conference Poster]. https://www.osti.gov/biblio/1253301

D'Elia, M., Bochev, P., & Bochev, P. (2015). An Optimization-Based coupling of Local and Nonlocal models [Presentation]. https://www.osti.gov/biblio/1253305

Bettencourt, M.T. (2015). Mini-PIC A Next Generation PIC Testbed [Conference Poster]. https://www.osti.gov/biblio/1253307

Lefantzi, S., Arunajatesan, S., Dechant, L., Hou, Z., Huang, M., Sargsyan, K., Swiler, L.P., & Swiler, L.P. (2015). Bayesian calibration of engineering and scientific models using surrogates [Conference Poster]. https://www.osti.gov/biblio/1253310

Shadid, J.N. (2015). Approximate Block Factorization Preconditioners for Scalable Solution of Multiphysics MHD Systems [Conference Poster]. https://www.osti.gov/biblio/1253568

Edwards, H.C., Trott, C.R., & Trott, C.R. (2015). Use of C++11 Features in Kokkos [Presentation]. https://www.osti.gov/biblio/1514048

Kuberry, P., Lee, H., & Lee, H. (2015). Decoupling Navier-Stokes / St. Venant-Kirchhoff Fluid-Structure Interaction by Optimization [Conference Poster]. https://www.osti.gov/biblio/1254693

Bachman, W.B., Olivier, S.L., Ferreira, K., Shipman, G., Shu, W., & Shu, W. (2015). Exploring MPI Application Performance Under Power Capping on the Cray XC40 Platform [Conference Poster]. https://www.osti.gov/biblio/1258232

Wills, A.E. (2015). Towards a Density Functional Theory Exchange-Correlation Functional for f-electron elements and compounds [Conference Poster]. https://www.osti.gov/biblio/1258233

Schultz, P.A. (2015). Modeling charged defects and defects levels in semiconductors and oxides with DFT: An improved inside-out perspective [Presentation]. https://www.osti.gov/biblio/1258241

Schultz, P.A. (2015). Defect reaction network in Si-doped InAs. Numerical predictions. https://doi.org/10.2172/1182682

Wolf, M., Berry, J., Stark, D., & Stark, D. (2015). A Task-Based Linear Algebra Building Blocks Approach for Scalable Graph Analytics [Conference Poster]. https://doi.org/10.1109/HPEC.2015.7322450

Wolf, M., Miller, B., & Miller, B. (2015). Improving the Performance of Graph Analysis Through Partitioning with Sampling [Conference Poster]. https://doi.org/10.1109/HPEC.2015.7322457

Robinson, A.C., Debusschere, B.J., Carpenter, J.H., & Carpenter, J.H. (2015). Electromagnetic Continuum Mechanics in ALEGRA and Moving toward Uncertainty Quantification in Predictive Design [Presentation]. https://www.osti.gov/biblio/1258165

Phillips, E., Shadid, J.N., Cyr, E.C., & Cyr, E.C. (2015). Block Preconditioners for Resistive MHD in Vector Potential Form [Conference Poster]. https://www.osti.gov/biblio/1258166

Shadid, J.N. (2015). Approximate Block Factorization Preconditioners for Scalable Solution of Multiphysics MHD Systems [Presentation]. https://www.osti.gov/biblio/1514049

Shadid, J.N. (2015). Scalable Implicit / IMEX Resistive MHD with Stabilized Finite Element Methods and Fully-coupled Newton-Krylov-AMG Solution Methods [Presentation]. https://www.osti.gov/biblio/1514050

Fisher, T.C., Bova, S.W., Lin, P.T., & Lin, P.T. (2015). CFD for Next Generation Hardware: Experiences with Proxy Applications [Conference Poster]. https://www.osti.gov/biblio/1258185

Riesen, R., MacCabe, B., Gerofi, B., Lombard, D., Lange, J., Bachman, W.B., Ferreira, K., Lang, M., Keppel, P., Wisniewski, R., Brightwell, R.B., Inglett, T., Park, Y., Ishikawa, Y., & Ishikawa, Y. (2015). Panel: What is a Lightweight Kernel? [Conference Poster]. https://www.osti.gov/biblio/1258200

Lofstead, G.F., Bachman, W.B., Kocoloski, B., Lange, J.R., Abbasi, H., Bernholdt, D., Jones, T., Dayal, J., Evans, N., Lang, M., Bridges, P.G., & Bridges, P.G. (2015). System-Level Support for Composition of Applications [Conference Poster]. https://www.osti.gov/biblio/1258215

Bennett, J., Wilke, J., Slattengren, N., Teranishi, K., Lin, P.T., Sjaardema, G.D., Kolla, H., & Kolla, H. (2015). Asynchronous Many-Task Programming Models for Next Generation Platforms [Presentation]. https://www.osti.gov/biblio/1258268

Bennett, J., Wilke, J., Slattengren, N., Teranishi, K., Lin, P.T., Sjaardema, G.D., Kolla, H., Knight, S., & Knight, S. (2015). A Comparative Analysis of Asynchronous Many-Task Programming Models for Next Generation Platforms [Conference Poster]. https://www.osti.gov/biblio/1258269

Bennett, J., Wilke, J., Slattengren, N., Teranishi, K., Kolla, H., Lin, P.T., Sjaardema, G.D., & Sjaardema, G.D. (2015). What is the DHARMA project? [Presentation]. https://www.osti.gov/biblio/1258270

Bettencourt, M.T. (2015). Development of the EMPRESS/EMPIRE Code for Next Generation Platforms [Presentation]. https://www.osti.gov/biblio/1258273

Burchett, D.L., Chen, R.L.Y., Phillips, C.A., Richard, J., & Richard, J. (2015). Next-generation Algorithms for Assessing Infrastructure Vulnerability and Optimizing System Resilience. https://doi.org/10.2172/1183056

Plimpton, S.J. (2015). LAMMPS and classical molecular dynamics for materials modeling [Conference Poster]. https://www.osti.gov/biblio/1254702

Berry, J., Collins, M., Kearns, A., Phillips, C.A., Saia, J., & Saia, J. (2015). Cyber Graph Queries for Geographically Distributed Data Centers. https://doi.org/10.2172/1183059

Perego, M. (2015). Coupling ice sheet momentum and thickness evolution equations [Conference Poster]. https://www.osti.gov/biblio/1255029

Niederhaus, J.H.J., Siefert, C., Petney, S., & Petney, S. (2015). Discussion of the Aztec/ML solver for transient magnetics [Presentation]. https://www.osti.gov/biblio/1255047

Ross, R., Grider, G., Felix, E., Gary, M., Klasky, S., Oldfield, R., Shipman, G., Wu, J., & Wu, J. (2015). Storage Systems and Input/Output to Support Extreme Scale Science. https://doi.org/10.2172/1459089

Turner, D.Z., Lehoucq, R.B., & Lehoucq, R.B. (2015). Towards a Generalized Framework for Digital Image Correlation [Presentation]. https://www.osti.gov/biblio/1255433

Shan, T. (2015). Enabling Performance Portability for Large-scale Atomistic Simulations on Next-Generation Computing Architectures [Conference Poster]. https://www.osti.gov/biblio/1255784

Blume-Kohout, R.J. (2015). How distinguishable are two quantum processes? [Presentation]. https://www.osti.gov/biblio/1255785

Willenbring, J.M. (2015). Replicated computational results (RCR) report for "BLIS: A framework for rapidly instantiating BLAS functionality". ACM Transactions on Mathematical Software, 41(3), pp. 1-4. https://doi.org/10.1145/2738033

Ray, J., Lee, J., Yadav, V., Lefantzi, S., Michalak, A.M., van Bloemen Waanders, B.G., & van Bloemen Waanders, B.G. (2015). A sparse reconstruction method for the estimation of multi-resolution emission fields via atmospheric inversion. Geoscientific Model Development, 8(4), pp. 1259-1273. https://doi.org/10.5194/gmd-8-1259-2015

Magyar, R.J., Root, S., Mattsson, T., Cochrane, K.R., Flicker, D., & Flicker, D. (2015). Ethane-xenon mixtures under shock conditions. Physical Review B - Condensed Matter and Materials Physics, 91(13). https://doi.org/10.1103/PhysRevB.91.134109

du, Q., Lehoucq, R.B., Tartakovsky, A.M., & Tartakovsky, A.M. (2015). Integral approximations to classical diffusion and smoothed particle hydrodynamics. Computer Methods in Applied Mechanics and Engineering, 286(C), pp. 216-229. https://doi.org/10.1016/j.cma.2014.12.019

Hoffman, E.L., Friedman-Hill, E.J., Gibson, M., Orient, G., Adams, B.M., Olson, K., & Olson, K. (2015). Sensitivity Analysis (SA) and Uncertainty Quantification (UQ) Tools in Sandia Analysis Workbench (SAW) [Conference Poster]. https://www.osti.gov/biblio/1531281

Gamell, M., Teranishi, K., Heroux, M.A., Mayo, J., Kolla, H., Chen, J., Parashar, M., & Parashar, M. (2015). Exploring Failure Recovery for Stencil-based Applications at Extreme Scales [Conference Poster]. https://www.osti.gov/biblio/1246303

Teranishi, K., Heroux, M.A., Hoemmen, M.F., Chien, A., Balaji, P., Beckman, P., Dun, N., Fang, A., Fujita, H., Iskra, K., Rubenstein, Z., Zheng, Z., Schreiber, R., Hammond, J., Dinan, J., Laguna, I., Richards, D., Dubey, A., van Straalen, B., Siegel, A., & Siegel, A. (2015). Versioned Distributed Arrays for Resilience in Scientific Applications: Global View Resilience [Conference Poster]. https://www.osti.gov/biblio/1246304

Ebeida, M., Mitchell, S.A., Littlewood, D.J., Bishop, J.E., Rushdi, A., & Rushdi, A. (2015). Unleashing the Power of Voronoi Decompositions in low and high dimensions [Presentation]. https://www.osti.gov/biblio/1246308

Eldred, M., Heimbach, P., Jackson, C., Jakeman, J.D., Perego, M., Price, S., Salinger, A.G., Stadler, G., Tezaur, I.K., & Tezaur, I.K. (2015). From Deterministic Inversion to Uncertainty Quantification: Planning a Long Journey in Ice Sheet Modeling [Conference Poster]. https://www.osti.gov/biblio/1246877

Fisher, T.C., Bova, S.W., Weirs, G., Wildey, T., & Wildey, T. (2015). Propagating Discretization Error Estimates in Compressible Turbulent Flow Simulations [Presentation]. https://www.osti.gov/biblio/1246879

Widener, P. (2015). GT PREFER Career Talk [Conference Poster]. https://www.osti.gov/biblio/1247094

Crossno, P.J., Shead, T.M., Hunt, W.L., Sielicki, M., Lochridge, D.R., Arrillaga, G.E., & Arrillaga, G.E. (2015). Slycat Ensemble Visualization and Analysis [Presentation]. https://www.osti.gov/biblio/1247106

Clark, B.W., Valentin, M.A., & Valentin, M.A. (2015). Topology Optimzation for Next-Generation Design [Presentation]. https://www.osti.gov/biblio/1531277

Keiter, E., Swiler, L.P., & Swiler, L.P. (2015). Uncertainty Quantification Methods for Electrical Simulation [Presentation]. https://www.osti.gov/biblio/1248668

Spotz, W.F., Demeshko, I., Smith, T.M., Fike, J., & Fike, J. (2015). Aeras: A Next Generation Atmosphere Model [Conference Poster]. https://www.osti.gov/biblio/1248670

Bachman, W.B., Wilson, A.T., & Wilson, A.T. (2015). Trackable: A Toolset for Trajectory Analysis [Presentation]. https://www.osti.gov/biblio/1248680

Moreland, K., Scott, W.A., & Scott, W.A. (2015). Large Scale Visualization with ParaView (ICS 2015 Tutorial Summary) [Conference Poster]. https://www.osti.gov/biblio/1248682

Brandt, J.M., Debonis, D., Gentile, A.C., Lujan, J., Martin, C., Martinez, D., Olivier, S.L., Bachman, W.B., Taerat, N., Velarde, R., & Velarde, R. (2015). Enabling Advanced Operational Analysis Through Multi-subsystem Data Integration on Trinity [Conference Poster]. https://www.osti.gov/biblio/1248686

Adams, S.S., Cole, K., Haass, M.J., Jeffers, R., Warrender, C., Burnham, L., Forsythe, J.C., & Forsythe, J.C. (2015). Situation awareness and automation in the electric grid control room [Conference Poster]. https://www.osti.gov/biblio/1248689

Lofstead, G.F., Curry, M.L., Fabian, N., Kordenbrock, T., Mukherjee, S., Oldfield, R., Sjaardema, G.D., Templet, G.J., Ulmer, C.D., Widener, P., & Widener, P. (2015). Enabling Capabilities for Intergrated Application Workflows [Presentation]. https://www.osti.gov/biblio/1248699

Plimpton, S.J., Gallis, M.A., & Gallis, M.A. (2015). SPARTA: A Scalable Flexible Open-Source Direct Simulation Monte Carlo Code [Presentation]. https://www.osti.gov/biblio/1248702

Tezaur, I.K., van Bloemen Waanders, B.G., Arunajatesan, S., Barone, M., Fike, J., & Fike, J. (2015). Stabilization of Projection-Based Reduced Order Models via Optimization-Based Eigenvalue Reassignment [Conference Poster]. https://www.osti.gov/biblio/1248705

Parks, M.L., Lindsay, P., Prakash, A., & Prakash, A. (2015). A Multi-Time-Step Method for Partitioned Time Integration of Peridynamics [Conference Poster]. https://www.osti.gov/biblio/1248594

Resnick, D.R. (2015). New Resilience Capabilities with Micron?s HMC [Conference Poster]. https://www.osti.gov/biblio/1504077

Moreland, K., Oldfield, R., & Oldfield, R. (2015). Formal Metrics for Large-Scale Parallel Performance [Conference Poster]. https://www.osti.gov/biblio/1248714

Kroeger, T., Zage, D.J., Phillips, C.A., Saia, J., Benson, T.R., & Benson, T.R. (2015). Secure Distributed Set Membership through Secret Sharing [Presentation]. https://www.osti.gov/biblio/1248829

Scholten, T.L. (2015). Look out Below! Computing on the Small Scale [Conference Poster]. https://www.osti.gov/biblio/1248832

Bochev, P., D'Elia, M., & D'Elia, M. (2015). An Optimization-Based Local to Nonlocal Coupling Method [Conference Poster]. https://www.osti.gov/biblio/1530976

Vaughan, C.T., Rajan, M., Dinge, D., Dohrmann, C.R., Glass, M.W., Franko, K.J., Pierson, K.H., Tupek, M.R., & Tupek, M.R. (2015). Preperation of Codes for Trinity [Conference Poster]. https://www.osti.gov/biblio/1248836

Vaughan, C.T., Rajan, M., Dinge, D., Dohrmann, C.R., Glass, M.W., Franko, K.J., Pierson, K.H., Tupek, M.R., & Tupek, M.R. (2015). Preperation of Codes for Trinity [Conference Poster]. https://www.osti.gov/biblio/1248837

Hammond, S. (2015). SST Integration Updates and Successes [Conference Poster]. https://www.osti.gov/biblio/1248839

Rodrigues, A., Jayaraj, J., Hammond, S., Voskuilen, G.R., & Voskuilen, G.R. (2015). The Potential and Perils of Multi-Level Memory [Conference Poster]. https://www.osti.gov/biblio/1530978

McClain, J.T., Silva, A.R., Avina, G.E., Nauer, K., Speed, A., Abbott, R.G., Matzen, L.E., Haass, M.J., Trumbo, D., & Trumbo, D. (2015). Measuring Human Performance within Computer Security Incident Response Teams [Presentation]. https://www.osti.gov/biblio/1530979

Blume-Kohout, R.J., Bachman, W.B., Nielsen, E., Rudinger, K.M., & Rudinger, K.M. (2015). Gate Set Tomography; Robust efficient and hyperaccurate characterization of quantum logic gates [Presentation]. https://www.osti.gov/biblio/1530981

Petney, S., Garasi, C.J., & Garasi, C.J. (2015). Providing Relevance to an Engineering-Focused Organization: Detonator Computational Multiphysics [Presentation]. https://www.osti.gov/biblio/1248845

Devine, K., Boman, E.G., Rajamanickam, S., & Rajamanickam, S. (2015). Distributing Linear Systems for Parallel Computation [Conference Poster]. https://www.osti.gov/biblio/1506853

Silling, S.A. (2015). Upscaling Material Properties and Damage in Peridynamics [Conference Poster]. https://www.osti.gov/biblio/1248852

Parekh, O., Wendt, J.D., Shulenburger, L., Landahl, A.J., Moussa, J.E., Aidun, J.B., & Aidun, J.B. (2015). Benchmarking Adiabatic Quantum Optimization for Complex Network Analysis. https://doi.org/10.2172/1459086

Levy, S.L.N., Ferreira, K., Bridges, P.G., & Bridges, P.G. (2015). Similarity Engine: Using Content Similarity to Improve Memory Resilience [Conference Poster]. https://www.osti.gov/biblio/1530987

Shipman, G., McCormick, P., Bachman, W.B., Olivier, S.L., Ferreira, K., Chen, J., Sankaran, R., Treichler, S., Aiken, A., Bauer, M., & Bauer, M. (2015). Dynamic Task Scheduling to Mitigate System Performance Variability [Conference Poster]. https://www.osti.gov/biblio/1249032

Tuncer, O., Leung, V.J., Coskun, A.K., & Coskun, A.K. (2015). PaCMap: Topology Mapping of Unstructured Communication Patterns onto Non-contiguous Allocations [Conference Poster]. https://www.osti.gov/biblio/1249042

Mitchell, J.A. (2015). Ordinary Isotropic Peridynamic Models: Position Aware Viscoelastic(PAVE) [Conference Poster]. https://www.osti.gov/biblio/1249043

Slota, G.M., Rajamanickam, S., Madduri, K., & Madduri, K. (2015). Supercomputing for Web Graph Analytics [Conference Poster]. https://www.osti.gov/biblio/1249045

Moore, D., Ober, C.C., Rodacy, P.J., Nelson, C., & Nelson, C. (2015). Wave Speed Propagation Measurements on Highly Attenuative Heated Materials [Conference Poster]. https://doi.org/10.1016/j.phpro.2015.08.274

Parks, M.L., Lindsay, P., Prakash, A., & Prakash, A. (2015). A Multi-Time-Step Method for Partitioned Time Integration of Peridynamics [Conference Poster]. https://www.osti.gov/biblio/1249290

Magyar, R.J. (2015). Density Functional Theory of Extreme Environments [Presentation]. https://www.osti.gov/biblio/1249291

Bochev, P., Kuberry, P., & Kuberry, P. (2015). A variational flux recovery approach for elastodynamics problems with interfaces [Conference Poster]. PANACM 2015 - 1st Pan-American Congress on Computational Mechanics, in conjunction with the 11th Argentine Congress on Computational Mechanics, MECOM 2015. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84938717654&origin=inward

Lin, P.T., Shadid, J.N., Hu, J.J., Cyr, E.C., Pawlowski, R., Prokopenko, A., & Prokopenko, A. (2015). On the Performance of Fully-Coupled Algebraic Multigrid Preconditioning at Large-Scale: Application to FEM CFD/MHD [Conference Poster]. https://www.osti.gov/biblio/1249295

Doerfler, D.W., Tupek, M.R., Hammond, S., & Hammond, S. (2015). An investigation of compiler vectorization on current and next-generation Intel processors using benchmarks and Sandia?s Sierra applications [Conference Poster]. https://www.osti.gov/biblio/1249446

Vineyard, C.M., Verzi, S.J., Aimone, J.B., James, C.D., Heileman, G.L., & Heileman, G.L. (2015). Repeated Play of the SVM Game as a Means of Adaptive Classification [Conference Poster]. https://www.osti.gov/biblio/1249447

James, C.D., Aimone, J.B., Plimpton, S.J., Naegle, J.H., Marinella, M., Dixon, K.R., Follett, D., & Follett, D. (2015). Hardware Acceleration of Adaptive Neural Algorithms (HAANA) [Presentation]. https://www.osti.gov/biblio/1249448

Moreland, K. (2015). VTK-m (DOECGF 2015) [Presentation]. https://www.osti.gov/biblio/1249462

Moreland, K. (2015). What?s New in ParaView (DOECGF 2015) [Presentation]. https://www.osti.gov/biblio/1249463

Shadid, J.N. (2015). Approximate Block Factorization Preconditioners for Scalable Solution of Multiphysics MHD Systems [Conference Poster]. https://www.osti.gov/biblio/1249465

Oldfield, R. (2015). You Got Visualization in my Simulation: Integration of Simulation Analysis and Visualization at Extreme Scales [Conference Poster]. https://www.osti.gov/biblio/1249471

Booth, J.D., Korta, J., Zhao, H., Kandemir, M., Raghavan, P., & Raghavan, P. (2015). Phase Detection with Hidden Markov Models for DVFS on Many-Core Processors [Conference Poster]. https://www.osti.gov/biblio/1249472

van Bloemen Waanders, B.G., Kouri, D.P., Ridzal, D., Uryasef, S., & Uryasef, S. (2015). Optimization Under Uncertainty for Magnetic Confinement Fusion [Conference Poster]. https://www.osti.gov/biblio/1250731

Kegelmeyer, W.P., Shead, T.M., Bachman, W.B., Wilson, A.T., & Wilson, A.T. (2015). Characterizing and Detecting Aircraft Identity and Diversion [Conference Poster]. https://www.osti.gov/biblio/1251131

Anderson, B., Nauer, K., Lee, W.K., McClain, J.T., Abbott, R.G., & Abbott, R.G. (2015). Tracer FIRE Cyberforensic Training Platform [Conference Poster]. https://www.osti.gov/biblio/1251138

Ferreira, K. (2015). Revisiting Checkpointing for Exascale-Class Systems [Conference Poster]. https://www.osti.gov/biblio/1251139

Brandt, J.M., Debonis, D., Gentile, A.C., Lujan, J., Martin, C., Martinez, D., Olivier, S.L., Bachman, W.B., Taerat, N., Velarde, R., & Velarde, R. (2015). Enabling Advanced Operational Analysis Through Multi-Subsystem Data Integration on Trinity [Conference Poster]. https://www.osti.gov/biblio/1251362

Dunlavy, D.M., Wolf, M., & Wolf, M. (2015). Clustering network data using graphs hypergraphs and tensors [Conference Poster]. https://www.osti.gov/biblio/1251364

Wildey, T., Shadid, J.N., Cyr, E.C., Constantine, P., & Constantine, P. (2015). Enabling Efficient Uncertainty Quantification Using Adjoint-based Techniques. https://doi.org/10.2172/1179153

Hammond, S., Voskuilen, G.R., & Voskuilen, G.R. (2015). Scale-Free Memory Access Patterns [Conference Poster]. https://www.osti.gov/biblio/1251555

Bochev, P., Moe, S.A., Peterson, K., Ridzal, D., & Ridzal, D. (2015). A conservative, optimization-based semi-lagrangian spectral element method for passive tracer transport [Conference Poster]. COUPLED PROBLEMS 2015 - Proceedings of the 6th International Conference on Coupled Problems in Science and Engineering. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84938700932&origin=inward