Publications

Hart, W.E. (2003). SGOPT User Manual Version 2.0. 10.2172/811713

Brown, K.H., Voth, T.E., Glass, M.W., Gullerud, A.S., Heinstein, M., & Jones, R.E. (2003). ACME: Algorithms for Contact in a Multiphysics Environment API Version 1.3. 10.2172/811159

Drake, R.R., & Summers, R.M. (2003). An Exploration in Implementing Fault Tolerance in Scientific Simulation Application Software. 10.2172/811162

Brightwell, R.B., & Underwood, K.D. (2003). Evaluation of an eager protocol optimization for MPI [Conference]. https://www.osti.gov/biblio/924212

Riesen, R., Brightwell, R.B., & MacCabe, A.B. (2003). Measuring MPI latency variance [Conference]. https://www.osti.gov/biblio/924218

Thompson, A.P. (2003). Non-equilibrium molecular dynamics simulation of electroosmotic flow in a charged nanopore. Proposed for publication in the Journal of Chemical Physics.. 10.1063/1.1609194

Grest, G.S., Stevens, M.J., & Plimpton, S.J. (2003). Effect of end-tethered polymers on surface adhesion of glassy polymers. Proposed for publication in Journal Polymer Science, Part B - Polymer Physics.. https://www.osti.gov/biblio/924228

Brightwell, R.B., & MacCabe, A.B. (2003). An MPI tool to measure application sensitivity to variation in communication parameters [Conference]. https://www.osti.gov/biblio/924211

Adams, M.F. (2003). Applications of algebraic multigrid to large-scale finite element analysis of whole bone micro-mechanics on the IBM SP [Conference]. https://www.osti.gov/biblio/924222

Jennison, D., Schultz, P.A., & Sullivan, J.P. (2003). Evidence for interstitial hydrogen as the dominant electronic defect in nanometer alumina films. Proposed for publication in Physical Review B - Rapid Communications, May 2003.. https://www.osti.gov/biblio/924938

Crossno, P.J., Crossno, P.J., Rogers, D., & Brannon, R. (2003). Tensor visualization using Mohr's circles [Conference]. https://www.osti.gov/biblio/921123

Reutzel, A.L., Stubblefield, W.A., & Kleban, S. (2003). A collaborative knowledge management system for concurrent design and manufacturing [Conference]. https://www.osti.gov/biblio/921129

Moreland, K.D. (2003). The FFT on a GPU [Conference]. https://www.osti.gov/biblio/921120

Moreland, K.D., & Thompson, D. (2003). From cluster to wall with VTK [Conference]. https://www.osti.gov/biblio/921132

Voth, T.E., Christon, M., & Martinez, M. (2003). Generalized Fourier analyses of the advection-diffusion equation. Part I, one-dimensional domains. Proposed for publication in the International Journal for Numerical Methods in Fluids.. https://www.osti.gov/biblio/921732

Voth, T.E., Martinez, M., & Christon, M. (2003). Generalized Fourier analyses of the advection-diffusion equation. Part II, two-dimensional domains. Proposed for publication in the International Journal for Numerical Methods in Fluids.. https://www.osti.gov/biblio/921731

Laros, J.H., Ward, H.L., Dauchy, N.W., Vasak, J.S., Klundt, R.A., Laguna, G.A., Epperson, M., & Stearley, J. (2003). The Cluster Integration Toolkit (CIT) : an extensible, portable, scalable cluster management software implementation [Conference]. https://www.osti.gov/biblio/923559

Backer, A. (2003). Visual search : amnesic or undecided?. Proposed for publication in Nature.. https://www.osti.gov/biblio/923600

Backer, A. (2003). Asymmetric sliding-window cross-correlation. Proposed for publication in J Neurosci Methods.. https://www.osti.gov/biblio/923567

Backer, A. (2003). A simple formula to accurately subtract positivity of cytometric negative controls. Proposed for publication in Flow Cytometry.. https://www.osti.gov/biblio/923566

Reutzel, A.L., Stubblefield, W.A., & Kleban, S. (2003). GMS : preserving multiple expert voices in scientific knowledge management [Conference]. https://www.osti.gov/biblio/923579

Bochev, P.B. (2003). Analysis and computation of least-squares methods for a compressible Stokes problem. Proposed for publication in SIAM Journal of Numerical Analysis.. https://www.osti.gov/biblio/923568

Backer, A. (2003). The probability that a single underlying binomial distribution yields two given success proportions : a hypothesis test. Proposed for publication in JASA.. https://www.osti.gov/biblio/923557

Reutzel, A.L., Stubblefield, W.A., & Kleban, S. (2003). A collaborative knowledge management system for concurrent design and manufacturing [Conference]. https://www.osti.gov/biblio/923554

Stubblefield, W.A., Rogers, K.S., & Ingram, D.S. (2003). The LIGA Traveler : the use of technical and social invariants in software design [Conference]. https://www.osti.gov/biblio/923552

Hart, W.E., & Hart, W.E. (2003). Discrete sensor placement problems in distribution networks [Conference]. https://www.osti.gov/biblio/917476

Trucano, T.G. (2003). Statistical Validation of Engineering and Scientific Models: Validation Experiments to Application. 10.2172/809991

Strickland, J.H., Porter, V.L., & Homicz, G.F. (2003). Fluid-structure coupling for lightweight flexible bodies [Conference]. https://www.osti.gov/biblio/917120

Bunge, S., Boyle, T., Rodriguez, M.A., & Headley, T.J. (2003). Growth and morphology of cadmium chalcogenides : the synthesis of nanorods, tetrapods, and spheres from CdO and Cd(O[2]CCH[3])[2]. Proposed for publication in the Journal of Chemistry and Materials.. https://www.osti.gov/biblio/917445

Hart, W.E., & Phillips, C.A. (2003). Sensor placement in municipal water networks [Conference]. https://www.osti.gov/biblio/917487

Hart, W.E. (2003). An introduction to the COLIN optimization interface [Conference]. https://www.osti.gov/biblio/917455

Lehoucq, R. (2003). A comparison of algorithms for modal analysis in the absence of a sparse direct method. Proposed for publication in International Journal for Numerical Methods in Engineering, 2003; 1:1-21.. https://www.osti.gov/biblio/917490

Roy, C.J., Smith, T.M., & Ober, C.C. (2003). Verification of Euler / Navier-Stokes codes using the method of manufactured solutions. Proposed for publication in International Journal for Numerical Methods in Fluids.. https://www.osti.gov/biblio/920826

Churchwell, C.J., Rintoul, M.D., Martin, S., & Larson, R.S. (2003). The signature molecular descriptor. 3, Inverse quantitative structure-activity relationship of ICAM-1 inhibitory peptides. Proposed for publication in Journal Chem. Info. Compt. Sci. & Journal Molec. Graphics & Modeling.. https://www.osti.gov/biblio/920752

Hart, W.E. (2003). Discrete sensor placement problems in distribution networks [Conference]. https://www.osti.gov/biblio/1005072

Thompson, A.P. (2003). Molecular Dynamics Simulation of Polymer Dissolution. 10.2172/808631

Stewart, J. (2003). SIERRA Framework Version 3: Master Element Subsystem. 10.2172/809987

Forsythe, J.C., Bernard, M., Xavier, P.G., Abbott, R.G., Speed, A.E., & Brannon, N. (2003). Engineering a transformation of human-machine interaction to an augmented cognitive relationship [Conference]. https://www.osti.gov/biblio/917160

Brightwell, R.B., Camp, W.J., Cole, B., Debenedictis, E., Leland, R.W., & Tomkins, J.L. (2003). Architectural specification for massively parallel computers : an experience and measurement-based approach. Proposed for publication in the Special Issue of Concurrency and Computation: Practice and Experience - The High Performance Architectural Challenge: Mass Market Versus Proprietary Components.. https://www.osti.gov/biblio/917124

Bochev, P.B. (2003). Least -squares finite element methods for optimization and control problems for the Stokes equations. Proposed for publication in Journal of Computers and Mathematics with Applications.. https://www.osti.gov/biblio/917152

Grest, G.S., Landry, J.W., & Plimpton, S.J. (2003). Dimensionality effect on stress in granular packings. Proposed for publication in Powder Technology.. https://www.osti.gov/biblio/917125

Heffelfinger, G.S., Faulon, J.M., Frink, L.J., Haaland, D.M., Hart, W.E., Lane, T., Plimpton, S.J., Roe, D.C., Timlin, J.A., Martino, A., Rintoul, M.D., & Davidson, G.S. (2003). Carbon sequestration in Synechococcus Sp.: from molecular machines to hierarchical modeling. Proposed for publication in OMICS: A Journal of Integrative Biology, Vol. 6, No.4, 2002.. https://www.osti.gov/biblio/917491

Bunge, S., Boyle, T., Headley, T.J., Kotula, P.G., & Rodriguez, M.A. (2003). Verification, validation, and predictive capability in computational engineering and physics [Presentation]. 10.2172/918370

Riesen, R., & MacCabe, A.B. (2003). Simple, scalable protocols for high-performance local networks [Conference]. Proceedings - Conference on Local Computer Networks, LCN. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=46149102400&origin=inward

Robino, C.V., Hall, A., Brooks, J.A., Headley, T.J., & Roach, R.A. (2002). Solidification Diagnostics for Joining and Microstructural Simulations. 10.2172/808756

Gardner, T.J., McLaughlin, L.I., & Mowery-Evans, D.L. (2002). Computational Algorithms for Device-Circuit Coupling [Presentation]. 10.2172/808615

Romero, L., & Dickey, F.M. (2002). A Technique for Determining Non-Linear Circuit Parameters from Ring Down Data. 10.2172/808619

Ober, C.C., Smith, T.M., Payne, J.L., & Lorber, A. (2002). CFD simulations for arbitrary body motion [Conference]. https://www.osti.gov/biblio/889419

Brightwell, R.B., Riesen, R., & MacCabe, A.B. (2002). Design, implementation, and performance of MPI on portals 3.0. Proposed for publication in the International Journal of High Performance Computing Applications - Special Issue: Best Papers of EuroPVMMPI 2002.. https://www.osti.gov/biblio/913536

Brightwell, R.B., MacCabe, A.B., & Riesen, R. (2002). On the appropriateness of commodity operating systems for large-scale, balanced computing systems [Conference]. https://www.osti.gov/biblio/913524