Publications

Gray, G.A., Hough, P.D., Howle, V.E., Williams, P.J., & Williams, P.J. (2007). Cross-Cutting Technologies in Support of Nuclear Weapons Design and Analysis [Presentation]. https://www.osti.gov/biblio/1724558

Bartlett, R. (2007). FY07 ASC Vertical Integration Milestone Summary [Presentation]. https://www.osti.gov/biblio/1716662

Murphy, R.C. (2007). Building More Powerful Less Expensive Supercomputers Using Processing-In-Memory [Presentation]. https://www.osti.gov/biblio/1716663

Strip, D.R., Backus, G.A., & Backus, G.A. (2007). Architectural considerations for agent-based national scale policy models : LDRD final report. https://doi.org/10.2172/920446

Knupp, P. (2007). Demonstrating Code Verification Methods with Calore [Presentation]. https://www.osti.gov/biblio/1721401

Lehoucq, R.B. (2007). Dynamical systems and Iterative Eigensolvers [Conference]. https://www.osti.gov/biblio/1146674

Lehoucq, R.B., Bochev, P., & Bochev, P. (2007). On stabilized finite element for the Stokes problem in the small time step limit [Presentation]. https://www.osti.gov/biblio/1716675

von Lilienfeld-Toal, O., Schultz, P.A., & Schultz, P.A. (2007). Structure and band gaps of Ga-(V) semiconductors: The challenge of pseudopotentials. Physical Review B. https://www.osti.gov/biblio/1146636

Dornburg, C.C., Adams, S.S., Forsythe, J.C., Davidson, G.S., & Davidson, G.S. (2007). Massively parallel collaboration : a literature review. https://doi.org/10.2172/921124

Adams, S.S., Davidson, G.S., Dornburg, C.C., Forsythe, J.C., & Forsythe, J.C. (2007). Assessing the effectiveness of electronic brainstorming in an industrial setting : experimental design document. https://doi.org/10.2172/920462

Hart, W.E., Carr, R.D., Phillips, C.A., Watson, J., & Watson, J. (2007). LDRD final report : robust analysis of large-scale combinatorial applications. https://doi.org/10.2172/921748

Moreland, K., Chavez, E., Weirs, G., Brunner, T.A., Trucano, T.G., Karelitz, D.B., & Karelitz, D.B. (2007). Post-processing V&V level II ASC milestone (2360) results. https://doi.org/10.2172/933216

Bishop, J.E., Crawford, D.A., Edwards, H.C., & Edwards, H.C. (2007). An Overview of the New CTH-PRESTO Coupling for Modeling Blast Effects on Structures [Conference]. https://www.osti.gov/biblio/1146615

Moreland, K. (2007). Large Scale Visualization with ParaView 3 (Supercomputing Tutorial Handouts) [Presentation]. https://www.osti.gov/biblio/1719002

de Smet, D., Patel, K., Ho, C.K., Rohde, S., Rohrer, B.R., Okandan, M., Okandan, M., Spahn, O.B., & Spahn, O.B. (2007). LTCC in Microsystems [Conference]. https://www.osti.gov/biblio/1146943

Knupp, P. (2007). A Short Course on Mesh Quality [Conference]. https://www.osti.gov/biblio/1146609

Oldfield, R., Riesen, R., & Riesen, R. (2007). Modeling the Impact of Checkpoints on Next-Generation Systems [Conference]. https://www.osti.gov/biblio/1146802

Boman, E.G. (2007). Scientific Computing at Sandia: Trilinos and Zoltan [Conference]. https://www.osti.gov/biblio/1146501

Davidson, G.S., Dornburg, C.C., Adams, S.S., Hendrickson, S.M., Bauer, T.L., Forsythe, J.C., & Forsythe, J.C. (2007). Improving human effectiveness for extreme-scale problem solving : final report (assessing the effectiveness of electronic brainstorming in an industrial setting). https://doi.org/10.2172/922083

Gaudioso, J.M. (2007). Infectious Lifesciences Laboratory - A Hypothetical Facility for Case Studies [Conference]. https://www.osti.gov/biblio/1146621

Boman, E.G. (2007). Combinatorial Scientific Computing: Enabling Petascale Simulations [Conference]. https://www.osti.gov/biblio/1146788

Ismail, A.E., In 't Veld, P.J., Grest, G.S., & Grest, G.S. (2007). Surface Tension in Normal Alkanes. Molecular Physics, 105(23-24). https://doi.org/10.1080/00268970701779663

Davidson, G.S., Brown, W., & Brown, W. (2007). Interactomes to Biological Phase Space: a call to begin thinking at a new level in computational biology. https://doi.org/10.2172/1139978

Wills, A.E. (2007). LDRD 102610 final report new processes for innovative microsystems engineering with predictive simulation. https://doi.org/10.2172/913217

Moreland, K. (2007). Ultra-Scale Visualization: Research and Education [Conference]. https://www.osti.gov/biblio/1147497

Rupnow, K., Rodrigues, A., & Rodrigues, A. (2007). Using a Shadow Register File with Reconfigurable Functional Units [Conference]. https://www.osti.gov/biblio/1147586

Murphy, R.C. (2007). Initial Thoughts on Cortex Scale Supercomputer Simulation [Conference]. https://www.osti.gov/biblio/1147621

Siirola, J.D. (2007). Agent-oriented Software Engineering for Simulation and Optimization [Presentation]. https://www.osti.gov/biblio/1721532

DiMambro, J., Moore, D., Spencer, F.W., & Spencer, F.W. (2007). Investigating the Performance of Aged Fluorescent Penetrant Materials Phase II [Conference]. https://www.osti.gov/biblio/1147382

Edwards, H.C. (2007). An HPC Component for Parallel Heterogeneous and Dynamic Unstructured Meshes [Conference]. https://www.osti.gov/biblio/1147420

Tuminaro, R.S., Hu, J.J., & Hu, J.J. (2007). A New Smoothed Aggregation Multigrid Method for Anisotropic Problems. Journal of Computational Physics. https://www.osti.gov/biblio/1147337

Wylie, B.N., Wilson, A.T., Ice, L., Moreland, K., & Moreland, K. (2007). Intelligence Analysis Using Titan [Conference]. https://www.osti.gov/biblio/1147270

Joo, J., Plimpton, S.J., Martin, S., Swiler, L.P., Faulon, J.-L., & Faulon, J.-L. (2007). Sensitivity Analysis of NF-?B signaling network. The Annals of New York Academy of Sciences. https://www.osti.gov/biblio/1147524

Shadid, J.N. (2007). Stability of Operator Splitting Methods for Systems with Indefinite Operators: Advection-Diffusion-Reaction Systems. Journal of Computational Physics. https://www.osti.gov/biblio/1147316

Tuminaro, R.S., Schroder, J., & Schroder, J. (2007). Generalized Strength of Connection in Algebraic Multigrid [Presentation]. https://www.osti.gov/biblio/1721415

Bochev, P., Parks, M.L., & Parks, M.L. (2007). ON ATOMISTIC-TO-CONTINUUM (ATC) COUPLING BY BLENDING. Multiscale Modeling and Simulation. https://www.osti.gov/biblio/1147443

Bochev, P. (2007). Order verification - facts and fiction [Conference]. https://www.osti.gov/biblio/1147624

Brewer, M., Owen, S.J., & Owen, S.J. (2007). A Framework for Sizing Function Generation in Assembly Meshing [Conference]. https://www.osti.gov/biblio/1142125

Wolf, M. (2007). Partitioning for Parallel Sparse Matrix-Vector Multiplication [Presentation]. https://www.osti.gov/biblio/1721425

Hart, W.E., Berry, J., Phillips, C.A., Watson, J., & Watson, J. (2007). The Battle of the Water Sensor Networks (BWSN): A Design Challenge for Engineers and Algorithms. Journal of Water Resources, Planning and Management. https://www.osti.gov/biblio/1147317

van Bloemen Waanders, B.G. (2007). PDE Constrained Optimization Using Efficient High Level Abstraction-Based Simulation tools [Conference]. https://www.osti.gov/biblio/1147507

Vugrin, K.E.W., Roberts, R.M., Swiler, L.P., & Swiler, L.P. (2007). Confidence Region Estimation for Groundwater Parameter Identification Problems [Conference]. https://www.osti.gov/biblio/1147659

Webster, C. (2007). Analyzing Sparse-Grid UQ Techniques for Verification within Predictive Science [Presentation]. https://www.osti.gov/biblio/1721430

Banks, J.W. (2007). A Study of Detonation Propagation and Diffraction with Compliant Confinement. Combustion Theory and Modelling. https://www.osti.gov/biblio/1147449

McFadden, F., Romero, V., Swiler, L.P., & Swiler, L.P. (2007). Effective Robust Design Strategy employing Ordinal Variance Minimization and Adaptive Mean Constraint Satisfaction [Conference]. https://www.osti.gov/biblio/1147657

Murphy, R.C., Rodrigues, A., & Rodrigues, A. (2007). Building More Powerful Less Expensive Supercomputers Using Processing-In-Memory [Presentation]. https://www.osti.gov/biblio/1721460

Bochev, P., Parks, M.L., & Parks, M.L. (2007). Bridging methods for coupling atomistic and continuum models [Conference]. https://www.osti.gov/biblio/1147195

Tuminaro, R.S., Siefert, C., Bochev, P., & Bochev, P. (2007). Compatible Gauge Approaches for H(div) Equations [Presentation]. https://www.osti.gov/biblio/1721468

Robinson, A.C. (2007). Improving magnetic energy force discretization in ALEGRA [Conference]. https://www.osti.gov/biblio/1267151

In 't Veld, P.J., Ismail, A.E., Grest, G.S., & Grest, G.S. (2007). Application of Ewald summation to long-range dispersion forces [Conference]. https://doi.org/10.1063/1.2770730

Gaudioso, J.M., Aspelin, M., & Aspelin, M. (2007). Elements of Physical Security Systems II: Intrusion Detection Alarm Communication and Assessment Delay and Response [Conference]. https://www.osti.gov/biblio/1147340

Gaudioso, J.M. (2007). Risk Assessment as a Foundation for Physical Security [Conference]. https://www.osti.gov/biblio/1147379

Gaudioso, J.M., Aspelin, M., & Aspelin, M. (2007). Principles of Design for a Physical Security System for Bioscience Laboratories [Conference]. https://www.osti.gov/biblio/1147388

Gaudioso, J.M., Aspelin, M., & Aspelin, M. (2007). Elements of Physical Security Systems I: Access Controls [Conference]. https://www.osti.gov/biblio/1147241

Gaudioso, J.M. (2007). Risk Assessment as the Foundation for Laboratory Biosafety and Biosecurity [Conference]. https://www.osti.gov/biblio/1147564

Lehoucq, R.B., Silling, S.A., & Silling, S.A. (2007). Statistical Coarse-graining of Molecular Dynamics into Peridynamics. Physical Review Letters. https://www.osti.gov/biblio/1147406

Sale, K.L., Williams, P.J., Davidson, G.S., & Davidson, G.S. (2007). Datapipelining for Heterogeneous Data Fusion [Presentation]. https://www.osti.gov/biblio/1720348

Lehoucq, R.B., Silling, S.A., & Silling, S.A. (2007). Force Flux and the Peridynamic Stress Tensor [Presentation]. https://doi.org/10.1016/j.jmps.2007.08.004

Silling, S.A. (2007). A Non-Ordinary State-Based Peridynamic Method Using an Isotropic Elastic-Plastic Constitutive Model. International Journal of Solids and Structures. https://www.osti.gov/biblio/1147646

Swiler, L.P., Giunta, A.A., & Giunta, A.A. (2007). Aleatory and epistemic uncertainty quantification for engineering applications [Conference]. https://www.osti.gov/biblio/908070

Shadid, J.N. (2007). Efficient FUlly-coupled newton-Krylov Solution of Transport/Reaction Systems [Conference]. https://www.osti.gov/biblio/1147416

Shadid, J.N. (2007). Accuracy and Stability of Operator Splitting Methods Applied to Diffusion/Reaction and Convection/Diffusion/Reaction Systems with Indefinite Operators [Conference]. https://www.osti.gov/biblio/1147421

Romero, L., Mason, J.J., & Mason, J.J. (2007). Bifurcations in Non-Liinear Least Squares Optimization Problems. SIAM Journal of Optimization. https://www.osti.gov/biblio/1182950

Heroux, M.A. (2007). Improving the Development Process for CSE Software [Conference]. https://doi.org/10.1109/PDP.2007.51

Lehoucq, R.B., Bochev, P., & Bochev, P. (2007). Relating Atomistic-to-Continuum (AtC) Coupling and Domain Decomposition [Conference]. https://www.osti.gov/biblio/1141448

Shadid, J.N. (2007). Performance of AMG based Preconditioners for Fully-coupled Newton-Krylov Solution of Transport/Reaction Systems [Conference]. https://www.osti.gov/biblio/1147576

Shadid, J.N. (2007). An overview of the application of fully-coupled Newton-Krylov solution methods for FE simulation of transport/reaction systems [Conference]. https://www.osti.gov/biblio/1147239

Boman, E.G., Devine, K., & Devine, K. (2007). Tutorial: Partitioning Load Balancing and the Zoltan Toolkit [Conference]. https://www.osti.gov/biblio/1148185

Diegert, C. (2007). Visualization Sandbox Project is recognized as outstanding New Mexico small business technical assistance initiative activity [Presentation]. https://www.osti.gov/biblio/1721550

Oldfield, R. (2007). Scalable Storage System Security for MPP Applications [Conference]. https://www.osti.gov/biblio/1147387

Hart, W.E., Berry, J., Phillips, C.A., Watson, J., Riesen, L., & Riesen, L. (2007). SPOT: A Sensor Placement Optimization Toolkit for Drinking Water Contaminant Warning System Design [Conference]. https://www.osti.gov/biblio/1147328

Berry, J., Hart, W.E., & Hart, W.E. (2007). Morphing of Water Networks [Conference]. https://www.osti.gov/biblio/1147259

Hendrickson, B.A., Berry, J., & Berry, J. (2007). Multithreaded Algorithms for Processing Massive Graphs. Chapter in %22Petascale Computing: Algorithms and Applications%22. https://www.osti.gov/biblio/1147175

Thompson, A.P. (2007). LAMMPS Molecular Dynamics Simulations Used to Explain How Shock Waves Cause Structural Phase Transformation in Crystalline Solids [Presentation]. https://www.osti.gov/biblio/1721546

Borden, M., Brewer, M., & Brewer, M. (2007). Techniques for Robust Target-to-Source Imprinting for Decomposition of Many-to-Many Sweeping [Conference]. https://www.osti.gov/biblio/1147287

Parks, M.L. (2007). Analysis of Krylov Subspace Recycling for Sequences of Linear Systems [Conference]. https://www.osti.gov/biblio/1141355

Pawlowski, R., Banks, J.W., Shadid, J.N., & Shadid, J.N. (2007). A Fully-Implicit Finite Element Formulation for Plasma/Transport-Reaction and Resistive Magneto-Hydrodynamic Systems [Conference]. https://www.osti.gov/biblio/1147623

Lin, P.T., Shadid, J.N., Hoekstra, R.J., Hennigan, G., & Hennigan, G. (2007). Performance of Various Block Preconditioners for FEM Modeling of Semiconductor Devices [Conference]. https://www.osti.gov/biblio/1147376

Stewart, J., Collis, S.S., & Collis, S.S. (2007). Copy of Collaboration Opportunities with Sandia National Laboratories' Computer Science Research Institute (CSRI) [Conference]. https://www.osti.gov/biblio/1147373

Boman, E.G., Devine, K., & Devine, K. (2007). Enabling High Performance Computational Science through Combinatorial Algorithms. Journal of Physics: Conference Series. https://doi.org/10.1088/1742-6596/78/1/012058

Swiler, L.P., Giunta, A.A., & Giunta, A.A. (2007). Aleatory and Epistemic Uncertainty Quantification for Engineering Applications [Conference]. https://www.osti.gov/biblio/1147526

Romero, L., Mason, J.J., & Mason, J.J. (2007). Analysis and Extention of Bancroft's Method for Overdetermined TOA Geolocation Problems. SIAM Journal on Scientific Computing. https://www.osti.gov/biblio/1147966

Carr, R.D., Watson, J., & Watson, J. (2007). Finding (Good) Feasible Solutions for Large Resource-Allocation Problems [Presentation]. https://www.osti.gov/biblio/1721521

Riesen, R. (2007). Scalable Collection of Large MPI Traces on Red Storm [Conference]. https://www.osti.gov/biblio/1147292

Rohrer, B.R. (2007). Robust performance of autonomous robots in unstructured environments [Conference]. https://www.osti.gov/biblio/1147592

Boman, E.G., Leung, V.J., Riesen, L., & Riesen, L. (2007). Dynamic Load Balancing and Partitioning using the Zoltan Toolkit [Conference]. https://www.osti.gov/biblio/1147186

Moreland, K. (2007). Time Dependent Processing in a Parallel Pipeline Architecture (final) [Conference]. https://www.osti.gov/biblio/1147630

la Fratta, P.A. (2007). Architectural Extensions for Executing Floating Point Instruction Aggregates [Presentation]. https://www.osti.gov/biblio/1721515

Silling, S.A. (2007). Modeling hail impact damage and residual strength in composite structures [Conference]. https://www.osti.gov/biblio/1147869

Silling, S.A., Demmie, P.N., & Demmie, P.N. (2007). Peridynamic Simulation of High-Rate Material Failure [Conference]. https://www.osti.gov/biblio/1147983

Lehoucq, R.B., Parks, M.L., & Parks, M.L. (2007). Analysis of Atomistic-to-Continuum (AtC) Coupling Methods [Conference]. https://www.osti.gov/biblio/1147835

Caskey, S.A., Austin, P., Gaudioso, J.M., & Gaudioso, J.M. (2007). Small Group Exercises Training Seminar on Laboratory Biosecurity and Biosafety [Conference]. https://www.osti.gov/biblio/1148010

Rogers, D., Wilson, A.T., Rahal, N., & Rahal, N. (2007). ThreatView : [Conference]. https://www.osti.gov/biblio/1268183

Edwards, H.C. (2007). An HPC Component for Parallel Heterogeneous and Dynamic Unstructured Meshes [Conference]. https://www.osti.gov/biblio/1147987

Watson, J., Berry, J., Carr, R.D., & Carr, R.D. (2007). Abstracts for INFORMS Parallel Combinatorial Optimization Session [Conference]. https://www.osti.gov/biblio/1148244

Banks, J.W. (2007). Part I: An Overlapping Grid Implementation of Flux-Corrected-Transport Part II: Compliant Confinement in Shock Desensitized High Explosives [Presentation]. https://www.osti.gov/biblio/1722849

Underwood, K.D. (2007). Approaching the Exascale? Most aren't even ready for the petascale [Conference]. https://www.osti.gov/biblio/1147866

Watson, J., Strip, D.R., & Strip, D.R. (2007). Progressive Hedging Innovations for a Stochastic Spare Parts Support Enterprise Problem. Naval Research Logistics. https://www.osti.gov/biblio/1148109

Edwards, H.C. (2007). Geometric Proximity Search via Locality-Aware Hybrid Parallel Linear Oct-tree [Conference]. https://www.osti.gov/biblio/1148088

Owen, S.J., Clark, B.W., Melander, D., Brewer, M., Shepherd, J.F., & Shepherd, J.F. (2007). An Immersive Topology Environment for Meshing [Conference]. https://www.osti.gov/biblio/1148066