Publications

Edwards, H.C., Notz, P.K., & Notz, P.K. (2012). KokkosMesh: Designing data structures on top of KokkosArray [Conference]. https://www.osti.gov/biblio/1116263

Landahl, A.J. (2012). APS 4CS Adiabatic Quantum Computing [Conference]. https://www.osti.gov/biblio/1116334

McLendon, W., Chen, J., Kolla, H., & Kolla, H. (2012). On the use of Graph Search Techniques for the Analysis of Extreme-scale Combustion Simulation Data [Conference]. https://www.osti.gov/biblio/1072462

Jennings, C.A., Martin, M.R., Sefkow, A.B., Nakhleh, C., Robinson, A.C., Niederhaus, J.H.J., & Niederhaus, J.H.J. (2012). Code Verification of Magnetized Cylindrical Liner Implosions [Conference]. https://www.osti.gov/biblio/1141005

Magyar, R.J., Cochrane, K.R., & Cochrane, K.R. (2012). QMD Simulations to Develop EOS Models [Conference]. https://www.osti.gov/biblio/1116271

Rajamanickam, S., Boman, E.G., Heroux, M.A., Thornquist, H., & Thornquist, H. (2012). ShyLU: A Hybrid-Hybrid Solver [Conference]. https://www.osti.gov/biblio/1072647

Walsh, T., Ridzal, D., Young, J.G., & Young, J.G. (2012). Inverse Acoustic Source Identification in a Massively Parallel Finite Element Framework [Conference]. https://www.osti.gov/biblio/1116242

Oldfield, R. (2012). Integrating Analysis and Computation with Trios Services [Presentation]. https://www.osti.gov/biblio/1658271

Devine, K. (2012). Meshes Geometry and Load Balancing Capability Area [Conference]. https://www.osti.gov/biblio/1062758

Lehoucq, R.B. (2012). Analysis and approximation of nonlocal diffusion problems with volume constraints [Conference]. https://www.osti.gov/biblio/1062848

Hu, J.J. (2012). MueLu ? A Flexible Parallel Multigrid Framework [Presentation]. https://www.osti.gov/biblio/1648412

Shadid, J.N., Tuminaro, R.S., Pawlowski, R., Lin, P.T., & Lin, P.T. (2012). Block Preconditioning for Multi-physics: From Jacobi to Schur Complements [Conference]. https://www.osti.gov/biblio/1072495

Salinger, A.G. (2012). Albany [Presentation]. https://www.osti.gov/biblio/1648414

Salinger, A.G., Phipps, E.T., & Phipps, E.T. (2012). Numerical Bifurcation Methods and their Application to Fluid Dynamics: Analysis beyond Simulation. Proposed for publication in Communications in Computational Physics.. https://www.osti.gov/biblio/1062239

Spotz, W.F. (2012). Teuchos::MDArrays [Conference]. https://www.osti.gov/biblio/1062241

Spotz, W.F. (2012). User Experience Capability Area [Conference]. https://www.osti.gov/biblio/1062230

Boman, E.G., Devine, K., Leung, V.J., Rajamanickam, S., & Rajamanickam, S. (2012). Zoltan2: Next-Generation Combinatorial Toolkit [Conference]. https://www.osti.gov/biblio/1062842

Moreland, K. (2012). Flexible Analysis Software for Emerging Architectures (slides) [Presentation]. https://www.osti.gov/biblio/1648416

Willenbring, J.M. (2012). Trilinos Framework Update [Presentation]. https://www.osti.gov/biblio/1648424

Moreland, K. (2012). Dax for Multi- and Many-Core Architectures (SC12 Panel) [Presentation]. https://www.osti.gov/biblio/1648428

Wheeler, K.B., Stark, D., & Stark, D. (2012). Eureka! Task Teams! [Presentation]. https://www.osti.gov/biblio/1648429

Siirola, J.D., Watson, J., & Watson, J. (2012). Using Python and the Algebraic Modeling Language Pyomo to Specify Solve and Analyze Mathematical Programs [Presentation]. https://www.osti.gov/biblio/1648417

Parks, M.L. (2012). Computational Peridynamics [Presentation]. https://www.osti.gov/biblio/1648430

O'Hern, T.J., Shelden, B., Torczynski, J.R., Romero, L., & Romero, L. (2012). Bubble oscillations and motion under vibration. Physics of Fluids, 24(9), pp. 1-2. https://doi.org/10.1063/1.4747165

Phipps, E.T., Pawlowski, R., & Pawlowski, R. (2012). Efficient expression templates for operator overloading-based automatic differentiation [Conference]. Lecture Notes in Computational Science and Engineering. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84865567892&origin=inward

Heroux, M.A. (2012). Building the Next Generation of Parallel Applications & Libraries [Presentation]. https://www.osti.gov/biblio/1647947

Wills, A.E. (2012). A lithium projector augmented wave potential suitable for use in VASP at high compression and temperature. https://doi.org/10.2172/1055618

Parks, M.L., Bochev, P., & Bochev, P. (2012). Concurrent Coupling Techniques [Presentation]. https://www.osti.gov/biblio/1647948

Salinger, A.G. (2012). FASTMath Nonlinear Solvers and TIme Integration Tools [Conference]. https://www.osti.gov/biblio/1116432

Devine, K., Leung, V.J., Rajamanickam, S., & Rajamanickam, S. (2012). Data Partitioning for Scientific Applications and Emerging Architectures [Conference]. https://www.osti.gov/biblio/1116382

Trumbo, D., Warrender, C., Aimone, J.B., Teeter, C.M., Rothganger, F., & Rothganger, F. (2012). Neurons to Algorithms neural circuit model development platform [Conference]. https://www.osti.gov/biblio/1061129

Klise, K.A., Hart, W.E., Siirola, J.D., Phillips, C.A., McKenna, S.A., Hart, D., Berry, J., Watson, J., & Watson, J. (2012). Water security toolkit : [Conference]. https://www.osti.gov/biblio/1295398

Moreland, K., Miller, R.A., & Miller, R.A. (2012). Dax Design/First Example [Presentation]. https://www.osti.gov/biblio/1686317

Najm, H.N., Debusschere, B.J., Eldred, M., & Eldred, M. (2012). Quantification of Uncertainty in Extreme Scale Computations (QUEST) [Conference]. https://www.osti.gov/biblio/1073262

Davis, W.L. (2012). Using NoSQL Databases for Streaming Network Analysis [Conference]. https://www.osti.gov/biblio/1140954

Moreland, K. (2012). Large Scale Visualization with ParaView (SC12 slides) [Presentation]. https://www.osti.gov/biblio/1686320

Hemmert, K.S. (2012). Tyranny of Benchmarks. Past Present and Future Challenges in HPC [Presentation]. https://www.osti.gov/biblio/1647961

Ridzal, D., van Bloemen Waanders, B.G., & van Bloemen Waanders, B.G. (2012). A Trust-Region Algorithm with Adaptive Stochastic Collocation for PDE Optimization under Uncertainty. Proposed for publication in SIAM Journal on Scientific Computing (SISC).. https://www.osti.gov/biblio/1061199

Spotz, W.F., Collis, S.S., & Collis, S.S. (2012). High Order Finite Difference Methods for Forward and Inverse Acoustic Problems [Conference]. https://www.osti.gov/biblio/1061058

Spotz, W.F., Collis, S.S., & Collis, S.S. (2012). High Order Finite Difference Methods for Forward and Inverse Acoustic Problems [Conference]. https://www.osti.gov/biblio/1061091

Robbins, J., Voth, T.E., & Voth, T.E. (2012). Multi-resolution modeling of the dynamic loading of metal matrix composites. Proposed for publication in JOM.. https://www.osti.gov/biblio/1073308

Rajamanickam, S., Boman, E.G., & Boman, E.G. (2012). Parallel Partitioning with Zoltan: Is Hypergraph Partitioning Worth It? [Conference]. https://www.osti.gov/biblio/1073354

Fabian, N., Oldfield, R., & Oldfield, R. (2012). In-Situ Visualization with Catalyst [Conference]. https://www.osti.gov/biblio/1116421

Lofstead, G.F., Oldfield, R., & Oldfield, R. (2012). D2T: Doubly Distributed Transactions for High Performance and Distributed Computing [Conference]. https://www.osti.gov/biblio/1061224

Lofstead, G.F., Oldfield, R., & Oldfield, R. (2012). D2T: Doubly Distributed Transactions for High Performance and Distributed Computing [Conference]. https://www.osti.gov/biblio/1061046

Lofstead, G.F. (2012). Extending MPI to Better Support Multi-Application Interaction [Conference]. https://www.osti.gov/biblio/1061128

Bochev, P., Ridzal, D., & Ridzal, D. (2012). Optimization-Based Transport on the Sphere [Conference]. https://www.osti.gov/biblio/1073220

Moreland, K. (2012). Dax Code Sprint Tutorial [Presentation]. https://www.osti.gov/biblio/1647987

Witkowski, W., Rider, W., Trucano, T.G., & Trucano, T.G. (2012). Info-Gap Analysis of Numerical Truncation Errors [Conference]. https://www.osti.gov/biblio/1073420

Parks, M.L., Littlewood, D.J., Mitchell, J.A., Silling, S.A., & Silling, S.A. (2012). Peridigm users' guide. V1.0.0. https://doi.org/10.2172/1055619

Ray, J., van Bloemen Waanders, B.G., McKenna, S.A., & McKenna, S.A. (2012). Solving inverse problems with quantified uncertainty [Presentation]. https://www.osti.gov/biblio/1647768

Muller, R.P., Cygan, R.T., Deng, J., Frischknecht, A.L., Hewson, J.C., Moffat, H.K., Tenney, C.M., Schultz, P.A., Wagner, G.J., & Wagner, G.J. (2012). Modeling thermal abuse in transportation batteries. https://doi.org/10.2172/1055648

Landahl, A.J. (2012). UNM P&A Colloquium: Quantum Computer Heal Thyself! [Conference]. https://www.osti.gov/biblio/1116433

Wheeler, K.B., Stark, D., & Stark, D. (2012). A Strategy for Exascale Computing [Presentation]. https://www.osti.gov/biblio/1647986

Dalbey, K., Swiler, L.P., & Swiler, L.P. (2012). Gaussian Process Adaptive Importance Sampling (GPAIS). Proposed for publication in International Journal for Uncertainty Quantification.. https://www.osti.gov/biblio/1061226

Witkowski, W., Rider, W., Trucano, T.G., & Trucano, T.G. (2012). Info-Gap Analysis of Truncation Errors in Numerical Simulations [Conference]. https://www.osti.gov/biblio/1073359

Ang, J.A., Kelly, S.M., Hammond, S., Barrett, R.F., Levenhagen, M., Rodrigues, A., Pedretti, K., Laros, J.H., & Laros, J.H. (2012). Early Experiences with Intel MIC Architecture [Conference]. https://www.osti.gov/biblio/1061191

Whetzel, J.H., Cardona-Rivera, R., Bernstein, J.R.R., & Bernstein, J.R.R. (2012). Large-Scale Conflicts in Massively Multiplayer Online Games [Conference]. https://www.osti.gov/biblio/1116447

Whetzel, J.H., Forsythe, J.C., Haass, M.J., Glickman, M.R., & Glickman, M.R. (2012). A Data-Driven Approach to Assessing Team Performance through Team Communication [Conference]. https://www.osti.gov/biblio/1116428

Bochev, P., Ames, A., & Ames, A. (2012). An extended vector space model for information retrieval with generalized similarity measures : theory and applications. https://doi.org/10.2172/1055624

Carpenter, J.H., Wills, A.E., Rider, W., Debusschere, B.J., Robinson, A.C., Drake, R.R., & Drake, R.R. (2012). REPRESENTATION AND PROPAGATION OF UNCERTAINTY IN EQUATION-OF-STATE MODELS FOR SHOCK PHYSICS APPLICATIONS [Conference]. https://www.osti.gov/biblio/1116415

Stewart, J. (2012). A V&V/UQ Framework for Science-Based Predictions [Conference]. https://www.osti.gov/biblio/1116373

Romero, L., Webb, C.B., Mason, J.J., & Mason, J.J. (2012). Differential emitter geolocation. https://doi.org/10.2172/1055656

Littlewood, D.J., Boyce, B.L., & Boyce, B.L. (2012). Peridynamic Modeling of Localization in Ductile Metals [Conference]. https://www.osti.gov/biblio/1061111

Speed, A., Vineyard, C.M., Collard, J.M., Verzi, S.J., & Verzi, S.J. (2012). Diffusion among cognitively complex agents : final report. https://doi.org/10.2172/1055582

Parks, M.L., Littlewood, D.J., Mitchell, J.A., Silling, S.A., Lehoucq, R.B., & Lehoucq, R.B. (2012). Peridynamics for Material Failure [Presentation]. https://www.osti.gov/biblio/1648018

Stracuzzi, D.J. (2012). Combining deduction and abduction : toward an integrated theory of information processing. https://doi.org/10.2172/1055614

Moreland, K. (2012). Dax: Data Analysis at Extreme (Poster Intro Slides ASCR Exascale Conference Fall 2012) [Presentation]. https://www.osti.gov/biblio/1686340

Moreland, K. (2012). Dax: A Pervasively Parallel Framework for Data Analysis and Visualization [Presentation]. https://www.osti.gov/biblio/1658289

Carr, R.D. (2012). LDRD final report : combinatorial optimization with demands. https://doi.org/10.2172/1055603

Heroux, M.A. (2012). Riding the new commodity curves for scientific computing. Proposed for publication in SIAM News.. https://www.osti.gov/biblio/1061109

Shadid, J.N. (2012). Comments on Embedded UQ Tools [Conference]. https://www.osti.gov/biblio/1061178

Carpenter, J.H., Robinson, A.C., Debusschere, B.J., Drake, R.R., Wills, A.E., Rider, W., & Rider, W. (2012). Practical Uncertainty Propagation Through Hydrocodes For Complex Equation of State Models [Conference]. https://www.osti.gov/biblio/1116281

Knupp, P. (2012). A VU governance process applied to a Bison Fuel Rod Validation exercise. https://doi.org/10.2172/1055887

Topp, B., Ferreira, K.B., & Ferreira, K.B. (2012). Addressing Message-log Scalability for Extreme-scale Systems [Conference]. https://www.osti.gov/biblio/1060449

Wheeler, K.B. (2012). Flexible Preconditions: A Model for Efficient Macro-Dataflow Execution [Conference]. https://www.osti.gov/biblio/1060469

Silling, S.A. (2012). Discussion of ARL peridynamics report [Conference]. https://www.osti.gov/biblio/1060455

Hemmert, K.S. (2012). XGC Status Overview [Presentation]. https://www.osti.gov/biblio/1647791

Scovazzi, G., Hensinger, D.M., & Hensinger, D.M. (2012). Transient Dynamics Tetrahedral Computations: A New Variational Multiscale Approach [Presentation]. https://www.osti.gov/biblio/1658542

Rogers, D. (2012). Collaborating on Large Data Analysis [Presentation]. https://www.osti.gov/biblio/1647792

Phipps, E.T., Pawlowski, R., Salinger, A.G., & Salinger, A.G. (2012). Supporting Embedded Algorithms through Template-based Generic Programming [Conference]. https://www.osti.gov/biblio/1060472

Liu, Z., Safta, C., Sargsyan, K., van Bloemen Waanders, B.G., Debusschere, B.J., Najm, H.N., Bambha, R., & Bambha, R. (2012). Uncertainty Analysis and Bayesian Inference of Emissions and Transport from Urban Areas [Conference]. https://www.osti.gov/biblio/1073293

Valentin, M.A. (2012). Computational Solid Mechanics & Structural Dynamics The Scrum Software Development Process [Conference]. https://www.osti.gov/biblio/1060489

Muller, R.P., Lu, T., Tracy, L.A., Ten Eyck, G.A., Lilly, M.P., Carroll, M.S., Nielsen, E., Gao, X., Young, R.W., Salinger, A.G., Tezaur, I.K., Rahman, R., Bishop, N.C., Carr, S.M., & Carr, S.M. (2012). The QCAD Framework for Quantum Device Modeling [Conference]. https://www.osti.gov/biblio/1140638

Rahman, R. (2012). Interface enhanced spin-orbit splitting of single acceptors. Proposed for publication in Nature Physics.. https://www.osti.gov/biblio/1060491

Schultz, P.A. (2012). Defect reaction network in C-doped GaAs : numerical predictions. https://doi.org/10.2172/1059471

Pedretti, K. (2012). system-map.txt [Presentation]. https://www.osti.gov/biblio/1647803

Moreland, K. (2012). Dax Design/Removing Field Objects from Worklet Parameters [Presentation]. https://www.osti.gov/biblio/1686330

Littlewood, D.J. (2012). RKPM in Sierra/SolidMechanics [Presentation]. https://www.osti.gov/biblio/1647804

Schultz, P.A. (2012). Defect reaction network in Si-doped GaAs : numerical predictions. https://doi.org/10.2172/1051706

Wheeler, K.B. (2012). Flexible Preconditions - A Model for Efficient Macro-Dataflow Execution [Presentation]. https://www.osti.gov/biblio/1658468

Nguyen, K., Young, R.W., Nielsen, E., Rahman, R., Muller, R.P., Carroll, M.S., Lilly, M.P., Bishop, N.C., Tracy, L.A., Wendt, J.R., Grubbs, R., Pluym, T., Stevens, J., Dominguez, J., & Dominguez, J. (2012). Asymmetry in Charge Sensing for Silicon MOS Double Quantum Dot with Finite Bias [Conference]. https://www.osti.gov/biblio/1061180

Hopkins, M.M., Crozier, P., Hooper, R., Boerner, J., Musson, L.C., Bettencourt, M.T., & Bettencourt, M.T. (2012). 1D PIC-DSMC Simulations of Breakdown in Microscale Gaps [Conference]. https://www.osti.gov/biblio/1116613

Siirola, J.D. (2012). Calculating and Using Sensitivity Information During Derivative-Free Optimization Routines [Conference]. https://www.osti.gov/biblio/1073381

Young, J.G., Ridzal, D., & Ridzal, D. (2012). Software Abstractions for Matrix-Free PDE Optimization with Cone Constraints [Conference]. https://www.osti.gov/biblio/1061049

Carr, R.D., Phillips, C.A., & Phillips, C.A. (2012). Computing certificates for integer programs [Conference]. https://www.osti.gov/biblio/1073464

Rahman, R. (2012). Spin readout and addressability of phosphorus-donor-clusters in silicon. Nature Physics. https://www.osti.gov/biblio/1104782

Schultz, P.A., Moussa, J.E., & Moussa, J.E. (2012). Numerical integration of an electron exchange hole with a screened Coulomb interaction. Proposed for publication in Computer Physics Communications.. https://www.osti.gov/biblio/1061167

Shadid, J.N., Tuminaro, R.S., Pawlowski, R., & Pawlowski, R. (2012). A NEW APPROXIMATE BLOCK FACTORIZATION PRECONDITIONER FOR 2D INCOMPRESSIBLE (REDUCED) RESISTIVE MHD. Proposed for publication in SIAM Journal on Scientific Computing.. https://www.osti.gov/biblio/1073479

Ray, J., van Bloemen Waanders, B.G., McKenna, S.A., & McKenna, S.A. (2012). Estimation of Anthropogenic CO2 Emissions from Sparse Measurements [Presentation]. https://www.osti.gov/biblio/1647765