Publications

Rajamanickam, S., Devine, K., & Devine, K. (2013). Multi-jagged: A Scalable Multi-section based Spatial Partitioning Algorithm [Conference]. https://www.osti.gov/biblio/1082642

Phipps, E.T., Edwards, H.C., Hu, J.J., Ostien, J.T., & Ostien, J.T. (2013). Exploring Emerging Manycore Architectures for Uncertainty Quantification Through Embedded Stochastic Galerkin Methods [Conference]. https://www.osti.gov/biblio/1115474

Parks, M.L., Littlewood, D.J., Silling, S.A., & Silling, S.A. (2013). Peridigm: A New Paradigm in Computational Peridynamics [Presentation]. https://www.osti.gov/biblio/1661360

Lehoucq, R.B., Silling, S.A., & Silling, S.A. (2013). Peridynamic Balance Laws [Conference]. https://www.osti.gov/biblio/1082766

Lehoucq, R.B. (2013). Statistical mechanical foundation for the peridynamic nonlocal continuum theory: Energy and momentum conservation laws [Conference]. https://doi.org/10.1103/PhysRevE.84.031112

Ridzal, D., Young, J.G., & Young, J.G. (2013). Application of Second-Order Optimization Algorithms toInverse Problems in Nonlinear Elastostatics andCoupled Fluid Structure Interaction [Conference]. https://www.osti.gov/biblio/1083088

Silling, S.A., Littlewood, D.J., & Littlewood, D.J. (2013). Variable length scale in a peridynamic body [Conference]. https://www.osti.gov/biblio/1083082

Littlewood, D.J., Thomas, J.D., Shelton, T.R., & Shelton, T.R. (2013). Estimation of the Critical Time Step for Peridynamic Models [Conference]. https://www.osti.gov/biblio/1083090

Brightwell, R.B. (2013). Hobbes: Composition and Virtualization as the Foundations of an Extreme-Scale OS/R [Conference]. https://www.osti.gov/biblio/1083091

Hart, W.E., Campbell, A.N., & Campbell, A.N. (2013). Sandia's Data Science Research Challenge [Conference]. https://www.osti.gov/biblio/1083686

Heroux, M.A. (2013). Toward a new metric for ranking high performance computing systems. https://doi.org/10.2172/1089988

Young, J.G., Ridzal, D., & Ridzal, D. (2013). Designing experiments through compressed sensing. https://doi.org/10.2172/1089978

Hopkins, M.M., Boerner, J., Moore, C.H., Crozier, P., Campbell, R.B., Musson, L.C., Bettencourt, M.T., & Bettencourt, M.T. (2013). Accommodating Large Temporal Spatial and Particle Weighting Demands for Simulating Vacuum Arc Discharge [Conference]. https://www.osti.gov/biblio/1106697

Boman, E.G., Devine, K., Rajamanickam, S., & Rajamanickam, S. (2013). Scalable Matrix Computations on Large Scale-Free Graphs Using 2D Graph Partitioning [Conference]. https://doi.org/10.1145/2503210.2503293

Boman, E.G., Lehoucq, R.B., & Lehoucq, R.B. (2013). Preconditioning for Large Scale-Free Graphs [Conference]. https://www.osti.gov/biblio/1083653

Prokopenko, A., Hu, J.J., Tuminaro, R.S., & Tuminaro, R.S. (2013). Algebric Multigrid using Energy-Minimization in Parallel Setting [Conference]. https://www.osti.gov/biblio/1083709

Boman, E.G., Lehoucq, R.B., & Lehoucq, R.B. (2013). Preconditioners for Large Scale-Free Graphs [Conference]. https://www.osti.gov/biblio/1083675

Schultz, P.A. (2013). Off-center Tl and Na dopant centers in CsI. Journal of Physics: Condensed Matter. https://www.osti.gov/biblio/1083687

Tuminaro, R.S., Boman, E.G., Hu, J.J., Prokopenko, A., Siefert, C., Tsuji, P., & Tsuji, P. (2013). Toward Flexible Scalable Algebraic Multigrid Solvers [Conference]. https://www.osti.gov/biblio/1083708

Witzel, W., Young, K.C., & Young, K.C. (2013). Spin-bath noise correlation functions from quantum microscopic models. Physical Review Letters. https://www.osti.gov/biblio/1083693

Kelly, S.M., Rider, W., Barrett, R.F., Hammond, S., & Hammond, S. (2013). I Don't Wanna Grow Up...Stuck at Predictive Capability Maturity Model Level Zero [Conference]. https://www.osti.gov/biblio/1083699

Hart, W.E., Siirola, J.D., Watson, J., & Watson, J. (2013). Using Python and the Algebraic Modeling Language Pyomo to Specify Solve and Analyze Mathematical Programs [Conference]. https://www.osti.gov/biblio/1110661

Root, S., Magyar, R.J., Lemke, R.W., Mattsson, T., & Mattsson, T. (2013). Shock Compression of Cryogenic Noble Gas Mixtures: Krypton - Xenon [Conference]. https://www.osti.gov/biblio/1115534

Ridzal, D., Valentin, M.A., Young, J., & Young, J. (2013). Solving massive-scale inverse problems using matrix-fre dequential quadratic programming (SQP) methods [Conference]. https://www.osti.gov/biblio/1095564

Blume-Kohout, R.J. (2013). Debugging a running qubit [Conference]. https://www.osti.gov/biblio/1095565

Ferreira, K.B., Levy, S.L.N., Brightwell, R.B., & Brightwell, R.B. (2013). A Holistic Approach to Modeling and Simulation for Resilience and Power Configuration [Conference]. https://www.osti.gov/biblio/1111081

Wills, A.E. (2013). Achieving accuracy in first-principles calculations at extreme temperature and pressure [Conference]. https://www.osti.gov/biblio/1115468

Rider, W., Wills, A.E., & Wills, A.E. (2013). CFD Before CFD [Conference]. https://www.osti.gov/biblio/1115462

Wills, A.E. (2013). Enabling and Enhancing the Predictive Power of Science Based Engineering [Conference]. https://www.osti.gov/biblio/1115484

Boman, E.G. (2013). Randomized and Asynchronous Algorithms for Large Linear Systems [Conference]. https://www.osti.gov/biblio/1111320

Blume-Kohout, R.J., Young, K.C., Sarovar, M., & Sarovar, M. (2013). Error suppression and error correction in adiabatic quantum computation: Techniques and challenges. Physical Review X. https://www.osti.gov/biblio/1111406

Jones, K.R., Knox, H.A., van Bloemen Waanders, B.G., Ober, C.C., Romero, L., & Romero, L. (2013). Copy of Designing a continuous infrasound resonator source for fine scale sampling of atmospheric properties [Presentation]. https://www.osti.gov/biblio/1661756

Lin, P.T. (2013). PDE Solver Technologies to Enable High Fidelity Simulations with ASC codes [Presentation]. https://www.osti.gov/biblio/1661761

Boman, E.G. (2013). A Simple Efficient Preconditioner for Graph Laplacians [Conference]. https://www.osti.gov/biblio/1143886

Trott, C.R. (2013). Kokkos: Enabling performance portability across manycore architectures [Conference]. https://www.osti.gov/biblio/1143842

Grant, R., Brightwell, R.B., & Brightwell, R.B. (2013). Metrics for Evaluating Energy Saving Techniques for Resilient HPC Systems [Conference]. https://www.osti.gov/biblio/1143847

Willenbring, J.M. (2013). Supporting 64-bit global indices in Epetra and other Trilinos packages :. https://doi.org/10.2172/1092994

Willenbring, J.M., Heroux, M.A., & Heroux, M.A. (2013). Trilinos developers SQE guide :. https://doi.org/10.2172/1097202

Heinrichs, T.D., Taylor, M.A., & Taylor, M.A. (2013). Implemented "Vertically Lagrangian" Option in the Community Atmosphere Model [Presentation]. https://www.osti.gov/biblio/1661074

Silling, S.A. (2013). Variable length scale in a peridynamic continuum [Conference]. https://www.osti.gov/biblio/1078992

Leung, V.J. (2013). Task Mapping for Non-contiguous Allocations [Conference]. https://www.osti.gov/biblio/1079029

Curry, M.L., Ward, H.L., & Ward, H.L. (2013). Sirocco: A File System for Exascale [Presentation]. https://www.osti.gov/biblio/1661085

Siirola, J.D. (2013). Pairing Derivative-Free Optimization and Sensitivity Analysis Using a Hybrid Framework [Conference]. https://www.osti.gov/biblio/1079024

Taylor, M.A., Bambha, R., Parkes, M.V., Bonal, N., Slinkard, M.E., Mariner, P.E., Ingraham, M.D., Michelsen, H.A., Peterson, K., Lindblom, S.C., Draelos, T.J., Broome, S.T., Ballantine, M.D., Walck, M.C., Kuhlman, K.L., Ilgen, A.G., Fuller, T.J., Yoon, H., & Yoon, H. (2013). Geoscience Symposium Abstracts [Conference]. https://www.osti.gov/biblio/1079014

Stearley, J., Vandyke, J.P., Ferreira, K.B., Laros, J.H., & Laros, J.H. (2013). Investigating an API for resilient exascale computing. https://doi.org/10.2172/1096503

Ebeida, M., Mitchell, S.A., Knupp, P., & Knupp, P. (2013). Improving Spatial Coverage while Preserving Blue Noise [Conference]. https://www.osti.gov/biblio/1079021

Mitchell, S.A., Ebeida, M., & Ebeida, M. (2013). Balloon Darts: Estimating the Volume of the Union of d-Balls with Spoke Samples [Conference]. https://www.osti.gov/biblio/1079006

Berry, J., Dunlavy, D.M., Phillips, C.A., Robinson, D.G., & Robinson, D.G. (2013). Community Detection: A Bayesian Approach and the Challenge of Evaluation [Conference]. https://www.osti.gov/biblio/1079010

Suppona, R.A., Wilson, A.T., Doak, J.E., & Doak, J.E. (2013). Can we identify spear phishing targets before the email is sent? [Conference]. https://www.osti.gov/biblio/1115637

Swiler, L.P. (2013). Sensitivity analysis of the fission gas behavior model in BISON. https://doi.org/10.2172/1089870

Phipps, E.T., Hu, J.J., Edwards, H.C., & Edwards, H.C. (2013). Realizing Exascale Performance for Uncertainty Quantification [Conference]. https://www.osti.gov/biblio/1079546

Devine, K., Rajamanickam, S., Boman, E.G., & Boman, E.G. (2013). Combinatorial Scientific Computing for Exascale Systems and Applications [Conference]. https://www.osti.gov/biblio/1079542

Heroux, M.A. (2013). Toward Effective Parallel Programming: What We Need and Don't Need [Conference]. https://www.osti.gov/biblio/1079537

Hemmert, K.S., Barrett, B., Barrett, R.F., Lentine, A.L., Rodrigues, A., Denton-Hill, K.M., & Denton-Hill, K.M. (2013). Extreme-scale Computing Grand Challenge LDRD (XGC) [Presentation]. https://www.osti.gov/biblio/1661140

Muller, R.P., Nielsen, E., Gao, X., Young, R.W., Salinger, A.G., Tezaur, I.K., Carroll, M.S., & Carroll, M.S. (2013). The QCAD Framework for Quantum Device Modeling [Conference]. https://www.osti.gov/biblio/1079651

Schultz, P.A. (2013). MOdeling charged defects inside density functional theory band gaps: An improved inside-out perspective [Conference]. https://www.osti.gov/biblio/1079642

Oldfield, R. (2013). Trilinos I/O Support: Update [Presentation]. https://www.osti.gov/biblio/1661146

Oldfield, R., Moreland, K., Fabian, N., Rogers, D., & Rogers, D. (2013). Benefits and Challenges of Integration Simulation and Analysis [Presentation]. https://www.osti.gov/biblio/1661290

Shadid, J.N., Wildey, T., Pawlowski, R., Smith, T.M., & Smith, T.M. (2013). Error Estimation with Adjoints in Drekar: Applications to Fluid Flow and Magnetohydrodynamics Models [Presentation]. https://www.osti.gov/biblio/1661289

Barone, M., Arunajatesan, S., van Bloemen Waanders, B.G., Tezaur, I.K., & Tezaur, I.K. (2013). Construction of energy-stable Galerkin reduced order models. https://doi.org/10.2172/1088071

Weirs, G., Carnes, B., Hu, K., Orient, G., Romero, V., Swiler, L.P., & Swiler, L.P. (2013). Proposal for FY14 V&V Challenge Workshop [Conference]. https://www.osti.gov/biblio/1079791

Thompson, A.P., Trott, C.R., Swiler, L.P., Tucker, G.J., Foiles, S.M., Plimpton, S.J., & Plimpton, S.J. (2013). Quantum-Accurae LAMMPS SNAP Simulations on Petascale Platforms [Presentation]. https://www.osti.gov/biblio/1661293

Aimone, J.B. (2013). Large scale modeling of neurogenesis [Presentation]. https://www.osti.gov/biblio/1661292

Rintoul, M.D. (2013). PANTHER: Pattern ANalytics To support High-performance Exploitation and Reasoning [Presentation]. https://www.osti.gov/biblio/1661365

Klise, K.A., Siirola, J.D., & Siirola, J.D. (2013). Optimization Solvers for a Hydraulic Response to a Water Distribution System Contamination Event [Conference]. https://www.osti.gov/biblio/1079798

Weirs, G. (2013). Classification Systems for V&V Benchmark Data [Conference]. https://www.osti.gov/biblio/1145400

Bochev, P. (2013). Optimization-Based Modeling A new strategy for predictive simulations of multiscale multiphysics problems [Conference]. https://www.osti.gov/biblio/1080029

Ridzal, D. (2013). A matrix-free trust-region SQP method for equality constrained optimization. SIAM Journal on Optimization. https://www.osti.gov/biblio/1080019

Moreland, K. (2013). SDAV Meeting 2013-05-28 [Presentation]. https://www.osti.gov/biblio/1661297

Dalbey, K., Swiler, L.P., & Swiler, L.P. (2013). Gaussian Process Adaptive Importance Sampling. International Journal for Uncertainty Quantification. https://www.osti.gov/biblio/1080020

Jakeman, J.D. (2013). A Posteriori Error Analysis and Adaptive Construction of Surrogate Models [Conference]. https://www.osti.gov/biblio/1080030

Ridzal, D. (2013). Scalable Algorithms for Large-Scale Inversion and Design [Presentation]. https://www.osti.gov/biblio/1661300

Barrett, R.F., Vaughan, C.T., Hammond, S., & Hammond, S. (2013). Application Explorations for Future Interconnects [Conference]. https://www.osti.gov/biblio/1080202

Vineyard, C.M. (2013). Quantifying the effects of neurogenesis - from information theory to CA3 modeling [Presentation]. https://www.osti.gov/biblio/1661317

Siirola, J.D. (2013). Using Hybrid Techniques to Perform Sensitivity Analysis During the Calibration Process [Conference]. https://www.osti.gov/biblio/1080205

Ebeida, M., Mitchell, S.A., & Mitchell, S.A. (2013). Advancing Front for Efficient Blue Noise Sampling Across Various Dimensions [Conference]. https://www.osti.gov/biblio/1080203

Brightwell, R.B. (2013). A System So*ware Approach for Unifying Simula8on and Analysis at Extreme--Scale [Presentation]. https://www.osti.gov/biblio/1661323

Ferreira, K.B. (2013). Checkpoint Compression: Its Limits and a Comparison with other Optimizations [Conference]. https://www.osti.gov/biblio/1080332

Young, C.J., Heck, S., Eckert, R., Carr, D.B., & Carr, D.B. (2013). Extending waveform correlation techniques to broad regional monitoring using IMS data [Conference]. https://www.osti.gov/biblio/1296808

Gao, X., Mamaluy, D., Nielsen, E., Muller, R.P., Young, R.W., Bishop, N.C., Lilly, M.P., Carroll, M.S., & Carroll, M.S. (2013). Efficient Self-Consistent Quantum Transport Simulator for Quantum Well Devices [Conference]. https://www.osti.gov/biblio/1080393

Grant, R. (2013). High Performanace Computing-The Challenge at Exascale [Conference]. https://www.osti.gov/biblio/1083660

Aimone, J.B., Warrender, C., Trumbo, D., & Trumbo, D. (2013). Neurons to Algorithms (N2A) [Presentation]. https://www.osti.gov/biblio/1661339

Cyr, E.C., Shadid, J.N., & Shadid, J.N. (2013). Adjoint Based a posteriori Error Estimates Using Data Compression [Conference]. https://www.osti.gov/biblio/1081510

Brightwell, R.B. (2013). XPRESS Project Update [Conference]. https://www.osti.gov/biblio/1072474

Grant, R., Barrett, B., Brightwell, R.B., & Brightwell, R.B. (2013). Protocols for Fully Offloaded Collective Operations on Accelerated Network Adapters [Conference]. https://www.osti.gov/biblio/1072473

Brightwell, R.B., Oldfield, R., & Oldfield, R. (2013). Composition and Virtualization as the Foundations of an Extreme-scale OS/R [Conference]. https://www.osti.gov/biblio/1072602

Romero, V., Swiler, L.P., Urbina, A., & Urbina, A. (2013). A Comparison of Methods for Representing and Aggregating Uncertainties involving Sparsely Sampled Random Variables - Final Results [Conference]. https://www.osti.gov/biblio/1073212

Romero, V., Swiler, L.P., Urbina, A., & Urbina, A. (2013). A Comparison of Methods for Representing and Aggregating Uncertainties involving Sparsely Sampled Random Variables - Final Results [Conference]. https://www.osti.gov/biblio/1115997

Cadena, D.A. (2013). The Salishan Conference on High Speed Computing [Conference]. https://www.osti.gov/biblio/1073263

Carpenter, J.H., Belcourt, K., & Belcourt, K. (2013). Tabular water properties interface for Hydra-TH :. https://doi.org/10.2172/1095929

Shan, T., Thompson, A.P., Wills, A.E., & Wills, A.E. (2013). Atomistic Simulation of Orientation Dependence in Shock-induced Initiation of Pentaerythritol Tetranitrate (PETN) [Conference]. https://www.osti.gov/biblio/1115991

Perego, M., Eldred, M., Salinger, A.G., Tezaur, I.K., & Tezaur, I.K. (2013). FELIX: advances in modeling forward and inverse icesheet problems [Conference]. https://www.osti.gov/biblio/1073162

Jakeman, J.D. (2013). High-dimensional sparse grid interpolation and quadrature using one-dimensional Leja quadrature rules [Conference]. https://www.osti.gov/biblio/1073318

Jacobson, N.T. (2013). Solving PDE-constrained combinatorial optimization problems with AQO [Presentation]. https://www.osti.gov/biblio/1658803

Nguyen, K., Stevens, J.E., Grubbs, R., Pluym, T., Dominguez, J., Young, R.W., Muller, R.P., Nielsen, E., Jacobson, N.T., Lilly, M.P., Carroll, M.S., Bishop, N.C., Tracy, L.A., Carr, S.M., Lu, T., Wendt, J.R., & Wendt, J.R. (2013). Pulsed Electron Transition Measurements in a Silicon Double Quantum Dot [Presentation]. https://www.osti.gov/biblio/1659007

Littlewood, D.J. (2013). Modeling Thermal Strains with Peridynamics [Presentation]. https://www.osti.gov/biblio/1659008

Barrett, B. (2013). Remote Memory Access Programming in MPI-3. ACM Transactions on Parallel Computing. https://www.osti.gov/biblio/1078505

Ray, J., Lee, J., Lefantzi, S., van Bloemen Waanders, B.G., & van Bloemen Waanders, B.G. (2013). A multiresolution spatial parametrization for the estimation of fossil-fuel carbon dioxide emissions via atmospheric inversions. https://doi.org/10.2172/1095955

Grant, R., Barrett, B., Brightwell, R.B., & Brightwell, R.B. (2013). Protocols for Fully Offloaded Collective Operations on Accelerated Network Adapters [Conference]. https://www.osti.gov/biblio/1078462

Heroux, M.A. (2013). Toward Resilient Algorithms and Applications [Conference]. https://doi.org/10.1145/2465813.2465814