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Decrease time-to-solution through improved linear-system setup and solve

Hu, Jonathan J.; Thomas, Stephen T.; Dohrmann, Clark R.; Ananthan, Shreyas A.; Domino, Stefan P.; Williams, Alan B.; Sprague, Michael S.

The goal of the ExaWind project is to enable predictive simulations of wind farms composed of many MW-scale turbines situated in complex terrain. Predictive simulations will require computational fluid dynamics (CFD) simulations for which the mesh resolves the geometry of the turbines, and captures the rotation and large deflections of blades. Whereas such simulations for a single turbine are arguably petascale class, multi-turbine wind farm simulations will require exascale-class resources. The primary code in the ExaWind project is Nalu, which is an unstructured-grid solver for the acoustically-incompressible Navier-Stokes equations, and mass continuity is maintained through pressure projection. The model consists of the mass-continuity Poisson-type equation for pressure and a momentum equation for the velocity. For such modeling approaches, simulation times are dominated by linear-system setup and solution for the continuity and momentum systems. For the ExaWind challenge problem, the moving meshes greatly affect overall solver costs as re-initialization of matrices and re-computation of preconditioners is required at every time step We describe in this report our efforts to decrease the setup and solution time for the mass-continuity Poisson system with respect to the benchmark timing results reported in FY18 Q1. In particular, we investigate improving and evaluating two types of algebraic multigrid (AMG) preconditioners: Classical Ruge-Stfiben AMG (C-AMG) and smoothed-aggregation AMG (SA-AMG), which are implemented in the Hypre and Trilinos/MueLu software stacks, respectively. Preconditioner performance was optimized through existing capabilities and settings.

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Decrease time-to-solution through improved linear-system setup and solve

Hu, Jonathan J.; Thomas, Stephen T.; Dohrmann, Clark R.; Ananthan, Shreyas A.; Domino, Stefan P.; Williams, Alan B.; Sprague, Michael S.

The goal of the ExaWind project is to enable predictive simulations of wind farms composed of many MW-scale turbines situated in complex terrain. Predictive simulations will require computational fluid dynamics (CFD) simulations for which the mesh resolves the geometry of the turbines, and captures the rotation and large deflections of blades. Whereas such simulations for a single turbine are arguably petascale class, multi-turbine wind farm simulations will require exascale-class resources.

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Multifidelity uncertainty quantification using spectral stochastic discrepancy models

Handbook of Uncertainty Quantification

Eldred, Michael S.; Ng, Leo W.T.; Barone, Matthew F.; Domino, Stefan P.

When faced with a restrictive evaluation budget that is typical of today's highfidelity simulation models, the effective exploitation of lower-fidelity alternatives within the uncertainty quantification (UQ) process becomes critically important. Herein, we explore the use of multifidelity modeling within UQ, for which we rigorously combine information from multiple simulation-based models within a hierarchy of fidelity, in seeking accurate high-fidelity statistics at lower computational cost. Motivated by correction functions that enable the provable convergence of a multifidelity optimization approach to an optimal high-fidelity point solution, we extend these ideas to discrepancy modeling within a stochastic domain and seek convergence of a multifidelity uncertainty quantification process to globally integrated high-fidelity statistics. For constructing stochastic models of both the low-fidelity model and the model discrepancy, we employ stochastic expansion methods (non-intrusive polynomial chaos and stochastic collocation) computed by integration/interpolation on structured sparse grids or regularized regression on unstructured grids. We seek to employ a coarsely resolved grid for the discrepancy in combination with a more finely resolved Sandia National Laboratories is a multi-program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the US Department of Energy's National Nuclear Security Administration under contract DE-AC04-94AL85000. Grid for the low-fidelity model. The resolutions of these grids may be defined statically or determined through uniform and adaptive refinement processes. Adaptive refinement is particularly attractive, as it has the ability to preferentially target stochastic regions where the model discrepancy becomes more complex, i.e., where the predictive capabilities of the low-fidelity model start to break down and greater reliance on the high-fidelity model (via the discrepancy) is necessary. These adaptive refinement processes can either be performed separately for the different grids or within a coordinated multifidelity algorithm. In particular, we present an adaptive greedy multifidelity approach in which we extend the generalized sparse grid concept to consider candidate index set refinements drawn from multiple sparse grids, as governed by induced changes in the statistical quantities of interest and normalized by relative computational cost. Through a series of numerical experiments using statically defined sparse grids, adaptive multifidelity sparse grids, and multifidelity compressed sensing, we demonstrate that the multifidelity UQ process converges more rapidly than a single-fidelity UQ in cases where the variance of the discrepancy is reduced relative to the variance of the high-fidelity model (resulting in reductions in initial stochastic error), where the spectrum of the expansion coefficients of the model discrepancy decays more rapidly than that of the high-fidelity model (resulting in accelerated convergence rates), and/or where the discrepancy is more sparse than the high-fidelity model (requiring the recovery of fewer significant terms).

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Towards extreme-scale simulations for low mach fluids with second-generation trilinos

Parallel Processing Letters

Lin, Paul L.; Bettencourt, Matthew T.; Domino, Stefan P.; Fisher, Travis C.; Hoemmen, Mark F.; Hu, Jonathan J.; Phipps, Eric T.; Prokopenko, Andrey V.; Rajamanickam, Sivasankaran R.; Siefert, Christopher S.; Kennon, Stephen

Trilinos is an object-oriented software framework for the solution of large-scale, complex multi-physics engineering and scientific problems. While Trilinos was originally designed for scalable solutions of large problems, the fidelity needed by many simulations is significantly greater than what one could have envisioned two decades ago. When problem sizes exceed a billion elements even scalable applications and solver stacks require a complete revision. The second-generation Trilinos employs C++ templates in order to solve arbitrarily large problems. We present a case study of the integration of Trilinos with a low Mach fluids engineering application (SIERRA low Mach module/Nalu). Through the use of improved algorithms and better software engineering practices, we demonstrate good weak scaling for up to a nine billion element large eddy simulation (LES) problem on unstructured meshes with a 27 billion row matrix on 524,288 cores of an IBM Blue Gene/Q platform.

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Mesoscale to plant-scale models of nuclear waste reprocessing

Rao, Rekha R.; Pawlowski, Roger P.; Brotherton, Christopher M.; Cipiti, Benjamin B.; Domino, Stefan P.; Jove Colon, Carlos F.; Moffat, Harry K.; Nemer, Martin N.; Noble, David R.; O'Hern, Timothy J.

Imported oil exacerabates our trade deficit and funds anti-American regimes. Nuclear Energy (NE) is a demonstrated technology with high efficiency. NE's two biggest political detriments are possible accidents and nuclear waste disposal. For NE policy, proliferation is the biggest obstacle. Nuclear waste can be reduced through reprocessing, where fuel rods are separated into various streams, some of which can be reused in reactors. Current process developed in the 1950s is dirty and expensive, U/Pu separation is the most critical. Fuel rods are sheared and dissolved in acid to extract fissile material in a centrifugal contactor. Plants have many contacts in series with other separations. We have taken a science and simulation-based approach to develop a modern reprocessing plant. Models of reprocessing plants are needed to support nuclear materials accountancy, nonproliferation, plant design, and plant scale-up.

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Highly scalable linear solvers on thousands of processors

Siefert, Christopher S.; Tuminaro, Raymond S.; Domino, Stefan P.; Robinson, Allen C.

In this report we summarize research into new parallel algebraic multigrid (AMG) methods. We first provide a introduction to parallel AMG. We then discuss our research in parallel AMG algorithms for very large scale platforms. We detail significant improvements in the AMG setup phase to a matrix-matrix multiplication kernel. We present a smoothed aggregation AMG algorithm with fewer communication synchronization points, and discuss its links to domain decomposition methods. Finally, we discuss a multigrid smoothing technique that utilizes two message passing layers for use on multicore processors.

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15 Results
15 Results