Publications

Glusa, C., Ainsworth, M., & Ainsworth, M. (2018). The Resiliency of Multilevel Methods on Next Generation Computing Platforms: Probabilistic Model and Its Analysis [Conference Poster]. https://www.osti.gov/biblio/1573773

Stein, E., Swiler, L.P., & Swiler, L.P. (2018). Dakota applied to GRS mc4096 dataset [Presentation]. https://www.osti.gov/biblio/1806476

Moore, S.G. (2018). LAMMPS ReaxFF Benchmark Deep Dive [Presentation]. https://www.osti.gov/biblio/1806475

Peterson, K., Parks, M.L., Ackerman, E., Bambha, R., Bull, D.L., Frederick, J.M., Hardesty, J., Ilgen, A.G., Jakeman, J.D., Powell, A.J., Peterson, M.G., Roesler, E.L., Safta, C., Stracuzzi, D.J., Tezaur, I.K., & Tezaur, I.K. (2018). Arctic Tipping Points Triggering Global Change [Conference Poster]. https://www.osti.gov/biblio/1513640

Gorodetsky, A., Geraci, G., Eldred, M., Jakeman, J.D., & Jakeman, J.D. (2018). Multifidelity Model Management using Latent Variable Bayesian Networks [Conference Poster]. https://www.osti.gov/biblio/1513639

Crossno, P.J., Gittinger, J., Hunt, W.L., Letter, M., Martin, S., Sielicki, M., & Sielicki, M. (2018). Slycat™ User Manual. https://doi.org/10.2172/1418737

Moreland, K. (2018). Using VTK-m (ECP tutorial) [Presentation]. https://www.osti.gov/biblio/1513492

Moreland, K. (2018). Data Analysis and Visualization Mini-Symposium: VTK-m [Presentation]. https://www.osti.gov/biblio/1513491

Moreland, K. (2018). VTK-m User's Guide (Version 1.1). https://www.osti.gov/biblio/1480405

Eldred, M., Geraci, G., Gorodetsky, A., Jakeman, J.D., & Jakeman, J.D. (2018). Multilevel-multifidelity approaches for forward uq in the DARPA SEQUOIA project [Conference Poster]. AIAA Non-Deterministic Approaches Conference, 2018. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85141580005&origin=inward

Bachman, W.B., Bachman, W.B., & Bachman, W.B. (2018). Vanguard Pre-bid Conference [Conference Poster]. https://www.osti.gov/biblio/1513177

Hammond, S., Rodrigues, A., Hemmert, K.S., Voskuilen, G.R., Hughes, C., Levenhagen, M., Hoekstra, R.J., Ang, J.A., & Ang, J.A. (2018). Towards a Scalable Integrated Simulation Framework for Extreme Heterogeneity in High Performance Computing [Conference Poster]. https://www.osti.gov/biblio/1513452

Oldfield, R., Ulmer, C.D., Widener, P., Ward, H.L., & Ward, H.L. (2018). SPARC: Demonstrate burst-buffer-based checkpoint/restart on ATS-1. https://doi.org/10.2172/1417577

Rajamanickam, S., Kim, K., Deveci, M., Trott, C.R., & Trott, C.R. (2018). Kokkoskernels: Portable Math and Graph Kernels [Conference Poster]. https://www.osti.gov/biblio/1513447

Moreland, K., Otahal, T.J., Newton, B.D., Mauldin, J.A., & Mauldin, J.A. (2018). Scalable Visualization for ATDM at SNL [Presentation]. https://www.osti.gov/biblio/1513449

Thornquist, H., Mei, T., Rajamanickam, S., Ellingwood, N.D., & Ellingwood, N.D. (2018). Using the Basker Linear Solvers in Xyce [Conference Poster]. https://www.osti.gov/biblio/1491763

Kouri, D.P., Ridzal, D., & Ridzal, D. (2018). Inexact Trust-Region Methods for PDE-Constrained Optimization. https://www.osti.gov/biblio/1434233

Bachman, W.B., Bignell, J., Dingreville, R.P.M., Zepper, E.T., Brien, M.J.'., Busch, R.D., Skinner, C.M., & Skinner, C.M. (2018). NSRD-15:Computational Capability to Substantiate DOE-HDBK-3010 Data. https://doi.org/10.2172/1417872

Safta, C., Huan, X., Geraci, G., Eldred, M., Sargsyan, K., Vane, Z.P., Oefelein, J., Najm, H.N., & Najm, H.N. (2018). Multifidelity Statistical Analysis of Large Eddy Simulations in Scramjet Computations [Conference Poster]. https://www.osti.gov/biblio/1513486

Younge, A.J., Bachman, W.B., Grant, R., Brightwell, R.B., & Brightwell, R.B. (2017). A Tale of Two Systems: Using Containers to Deploy HPC Applications on Supercomputers and Clouds [Conference Poster]. Proceedings of the International Conference on Cloud Computing Technology and Science, CloudCom. https://doi.org/10.1109/CloudCom.2017.40

Watson, J., Woodruff, D.L., Deride Silva, J.A., Slevogt, G., Silva-Monroy, C., & Silva-Monroy, C. (2017). Constructing probabilistic scenarios for wide-area solar power generation. Solar Energy, 160, pp. 1-40. https://doi.org/10.1016/j.solener.2017.11.067

Nicholson, B.L., Siirola, J.D., Watson, J., Zavala, V.M., Biegler, L.T., & Biegler, L.T. (2017). pyomo.dae: a modeling and automatic discretization framework for optimization with differential and algebraic equations. Mathematical Programming Computation, 10(2), pp. 187-223. https://doi.org/10.1007/s12532-017-0127-0

Kouri, D.P. (2017). A Measure Approximation for Distributionally Robust PDE-Constrained Optimization Problems. SIAM Journal on Numerical Analysis, 55(6), pp. 3147-3172. https://doi.org/10.1137/15M1036944

Cangi, A., Baldsiefen, T., Eich, F.G., Gross, E.K.U., & Gross, E.K.U. (2017). Exchange-correlation approximations for reduced-density-matrix-functional theory at finite temperature: Capturing magnetic phase transitions in the homogeneous electron gas. Physical Review A, 96(6). https://doi.org/10.1103/PhysRevA.96.062508

Reu, P.L., Toussaint, E., Bruck, H.A., Iadicola, M., Balcaen, R., Turner, D.Z., Siebert, T., Lava, P., Simonsen, M., mc Jones, E., & mc Jones, E. (2017). DIC Challenge: Developing Images and Guidelines for Evaluating Accuracy and Resolution of 2D Analyses. Experimental Mechanics, 58, pp. 1-1067. https://doi.org/10.1007/s11340-017-0349-0

Koski, J.P., Moore, S.G., Grest, G.S., Siska, S.M., & Siska, S.M. (2017). Effect of an external field on capillary waves in a dipolar fluid. Physical Review E, 96(6). https://doi.org/10.1103/PhysRevE.96.063106

Klise, K.A., Laird, C., Nicholson, B.L., Parrott, L.K., & Parrott, L.K. (2017). Optimization of Fugitive Emissions Sensor Networks [Presentation]. https://www.osti.gov/biblio/1485513

Bettencourt, M.T., Brown, D., Radtke, G.A., & Radtke, G.A. (2017). High Order Unstructured Particle in Cell Methods [Conference Poster]. https://www.osti.gov/biblio/1485331

Prokopenko, A., Tuminaro, R.S., & Tuminaro, R.S. (2017). An algebraic multigrid method for Q2−Q1 mixed discretizations of the Navier–Stokes equations. Numerical Linear Algebra with Applications, 24(6). https://doi.org/10.1002/nla.2109

Bettencourt, M.T., Zinser, B.F., Jorgenson, R.E., Kotulski, J.D., & Kotulski, J.D. (2017). Preconditioner for Boundary Integral Methods on Next Generation Platforms [Conference Poster]. https://www.osti.gov/biblio/1485330

Schultz, P.A., Edwards, A.H., van Ginhoven, R.M., Pineda, A.C., & Pineda, A.C. (2017). From narrow gap to ultra-wide band gap systems: End of band gap problem excuses for defect calculations [Conference Poster]. https://www.osti.gov/biblio/1485048

Moreland, K. (2017). ECP Milestone Highlights WBS 2.3.4.13 ECP/VTK-m FY18Q1 [MS-18/01-03] Multiblock / Gradients / Release STDA05-5 [Presentation]. https://www.osti.gov/biblio/1486997

Kouri, D.P. (2017). Risk-Averse Optimization of Large-Scale Multiphysics Systems [Conference Poster]. https://www.osti.gov/biblio/1487004

Moore, C.H., Bettencourt, M.T., & Bettencourt, M.T. (2017). EMPIRE collisions [Presentation]. https://www.osti.gov/biblio/1511972

Hoffman, M.J., Wachtel, A., Gauthier, J.H., Munoz-Ramos, K., Turnley, J.G., Nelson, A.M., Speed, A., Lawton, C., Kittinger, R., & Kittinger, R. (2017). Modeling Human-Technology Interactive Effects in Systems of Systems (SoS) [Conference Poster]. https://www.osti.gov/biblio/1486991

Plimpton, S.J. (2017). Large-Scale DSMC Simulations ... Part 2: Computational aspects [PowerPoint] [Presentation]. https://www.osti.gov/biblio/1485717

Glusa, C., Ainsworth, M., & Ainsworth, M. (2017). Adaptive FEM for the fractional Laplacian [Conference Poster]. https://www.osti.gov/biblio/1511974

Maupin, K.A., Oden, J.T., & Oden, J.T. (2017). Adaptive selection and validation of models of complex systems in the presence of uncertainty. Research in Mathematical Sciences, 4(1), pp. 1-21. https://doi.org/10.1186/s40687-017-0104-2

Moon, C., Mitchell, S.A., Callor, N., Dewers, T., Heath, J.E., Yoon, H., Conner, G.R., & Conner, G.R. (2017). Persistent Homology fingerprinting of microstructural controls on larger-scale fluid flow in porous media [Conference Poster]. https://www.osti.gov/biblio/1485718

Wilke, J., Trott, C.R., Edwards, H.C., Glass, M.W., Clay, R.L., & Clay, R.L. (2017). December 2017 ECP ST Project Review ECP Project WBS 2.3.1.04 : SNL ATDM PMR [Presentation]. https://www.osti.gov/biblio/1489047

Brightwell, R.B. (2017). December 2017 ECP ST Project Review: ECP Project WBS 2.3.5.04 (SNL ATDM Software Ecosystem). https://doi.org/10.2172/1415115

Matteo, E.N., Dewers, T., Fuller, T.J., Jove-Colon, C.F., Mohagheghi, J.R., Stormont, J.C., Taha, M.R., Kipper, J., Chapman, D., & Chapman, D. (2017). Monitoring and Repair of Damaged Cement-Geomaterial Interfaces in High Pressure High Temperature Repository and Borehole Scenarios [Presentation]. https://www.osti.gov/biblio/1489043

Hoekstra, R.J. (2017). December 2017 ECP ST Project Review ECP Project WBS 2.3.2.04 ? SNL ATDM Tools [Presentation]. https://www.osti.gov/biblio/1488951

Silling, S.A. (2017). Nonlocality in modeling the physical world [Conference Poster]. https://www.osti.gov/biblio/1488952

Bertagna, L., Gunzburger, M., Hoffman, M., Perego, M., Price, S., & Price, S. (2017). Sensitivity analysis for the coupling of a subglacial hydrology model with a 3D ice-sheet model [Conference Poster]. https://www.osti.gov/biblio/1573888

Ren, H., Ray, J., Hou, Z., Huang, M., Bao, J., Swiler, L.P., & Swiler, L.P. (2017). Bayesian inversion of seismic and electromagnetic data for marine gas reservoir characterization using multi-chain Markov chain Monte Carlo sampling. Journal of Applied Geophysics, 147(C), pp. 68-80. https://doi.org/10.1016/j.jappgeo.2017.10.004

Perego, M., Barone, A., Hoffman, M., & Hoffman, M. (2017). Investigating an implicit thermo-mechanical model implemented in FELIX [Conference Poster]. https://www.osti.gov/biblio/1488907

Perego, M. (2017). Discretizations Product [Conference Poster]. https://www.osti.gov/biblio/1488906

Ray, J., Huang, M., Ren, H., Bao, J., Hou, Z., Swiler, L.P., & Swiler, L.P. (2017). Multi-chain Markov chain Monte Carlo methods for computationally expensive models [Conference Poster]. https://www.osti.gov/biblio/1488741

Schultz, P.A., Baczewski, A.D., Muller, R.P., Bachman, W.B., Bussmann, E., Simonson, R.J., & Simonson, R.J. (2017). Understanding phosphorus donor insertion on Si(001) from PH3 dissociation in dimer windows formed by hydrogen lithography [Conference Poster]. https://www.osti.gov/biblio/1488743

Brightwell, R.B., Olivier, S.L., & Olivier, S.L. (2017). December 2017 ECP ST Project Review: ECP Project WBS 2.3.1.15 (Qthreads) [Presentation]. https://www.osti.gov/biblio/1488744

Moon, C., Heath, J.E., Mitchell, S.A., & Mitchell, S.A. (2017). Statistical Inference for Porous Materials using Persistent Homology. https://doi.org/10.2172/1414662

Safta, C., Huan, X., Eldred, M., Geraci, G., & Geraci, G. (2017). Tackling High-Dimensionality and Computational Cost in Scramjet LES [Presentation]. https://www.osti.gov/biblio/1511975

Moreland, K., Pugmire, D., Geveci, B., & Geveci, B. (2017). ECP Milestone Report WBS 2.3.4.13 ECP/VTK-m FY18Q1 [MS-18/01-03] Multiblock / Gradients / Release STDA05-5. https://doi.org/10.2172/1414661

Mitchell, S.A., Mousley, S.C., Deakin, M., Knupp, P., & Knupp, P. (2017). Meshes optimized for discrete exterior calculus (DEC). https://doi.org/10.2172/1414659

Trask, N.A. (2017). Consistent and conservative meshfree discretization [Conference Poster]. https://www.osti.gov/biblio/1512053

Trask, N.A., You, H., Yu, Y., Parks, M.L., & Parks, M.L. (2017). Asymptotically compatible meshfree discretization [Conference Poster]. https://www.osti.gov/biblio/1512052

Littlewood, D.J. (2017). Introduction to Peridynamic Modeling and Applications [Conference Poster]. https://www.osti.gov/biblio/1511976

Gorodetsky, A.A., Karaman, S., Marzouk, Y., & Marzouk, Y. (2017). Low-rank Tensor Integration for Gaussian Filtering of Continuous TIme Nonlinear Systems [Conference Poster]. https://doi.org/10.1109/CDC.2017.8264064

Klise, K.A., Nicholson, B.L., Laird, C., Ravikumar, A., Brandt, A., & Brandt, A. (2017). Optimization of Emissions SENSOR NETWORKS INCORPORATING TRADEOFFS BETWEEN SENSOR TECHNOLOGIES [Conference Poster]. https://www.osti.gov/biblio/1488340

Kouri, D.P., Aquino, W., Zou, Z., & Zou, Z. (2017). A Locally Adapted Reduced Basis Method for Solving Risk-Averse PDE-Constrained Optimization Problems [Conference Poster]. https://www.osti.gov/biblio/1573887

Eldred, M., Geraci, G., Menhorn, F., Marzouk, Y., & Marzouk, Y. (2017). Tutorial on Optimization Under Uncertainty with Application to Scramjet Design [Presentation]. https://www.osti.gov/biblio/1488337

Berry, J. (2017). Benchmarking for High-Performance Data Analysis [Presentation]. https://www.osti.gov/biblio/1485719

Edwards, H.C. (2017). Kokkos Tutorial [Presentation]. https://www.osti.gov/biblio/1503431

Rodrigues, A., Frank, M.P., & Frank, M.P. (2017). Challenges & Roadmap for Beyond CMOS Computing Simulation. https://doi.org/10.2172/1413668

Lyke, J., Mee, J., Edwards, A., Pineda, A., Debenedictis, E., Frank, M.P., & Frank, M.P. (2017). On the energy consequences of information for spacecraft systems [Conference Poster]. 2017 IEEE International Conference on Wireless for Space and Extreme Environments, WiSEE 2017. https://doi.org/10.1109/WiSEE.2017.8124901

Hill, A., Donaldson, J.W., Rothganger, F., Vineyard, C.M., Follett, D.R., Follett, P.L., Smith, M.R., Verzi, S.J., Severa, W., Wang, F., Aimone, J.B., Naegle, J.H., James, C.D., & James, C.D. (2017). A spike-Timing neuromorphic architecture [Conference Poster]. 2017 IEEE International Conference on Rebooting Computing, ICRC 2017 - Proceedings. https://doi.org/10.1109/ICRC.2017.8123631

Frank, M.P. (2017). Asynchronous Ballistic Reversible Computing [Conference Poster]. 2017 IEEE International Conference on Rebooting Computing, ICRC 2017 - Proceedings. https://doi.org/10.1109/ICRC.2017.8123659

Frank, M.P. (2017). Asynchronous Ballistic Reversible Computing [Conference Poster]. 2017 IEEE International Conference on Rebooting Computing, ICRC 2017 - Proceedings. https://doi.org/10.1109/ICRC.2017.8123659

Stelle, G., Moses, W.S., Olivier, S.L., McCormick, P., & McCormick, P. (2017). OpenMPIR: Implementing OpenMP tasks with tapir [Conference Poster]. Proceedings of LLVM-HPC 2017: 4th Workshop on the LLVM Compiler Infrastructure in HPC - Held in conjunction with SC 2017: The International Conference for High Performance Computing, Networking, Storage and Analysis. https://doi.org/10.1145/3148173.3148186

Lawson, M., Lofstead, G.F., Levy, S.L.N., Widener, P., Ulmer, C.D., Mukherjee, S., Templet, G.J., Kordenbrock, T., & Kordenbrock, T. (2017). EMPRESS-Extensible metadata provider for extreme-scale scientific simulations [Conference Poster]. Proceedings of PDSW-DISCS 2017 - 2nd Joint International Workshop on Parallel Data Storage and Data Intensive Scalable Computing Systems - Held in conjunction with SC 2017: The International Conference for High Performance Computing, Networking, Storage and Analysis. https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85045872946&origin=inward

Kim, K., Costa, T.B., Deveci, M., Bradley, A.M., Hammond, S., Guney, M.E., Knepper, S., Story, S., Rajamanickam, S., & Rajamanickam, S. (2017). Designing vector-friendly compact BLAS and LAPACK kernels [Conference Poster]. Proceedings of the International Conference for High Performance Computing, Networking, Storage and Analysis, SC 2017. https://doi.org/10.1145/3126908.3126941

Parks, M.L. (2017). PDLAMMPS: Peridynamics in LAMMPS [Conference Poster]. https://www.osti.gov/biblio/1484933

Aimone, J.B., Severa, W., & Severa, W. (2017). Context-modulation of hippocampal dynamics and deep convolutional networks [Conference Poster]. https://www.osti.gov/biblio/1484567

Rajamanickam, S., Bradley, A.M., Deveci, M., Hoemmen, M.F., Hammond, S., Kim, K., Trott, C.R., & Trott, C.R. (2017). KokkosKernels: Performance-Portable Sparse Dense and Graph Kernels [Presentation]. https://www.osti.gov/biblio/1484925

Rajamanickam, S., Thornquist, H., Booth, J., & Booth, J. (2017). Basker : A Threaded Sparse LU factorization utilizing Hierarchical Parallelism and Data Layouts [Conference Poster]. https://www.osti.gov/biblio/1484926

Moreland, K. (2017). VTK-m: Visualization on Modern Processors [Presentation]. https://www.osti.gov/biblio/1511135

Massad, J., Bachman, W.B., Hart, J.L., & Hart, J.L. (2017). Mathematics and Statistics at Sandia National Laboratories: Perspectives from an Engineering Scientist Analyst and Student Intern [Presentation]. https://www.osti.gov/biblio/1511133

Doak, J.E., Ingram, J.B., Mulder, S.A., Naegle, J.H., Cox, J.A., Aimone, J.B., Dixon, K.R., James, C.D., Follet, D.R., & Follet, D.R. (2017). Tracking Cyber Adversaries with Adaptive Indicators of Compromise [Conference Poster]. https://doi.org/10.1109/CSCI.2017.2

Olivier, S.L. (2017). OpenMP Tasks: New Features for TR6 / 5.0 [Conference Poster]. https://www.osti.gov/biblio/1511126

Thompson, A.P., Trott, C.R., & Trott, C.R. (2017). A Brief Description of the Kokkos implementation of the SNAP potential in ExaMiniMD. https://doi.org/10.2172/1409290

Heroux, M.A. (2017). Research Methods [Conference Poster]. https://www.osti.gov/biblio/1482488

Heroux, M.A. (2017). Better Scientific Software [Conference Poster]. https://www.osti.gov/biblio/1482489

Heroux, M.A. (2017). Numerical Linear Algebra Tutorial [Conference Poster]. https://www.osti.gov/biblio/1482490

Romero, V., Bonney, M., Schroeder, B., Weirs, G., & Weirs, G. (2017). Evaluation of a Class of Simple and Effective Uncertainty Methods for Sparse Samples of Random Variables and Functions. https://doi.org/10.2172/1409725

Slota, G., Rajamanickam, S., Devine, K., Madduri, K., & Madduri, K. (2017). Partitioning Trillion-edge Graphs in Minutes [Conference Poster]. https://doi.org/10.1109/IPDPS.2017.95

Taylor, M.A. (2017). Exascale Earth System Modeling [Presentation]. https://www.osti.gov/biblio/1482483

Rajamanickam, S., Story, S., Knepper, S., Guney, M., Hammond, S., Bradley, A.M., Deveci, M., Costa, T., Kim, K., & Kim, K. (2017). Designing Vector-Friendly Compact BLAS and LAPACK Kernels [Conference Poster]. https://www.osti.gov/biblio/1503430

Berger-Vergiat, L. (2017). Structured grid algorithms in MueLu [Presentation]. https://www.osti.gov/biblio/1482314

Turner, D.Z. (2017). Are we over-confident in the accuracy of our DIC measurements? [Conference Poster]. https://www.osti.gov/biblio/1510658

Markosyan, A., Bettencourt, M.T., Bennett, J., Lifflander, J., Hollman, D.S., Wilke, J., Kolla, H., Moore, C.H., Clay, R.L., & Clay, R.L. (2017). Particle in Cell Algorithms and Codes Toward the Next Generation Architectures [Conference Poster]. https://www.osti.gov/biblio/1510704

Ober, C.C., Pawlowski, R., Tezaur, I.K., Conde, S., Cyr, E.C., & Cyr, E.C. (2017). Tempus Time-Integration Package [Presentation]. https://www.osti.gov/biblio/1510906

Ibanez-Granados, D.A., Edwards, H.C., & Edwards, H.C. (2017). Alexa: Simulating Shock Hydrodynamics on the GPU using Kokkos [Conference Poster]. https://www.osti.gov/biblio/1510909

Siirola, J.D. (2017). Process Design and the EO Utopia [Conference Poster]. https://www.osti.gov/biblio/1510905

Silling, S.A. (2017). Attenuation of waves in a peridynamic medium [Conference Poster]. https://www.osti.gov/biblio/1510903

Cheung, J., Frischknecht, A.L., Perego, M., Bochev, P., & Bochev, P. (2017). A hybrid, coupled approach for modeling charged fluids from the nano to the mesoscale. Journal of Computational Physics, 348(C), pp. 364-384. https://doi.org/10.1016/j.jcp.2017.07.030

Glusa, C., Ainsworth, M., & Ainsworth, M. (2017). Adaptive FEM for the fractional Laplacian [Conference Poster]. https://www.osti.gov/biblio/1573778

mc Jones, E., Carroll, J.D., Karlson, K.N., Kramer, S., Lehoucq, R.B., Reu, P.L., Turner, D.Z., & Turner, D.Z. (2017). Identification of Viscoplastic Model Parameters for 304L Stainless Steel using the Virtual Fields Method [Conference Poster]. https://www.osti.gov/biblio/1510659

Phipps, E.T., Kim, K., Rajamanickam, S., Tupek, M.R., & Tupek, M.R. (2017). SIMD Scalar Types for Outer-loop Vectorization [Presentation]. https://www.osti.gov/biblio/1481481

Peterson, M.G., Stracuzzi, D.J., Vollmer, C., & Vollmer, C. (2017). Change Point Uncertainty Quantification: First Arrival Picks for Seismic Signals [Conference Poster]. https://www.osti.gov/biblio/1481487