Patrick Finley
R&D S&E, Computer Science
R&D S&E, Computer Science
Biography
Patrick Finley is a Principal Member of Technical Staff at Sandia National Laboratories in Computer Science Research and Development. In the commercial software arena, he has developed large engineering analysis systems currently used by a variety of Fortune 500 firms and government agencies. At Sandia, he designs and codes complex adaptive system models, develops experimental design protocols, integrates High Performance Computing (HPC) resources, and has developed innovative approaches to uncertainty quantification. Short CV;
Publications
Drew Levin, Carianne Martinez, Jessica Jones, Patrick Finley, (2021). Longitudinal Suicide Risk Prediction and Interpretation with Deep Neural Networks and Shapely Additive Explanations https://doi.org/10.2172/1888997 Publication ID: 79273
Katherine Klise, Walter Beyeler, Patrick Finley, Monear Makvandi, (2021). Analysis of mobility data to build contact networks for COVID-19 PLoS ONE https://doi.org/10.1371/journal.pone.0249726 Publication ID: 77977
Patrick Finley, (2021). COVID-19 Modeling https://www.osti.gov/servlets/purl/1847238 Publication ID: 77296
Sean DeRosa, Patrick Finley, (2020). COVID-19 Pandemic Modeling Phase 2 Project Final Report https://www.osti.gov/servlets/purl/1830985 Publication ID: 71309
Sean DeRosa, Patrick Finley, Melissa Finley, Walter Beyeler, Daniel Krofcheck, Christopher Frazier, Laura Swiler, Teresa Portone, Erin Acquesta, Paula Austin, Drew Levin, Robert Taylor, Katherine Tremba, Monear Makvandi, Ann Hammer, Chad Davis, (2020). COVID-19 Medical Resource Demands https://www.osti.gov/servlets/purl/1807655 Publication ID: 74013
Vanessa Vargas, Patrick Finley, (2020). Epidemiological and Economic Modeling of a Pandemic https://www.osti.gov/servlets/purl/1773274 Publication ID: 73148
Raga Krishnakumar, Callie Boskin, Drew Levin, Daniel Carmody, Patrick Finley, Stephen Verzi, Kelly Williams, James Carney, (2019). Data Science for Detection of Genome Editi https://www.osti.gov/servlets/purl/1645734 Publication ID: 70337
Tatiana Flanagan, Walter Beyeler, Drew Levin, Patrick Finley, Melanie Moses, (2019). Movement and spatial specificity support scaling in ant colonies and immune systems: Application to national biosurveillance Springer Proceedings in Complexity https://www.osti.gov/servlets/purl/1641321 Publication ID: 70035
Drew Levin, Patrick Finley, (2018). Machine Learning Techniques to Improve National Biosurveillance https://www.osti.gov/servlets/purl/1761152 Publication ID: 60515
Patrick Finley, Patrick Finley, Patrick Finley, Patrick Finley, Drew Levin, Drew Levin, Drew Levin, Drew Levin, Tatiana Flanagan, Tatiana Flanagan, Tatiana Flanagan, Tatiana Flanagan, Walter Beyeler, Walter Beyeler, Walter Beyeler, Walter Beyeler, Michael Mitchell, Michael Mitchell, Michael Mitchell, Michael Mitchell, Jaideep Ray, Jaideep Ray, Jaideep Ray, Jaideep Ray, Melanie Moses, Melanie Moses, Melanie Moses, Melanie Moses, Stephanie Forrest, Stephanie Forrest, Stephanie Forrest, Stephanie Forrest, (2018). Biologically inspired approaches for biosurveillance anomaly detection and data fusion https://doi.org/10.2172/1489542 Publication ID: 60662
Drew Levin, Patrick Finley, (2018). Synthetic data generators for the evaluation of biosurveillance outbreak detection algorithms https://doi.org/10.2172/1481598 Publication ID: 59505
Susan Lacy, Patrick Finley, (2018). Transportation Modeling and Global Health https://doi.org/10.2172/1468384 Publication ID: 63935
Walter Beyeler, Patrick Finley, (2018). Laboratory Infrastructure Network Analysis (LINA) – Architecture and Schema https://www.osti.gov/servlets/purl/1571376 Publication ID: 63410
Drew Levin, Patrick Finley, (2018). Time Aware RNNs for Medical Risk Prediction https://www.osti.gov/servlets/purl/1574259 Publication ID: 63487
Drew Levin, Melanie Moses, Tatiana Flanagan, Stephanie Forrest, Patrick Finley, (2018). Negative selection based anomaly detector for multimodal health data 2017 IEEE Symposium Series on Computational Intelligence, SSCI 2017 – Proceedings https://doi.org/10.1109/SSCI.2017.8285356 Publication ID: 53333
Walter Beyeler, Patrick Finley, Alex Walser, Michael Mitchell, Christopher Frazier, (2017). Resilience in Disease Outbreak Response: Modeling Medical Laboratory Networks in Developing Countries https://www.osti.gov/servlets/purl/1471956 Publication ID: 58518
Drew Levin, Patrick Finley, (2017). Evaluating Text Embedding Schemes for Medical Chief Complaint Classification https://www.osti.gov/servlets/purl/1464712 Publication ID: 57909
Benjamin Brodsky, Patrick Finley, Jennifer Gaudioso, (2017). Global Health Security: Insights from Sandia?s Recent Experience in West Africa https://www.osti.gov/servlets/purl/1431744 Publication ID: 56741
Patrick Finley, Richard Hopkins, Catherine Tong, Howard Burkom, Judy Akkina, John Berezowski, Mika Shigematsu, Ian Painter, Roland Gamache, Victor Del Rio Vilas, Laura Streichert, (2017). A practitioner-driven research agenda for syndromic surveillance Online Journal of Public Health Informatics https://doi.org/10.5210/ojphi.v9i1.7762 Publication ID: 54189
Eric Vugrin, Timothy Trucano, Laura Swiler, Patrick Finley, Tatiana Flanagan, Asmeret Naugle, Jeffrey Tsao, Stephen Verzi, (2017). Recommended Research Directions for Improving the Validation of Complex Systems Models https://doi.org/10.2172/1367494 Publication ID: 54940
Patrick Finley, Mercy DeMenno, Walter Beyeler, Tamar Wyte-Lake, Aram Dobalian, (2016). Improving veterans’ access to influenza vaccination: Modeling effectiveness of public-private partnerships https://www.osti.gov/servlets/purl/1422110 Publication ID: 47983
Walter Beyeler, Patrick Finley, William Arndt, Alex Walser, Michael Mitchell, (2016). Biosecurity through Public Health System Design https://doi.org/10.2172/1333488 Publication ID: 47865
Jaideep Ray, Sophia Lefantzi, Joshua Bauer, Mohammad Khalil, Andrew Rothfuss, Katherine Cauthen, Patrick Finley, Halley Smith, (2016). Online mapping and forecasting of epidemics using open-source indicators https://doi.org/10.2172/1562406 Publication ID: 52362
Gregory Lambert, Patrick Finley, Nancy Brodsky, (2016). Dynamic Social Network Analysis of Tobacco Behavior https://www.osti.gov/servlets/purl/1420272 Publication ID: 50000
Walter Beyeler, Patrick Finley, (2015). Sample Transport Tool https://www.osti.gov/servlets/purl/1338276 Publication ID: 42076
Daniel Pless, Munaf Aamir, Walter Beyeler, Nancy Brodsky, Patrick Finley, Jared Gearhart, Sarah Maffitt, (2015). Comparing Consequences of Travel Restriction Policies https://www.osti.gov/servlets/purl/1338280 Publication ID: 42083
Katherine Cauthen, Gregory Lambert, Patrick Finley, David Ross, Maggie Chartier, Victoria Davey, (2015). A Bayesian Meta-Analysis of the Effect of Alcohol Use on HCV-Treatment Outcomes with a Comparison of Resampling Methods to Assess Uncertainty in Parameter Estimates Sandia journal manuscript; Not yet accepted for publication https://www.osti.gov/servlets/purl/1427279 Publication ID: 45849
Katherine Cauthen, Gregory Lambert, Patrick Finley, David Ross, Maggie Chartier, Victoria Davey, (2015). A Bayesian Meta-Analysis of the Effect of Alcohol Use on HCV-Treatment Outcomes with a Comparison of Resampling Methods to Assess Uncertainty in Parameter Estimates https://www.osti.gov/servlets/purl/1289564 Publication ID: 44931
Patrick Finley, Eric Vugrin, Stephen Verzi, Mark Turnquist, Anne Griffin, Karen Ricci, Tamar Wyte-Lake, (2015). Modeling Hospital Evacuations for Infrastructure Disruptions https://www.osti.gov/servlets/purl/1331571 Publication ID: 44088
Gregory Lambert, Jaideep Ray, Sophia Lefantzi, Patrick Finley, Halley Smith, (2015). Forecasting Dengue Incidence from Social Media using Meteorological Covariates https://www.osti.gov/servlets/purl/1253080 Publication ID: 43392
Thomas Moore, Patrick Finley, Benjamin Apelberg, Bridget Ambrose, Nancy Brodsky, Theresa Brown, Corinne Husten, Robert Glass, (2015). An opinion-driven behavioral dynamics model for addictive behaviors European Physical Journal B https://doi.org/10.1140/epjb/e2015-40462-y Publication ID: 37210
Sophia Lefantzi, Jaideep Ray, Gregory Lambert, Patrick Finley, Halley Smith, (2015). Forecasting influenza activity using meteorological and Google Flu Trends data https://www.osti.gov/servlets/purl/1251370 Publication ID: 43273
Theresa Brown, Eric Vugrin, Vincent Tidwell, Stephen Verzi, Thomas Moore, Patrick Finley, Walter Beyeler, Thomas Corbet, (2015). Complex System Analytics: presentations to External Advisory Panel https://www.osti.gov/servlets/purl/1247089 Publication ID: 42410
Eric Vugrin, Stephen Verzi, Patrick Finley, Mark Turnquist, Anne Griffin, Karen Ricci, Tamar Wyte-Lake, (2015). Modeling Evacuation of a Hospital without Electric Power Prehospital and Disaster Medicine https://www.osti.gov/biblio/1146807 Publication ID: 41087
Eric Vugrin, Stephen Verzi, Patrick Finley, Mark Turnquist, Tamar Wyte-Lake, Ann Griffin, Karen Ricci, Rachel Plotinsky, (2015). Resource Requirements Planning for Hospitals Treating Serious Infectious Disease Cases https://doi.org/10.2172/1171661 Publication ID: 42234
Patrick Finley, Monear Makvandi, Jennifer Gaudioso, (2014). Systems Modeling of Sample Transport for Liberia https://www.osti.gov/servlets/purl/1504060 Publication ID: 39856
Patrick Finley, Thomas Moore, Nancy Brodsky, Gregory Lambert, (2014). Opinion-Driven Behavioral Dynamics Model of Tobacco Product Use: Results and Validation https://www.osti.gov/servlets/purl/1497355 Publication ID: 37949
Nancy Brodsky, Theresa Brown, Thomas Moore, Patrick Finley, (2014). Using SnapDragon to Examine a Two-Tobacco-Product System: The Potential Impact of Risk Perception on Tobacco Use Prevalence https://www.osti.gov/servlets/purl/1497449 Publication ID: 37438
Sophia Lefantzi, Jaideep Ray, Gregory Lambert, Patrick Finley, Halley Smith, (2014). Disease forecasting using open-source indicators https://www.osti.gov/servlets/purl/1146950 Publication ID: 41035
Patrick Finley, Nancy Brodsky, Theresa Brown, Gregory Lambert, (2014). SnapDragon: A Social-Network Behavioral Dynamics Model of Tobacco Product Use https://www.osti.gov/servlets/purl/1731106 Publication ID: 40456
Nancy Brodsky, Theresa Brown, Stephen Verzi, Eric Vugrin, Patrick Finley, (2014). Tobacco-Control Regulatory Policy Modeling and Analysis https://www.osti.gov/servlets/purl/1706361 Publication ID: 40478
Patrick Finley, Nancy Brodsky, Theresa Brown, Gregory Lambert, (2014). SnapDragon: A Social-Network Behavioral Dynamics Model of Tobacco Product Use https://www.osti.gov/servlets/purl/1143246 Publication ID: 40492
Patrick Finley, (2014). Disease and Resilience Modeling to Support Public Health https://www.osti.gov/servlets/purl/1706553 Publication ID: 40582
Patrick Finley, Gregory Lambert, Andrew Huff, (2013). Ranking Pandemic //interventions via Multilevel Sensitivity Analysis of Model Results https://www.osti.gov/servlets/purl/1115067 Publication ID: 36052
Patrick Finley, (2013). Modeling Hepatitis C treatment policy https://doi.org/10.2172/1096266 Publication ID: 35871
Walter Beyeler, Mercy DeMenno, Patrick Finley, (2013). Modeling veterans healthcare administration disclosure processes : https://doi.org/10.2172/1096264 Publication ID: 35929
Katherine Jones, Patrick Finley, Alisa Bandlow, Richard Detry, (2013). Varicella infection modeling https://doi.org/10.2172/1096254 Publication ID: 35966
Patrick Finley, Gregory Lambert, Taylor Berger, Nancy Brodsky, (2013). Opinion Dynamics Modeling in Tobacco Control Policy https://www.osti.gov/servlets/purl/1106386 Publication ID: 34915
Gregory Lambert, Patrick Finley, (2013). Social Network Analysis of Peer Influence on Adolescent Smoking https://www.osti.gov/servlets/purl/1115261 Publication ID: 34791
Walter Beyeler, Patrick Finley, (2013). Modeling Animal Movement to Help Control PPRUpdate and Information Needs https://www.osti.gov/servlets/purl/1661377 Publication ID: 34077
Patrick Finley, Nancy Brodsky, (2013). Modeling Education and Advertising With Opinion Dynamics Physica A https://www.osti.gov/biblio/1079180 Publication ID: 33564
Patrick Finley, Walter Beyeler, (2013). Modeling for Disease Control Policy https://www.osti.gov/servlets/purl/1145230 Publication ID: 32146
Walter Beyeler, Chrys Watson Ross, Patrick Finley, (2013). Modeling Animal Movement to Help Control PPR https://www.osti.gov/biblio/1062829 Publication ID: 31638
Patrick Finley, Robert Glass, Ryan Hammer, (2012). The Role of Community Structure in Opinion Cluster Formation https://www.osti.gov/biblio/1062926 Publication ID: 31166
Patrick Finley, James Ramsey, (2012). User’s manual for the BROOM decision support system https://doi.org/10.2172/1055612 Publication ID: 30218
Patrick Finley, Gregory Lambert, Robert Glass, (2012). Modeling Hepatitis C https://www.osti.gov/biblio/1072598 Publication ID: 30555
Patrick Finley, Katherine Jones, (2012). Mitigating Infectious Disease Outbreaks in Medical Facilities with Incomplete Vaccination https://www.osti.gov/biblio/1062350 Publication ID: 30602
Patrick Finley, Nancy Brodsky, (2012). Using opinion dynamics to model addictive behaviors Physica A https://www.osti.gov/biblio/1104773 Publication ID: 29934
Thomas Moore, Patrick Finley, Ryan Hammer, Robert Glass, (2012). Opinion dynamics in gendered social networks: An examination of female engagement teams in Afghanistan Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) https://www.osti.gov/servlets/purl/1118420 Publication ID: 25439
Walter Beyeler, Andjelka Kelic, Patrick Finley, Munaf Aamir, Alexander Outkin, Stephen Conrad, Michael Mitchell, Vanessa Vargas, (2012). Creating interaction environments: Defining a two-sided market model of the development and dominance of platforms Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) https://www.osti.gov/servlets/purl/1111591 Publication ID: 25440
Patrick Finley, Ryan Hammer, Robert Glass, (2012). Opinion Dynamics in Gendered Social Networks: An Analysis of Female Engagement Teams in Afghanistan https://www.osti.gov/biblio/1068337 Publication ID: 27502
John Linebarger, Richard Detry, Robert Glass, Walter Beyeler, Arlo Ames, Patrick Finley, (2012). Complex Adaptive Systems of Systems (CASOS) engineering environment https://doi.org/10.2172/1038222 Publication ID: 26647
Janis Schubert, Patrick Finley, Ryan Hammer, Robert Glass, (2012). MODELING TRIBAL LEADERSHIP DYNAMICS: AN OPINION DYNAMICS MODEL OF PASHTUN LEADERSHIP SELECTION Proposed for publication in Journal of Intelligence Community Research and Development. https://www.osti.gov/biblio/1062790 Publication ID: 26007
Walter Beyeler, Arlo Ames, Theresa Brown, Nancy Brodsky, Patrick Finley, John Linebarger, (2012). Complex Adaptive Systems of Systems (CASoS) engineering and foundations for global design https://doi.org/10.2172/1035333 Publication ID: 26074
Walter Beyeler, Robert Glass, Patrick Finley, Tu Quach, (2011). A general model of resource production and exchange in systems of interdependent specialists https://doi.org/10.2172/1031298 Publication ID: 25484
Patrick Finley, (2011). CASoS Engineering using Opinion Dynamics on Social Networks https://www.osti.gov/servlets/purl/1118709 Publication ID: 24381
Patrick Finley, Theresa Brown, Aldo Zagonel, Robert Glass, (2011). A Multi-scale Paradigm to Design Policy Options for Obesity Prevention: Exploring the Integration of Individual-Based Modeling and System Dynamics https://www.osti.gov/servlets/purl/1143469 Publication ID: 24168
Janis Schubert, Patrick Finley, Ryan Hammer, Robert Glass, (2011). MODELING TRIBAL LEADERSHIP DYNAMICS: AN OPINION DYNAMICS MODEL OF PASHTUN LEADERSHIP SELECTION https://www.osti.gov/servlets/purl/1120343 Publication ID: 23189
Walter Beyeler, Robert Glass, Patrick Finley, Theresa Brown, (2011). Modeling Systems of Interacting Specialists https://www.osti.gov/servlets/purl/1106136 Publication ID: 23238
Patrick Finley, Robert Glass, Arlo Ames, Leland Evans, Daniel Cannon, Jacob Hobbs, Jacob Hobbs, (2011). Integrating Uncertainty Analysis into Complex-System Modeling for Effective Public Policy I: Preliminary Findings https://www.osti.gov/servlets/purl/1106283 Publication ID: 22816
Patrick Finley, Robert Glass, Theresa Brown, Aldo Zagonel, (2011). A Multiscale Paradigm Combining Individual-Based Modeling and System Dynamics to Design Policy Options for Obesity Problem https://www.osti.gov/servlets/purl/1120402 Publication ID: 22702
Patrick Finley, John Linebarger, Walter Beyeler, Robert Glass, (2011). Analyzing Public Health Care as a Complex Adaptive System of Systems https://www.osti.gov/servlets/purl/1106578 Publication ID: 22703
Patrick Finley, John Linebarger, Alexander Outkin, Stephen Verzi, Nancy Brodsky, Robert Glass, (2011). Extending Opinion Dynamics to Model Public Health Problems and the Evaluation of Policy Interventions https://www.osti.gov/servlets/purl/1106717 Publication ID: 22704
Nancy Brodsky, Arlo Ames, Robert Glass, Theresa Brown, Patrick Finley, John Linebarger, Aldo Zagonel, (2011). Application of Complex Adaptive Systems of Systems Engineering to Tobacco Products https://www.osti.gov/servlets/purl/1106896 Publication ID: 22733
Robert Glass, Aldo Zagonel, Arlo Ames, Theresa Brown, Walter Beyeler, Patrick Finley, John Linebarger, Nancy Brodsky, Stephen Verzi, Alexander Outkin, (2011). Complex Adaptive Systems of Systems (CASoS) Engineering: Mapping Aspirations to Problem Solutions https://www.osti.gov/servlets/purl/1106542 Publication ID: 22783
Patrick Finley, John Linebarger, Alexander Outkin, Stephen Verzi, Nancy Brodsky, Daniel Cannon, Robert Glass, (2011). Extending Opinion Dynamics to Model Public Health Problems and the Evaluation of Policy Interventions https://www.osti.gov/servlets/purl/1120573 Publication ID: 22296
Robert Glass, Walter Beyeler, Arlo Ames, Patrick Finley, John Linebarger, (2011). Introduction to Complex Adaptive Systems-of-Systems (CASoS) Engineering https://www.osti.gov/servlets/purl/1120627 Publication ID: 21820
Patrick Finley, (2011). Policy Analysis with Agents and Social Networks Using Opinion Dynamics (Example for use of an unhealthy product) https://www.osti.gov/servlets/purl/1671554 Publication ID: 21970
Patrick Finley, (2011). Evaluation of policy options using uncertainty analysis of complex-system model results https://www.osti.gov/servlets/purl/1671650 Publication ID: 21770
John Linebarger, Patrick Finley, Walter Beyeler, Robert Glass, (2010). Veterans affairs modeling : object oriented simulation environment : a complex adaptive systems modeling framework for public health action https://www.osti.gov/biblio/1035630 Publication ID: 21009
Robert Glass, Walter Beyeler, Arlo Ames, Patrick Finley, (2010). Defining & evaluating threats and designing mitigation strategies for VA healthcare https://www.osti.gov/biblio/1035636 Publication ID: 20908
Wayne Einfeld, Mark Tucker, Lynn Yang, David Franco, Donna Edwards, Karim Mahrous, Zach Heath, Patrick Finley, (2010). Decision support tools for restoration and recovery following WMD events https://www.osti.gov/biblio/988504 Publication ID: 17422
Patrick Finley, (2009). The BROOM System https://www.osti.gov/servlets/purl/1141593 Publication ID: 16947
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